BLASTX nr result

ID: Panax21_contig00033169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033169
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17513.3| unnamed protein product [Vitis vinifera]              287   1e-75
ref|XP_002266705.1| PREDICTED: nucleolar protein 6-like [Vitis v...   287   1e-75
ref|XP_002529156.1| nucleolar RNA-associated protein, putative [...   276   4e-72
ref|XP_004140630.1| PREDICTED: nucleolar protein 6-like [Cucumis...   263   4e-68
ref|XP_002886383.1| hypothetical protein ARALYDRAFT_474974 [Arab...   263   4e-68

>emb|CBI17513.3| unnamed protein product [Vitis vinifera]
          Length = 1066

 Score =  287 bits (735), Expect = 1e-75
 Identities = 140/206 (67%), Positives = 164/206 (79%), Gaps = 1/206 (0%)
 Frame = -3

Query: 736  AMFLATSYDKVSESWTKSSPNSLELRRLAAYARSSSNLLTKLIMQDQHDSYGWECIFRTP 557
            AMFLAT+YDK SE+WT+ SPNS ELRRL AYARSS+NLLTKLI+  Q DSY WEC+FRTP
Sbjct: 859  AMFLATAYDKASEAWTRFSPNSSELRRLVAYARSSANLLTKLILGGQIDSYKWECLFRTP 918

Query: 556  LNNYDAVILLHRENLPYPERLLFPSELNQGKQLVCGKPSKLFHPFVMPGDLKANIEEHRR 377
            LNNYDAVILLHRE +PYP+RLLFPSE+NQGK +  G  SK FHPF++P  +K N  + + 
Sbjct: 919  LNNYDAVILLHREKMPYPQRLLFPSEMNQGKHVAQGNASKAFHPFLLPEHMKGNSPDLKD 978

Query: 376  KLMVDFDPLRCFIKDLERRFPDMLKVWYDSLGGDAIGVTWEKEGLKKRGRDVVG-EGKEL 200
             L+VDFDPLRCFI DLE  FP+  K+WYDSLGGDAIG+ WE+   KKRGR     E K+ 
Sbjct: 979  TLLVDFDPLRCFIGDLEEEFPNAFKLWYDSLGGDAIGMMWERSSSKKRGRSEENEEEKDP 1038

Query: 199  LDELKAVGDVGKGFVRSIYSLKVPRL 122
            ++ LKAVG+VGKGFVRSIY LK PRL
Sbjct: 1039 VNVLKAVGEVGKGFVRSIYLLKSPRL 1064


>ref|XP_002266705.1| PREDICTED: nucleolar protein 6-like [Vitis vinifera]
          Length = 1057

 Score =  287 bits (735), Expect = 1e-75
 Identities = 140/206 (67%), Positives = 164/206 (79%), Gaps = 1/206 (0%)
 Frame = -3

Query: 736  AMFLATSYDKVSESWTKSSPNSLELRRLAAYARSSSNLLTKLIMQDQHDSYGWECIFRTP 557
            AMFLAT+YDK SE+WT+ SPNS ELRRL AYARSS+NLLTKLI+  Q DSY WEC+FRTP
Sbjct: 850  AMFLATAYDKASEAWTRFSPNSSELRRLVAYARSSANLLTKLILGGQIDSYKWECLFRTP 909

Query: 556  LNNYDAVILLHRENLPYPERLLFPSELNQGKQLVCGKPSKLFHPFVMPGDLKANIEEHRR 377
            LNNYDAVILLHRE +PYP+RLLFPSE+NQGK +  G  SK FHPF++P  +K N  + + 
Sbjct: 910  LNNYDAVILLHREKMPYPQRLLFPSEMNQGKHVAQGNASKAFHPFLLPEHMKGNSPDLKD 969

Query: 376  KLMVDFDPLRCFIKDLERRFPDMLKVWYDSLGGDAIGVTWEKEGLKKRGRDVVG-EGKEL 200
             L+VDFDPLRCFI DLE  FP+  K+WYDSLGGDAIG+ WE+   KKRGR     E K+ 
Sbjct: 970  TLLVDFDPLRCFIGDLEEEFPNAFKLWYDSLGGDAIGMMWERSSSKKRGRSEENEEEKDP 1029

Query: 199  LDELKAVGDVGKGFVRSIYSLKVPRL 122
            ++ LKAVG+VGKGFVRSIY LK PRL
Sbjct: 1030 VNVLKAVGEVGKGFVRSIYLLKSPRL 1055


>ref|XP_002529156.1| nucleolar RNA-associated protein, putative [Ricinus communis]
            gi|223531380|gb|EEF33215.1| nucleolar RNA-associated
            protein, putative [Ricinus communis]
          Length = 1046

 Score =  276 bits (705), Expect = 4e-72
 Identities = 132/205 (64%), Positives = 166/205 (80%)
 Frame = -3

Query: 736  AMFLATSYDKVSESWTKSSPNSLELRRLAAYARSSSNLLTKLIMQDQHDSYGWECIFRTP 557
            +MFLATSYDK SE+WT+ SPNSLEL+RL AYARSSSNLLT+L ++DQ DSY WEC+FRTP
Sbjct: 844  SMFLATSYDKASEAWTEISPNSLELKRLVAYARSSSNLLTRLALEDQTDSYSWECLFRTP 903

Query: 556  LNNYDAVILLHRENLPYPERLLFPSELNQGKQLVCGKPSKLFHPFVMPGDLKANIEEHRR 377
            LNNYDAVILLH + LPYP+RLLFPS+LNQG+ +  G  +K F PF++PGDL+ + E+ + 
Sbjct: 904  LNNYDAVILLHGDRLPYPQRLLFPSQLNQGRLVAHGSATKAFQPFILPGDLRGSSEKLKE 963

Query: 376  KLMVDFDPLRCFIKDLERRFPDMLKVWYDSLGGDAIGVTWEKEGLKKRGRDVVGEGKELL 197
            KLMV+FDPLRC+I DL+    + LK+WYDSLGGDAIG+TW+    KKR RD   EG++ +
Sbjct: 964  KLMVNFDPLRCYIADLQEEC-NTLKLWYDSLGGDAIGLTWD---TKKRQRDKENEGEDPI 1019

Query: 196  DELKAVGDVGKGFVRSIYSLKVPRL 122
              LKA G+VGKGFV+S++ LK PRL
Sbjct: 1020 SLLKAAGEVGKGFVKSVHFLKAPRL 1044


>ref|XP_004140630.1| PREDICTED: nucleolar protein 6-like [Cucumis sativus]
          Length = 831

 Score =  263 bits (671), Expect = 4e-68
 Identities = 129/207 (62%), Positives = 161/207 (77%), Gaps = 2/207 (0%)
 Frame = -3

Query: 736  AMFLATSYDKVSESWTKSSPNSLELRRLAAYARSSSNLLTKLIMQDQHDSYGWECIFRTP 557
            AMFLAT+YDK SE+WTK SP   EL+RLAAYARSS++LLT+L++Q Q DS  WE +FRTP
Sbjct: 623  AMFLATAYDKASEAWTKFSPKVSELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTP 682

Query: 556  LNNYDAVILLHRENLPYPERLLFPSELNQGKQLVCGKPSKLFHPFVMPGDLKANIEEHRR 377
            L NYDAVILLHR+ LPYP+RLLFPSELNQG  +  G P+K+F PF+ P +LKA+ E  + 
Sbjct: 683  LTNYDAVILLHRDKLPYPQRLLFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKD 742

Query: 376  KLMVDFDPLRCFIKDLERRFPDMLKVWYDSLGGDAIGVTWEKEGLKKRGRD--VVGEGKE 203
            +L+V+FDPLRC+I+DL++ F +   +WYDSLGGDAIGVTW +   KKR RD  VV E KE
Sbjct: 743  RLLVNFDPLRCYIEDLQKEFSNTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEVVAEEKE 802

Query: 202  LLDELKAVGDVGKGFVRSIYSLKVPRL 122
              + LK+ G+ GKG +RSIY LK PRL
Sbjct: 803  PAEVLKSAGETGKGLMRSIYLLKAPRL 829


>ref|XP_002886383.1| hypothetical protein ARALYDRAFT_474974 [Arabidopsis lyrata subsp.
            lyrata] gi|297332224|gb|EFH62642.1| hypothetical protein
            ARALYDRAFT_474974 [Arabidopsis lyrata subsp. lyrata]
          Length = 1049

 Score =  263 bits (671), Expect = 4e-68
 Identities = 127/205 (61%), Positives = 156/205 (76%)
 Frame = -3

Query: 739  SAMFLATSYDKVSESWTKSSPNSLELRRLAAYARSSSNLLTKLIMQDQHDSYGWECIFRT 560
            SAMFLA  YDK SE+WT +SPN LE +RL AYARSS+N+L+KL++Q+ +DS  WEC+FRT
Sbjct: 844  SAMFLAAPYDKASEAWTATSPNLLEQKRLVAYARSSANVLSKLVLQEHNDSVRWECLFRT 903

Query: 559  PLNNYDAVILLHRENLPYPERLLFPSELNQGKQLVCGKPSKLFHPFVMPGDLKANIEEHR 380
            PL+NYDAVILLHR+ LPYP RLLFPSELNQGK +  GK S+LF+PF+ PGDLK + EE +
Sbjct: 904  PLHNYDAVILLHRDKLPYPRRLLFPSELNQGKHVARGKASRLFNPFMPPGDLKRSHEELK 963

Query: 379  RKLMVDFDPLRCFIKDLERRFPDMLKVWYDSLGGDAIGVTWEKEGLKKRGRDVVGEGKEL 200
             KLMVDF+P +C +  L+  F   LK WYD +GGDAIG+TW K   KKR RD   E    
Sbjct: 964  NKLMVDFEPTKCLLSGLQEEF-GTLKPWYDHIGGDAIGLTWNKHNSKKRERDEEEEESNP 1022

Query: 199  LDELKAVGDVGKGFVRSIYSLKVPR 125
            ++ LKAVG++GKG VR IY LK PR
Sbjct: 1023 MEMLKAVGEMGKGLVRDIYLLKPPR 1047


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