BLASTX nr result

ID: Panax21_contig00033097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033097
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU23294.1| unknown [Glycine max]                                  128   9e-45
ref|XP_003556199.1| PREDICTED: uncharacterized protein LOC100797...   126   7e-44
gb|AAL07014.1| unknown protein [Arabidopsis thaliana]                 110   2e-41
ref|XP_002874579.1| hypothetical protein ARALYDRAFT_489815 [Arab...   108   4e-40
ref|NP_192700.2| Mitochondrial transcription termination factor ...   108   4e-40

>gb|ACU23294.1| unknown [Glycine max]
          Length = 216

 Score =  128 bits (321), Expect(2) = 9e-45
 Identities = 62/116 (53%), Positives = 80/116 (68%)
 Frame = -1

Query: 624 HIQPHVGSEVLSHEERNTWVACRQALSPFKFSIEEEDKILGKAFGLVHSPYWGEEREKEV 445
           H    + + + S+E+++ W AC+QALS F FS EE+DKILGKAFGL+HSPYWGEER KEV
Sbjct: 65  HSTAQIENIITSNEDQSMWEACKQALSAFNFSDEEKDKILGKAFGLIHSPYWGEERSKEV 124

Query: 444 PQRDIVNDILNYXXXXXXXXXXXXXXXXKFPEVLGCNLEDELKNNVQVLEKERGDK 277
           P+   VN +L+Y                KFPEVLGCNLE+ELK NV++LE++ G K
Sbjct: 125 PKLKTVNGVLDYLRSLNLSDDDLSILLKKFPEVLGCNLEEELKGNVKILEEQWGIK 180



 Score = 79.0 bits (193), Expect(2) = 9e-45
 Identities = 34/39 (87%), Positives = 35/39 (89%)
 Frame = -2

Query: 284 GIKGKPLRNLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF 168
           GIKG  LR LLLRNPKVLGYNVDCKGDC+AQCTRCW RF
Sbjct: 178 GIKGNFLRKLLLRNPKVLGYNVDCKGDCIAQCTRCWARF 216


>ref|XP_003556199.1| PREDICTED: uncharacterized protein LOC100797265 [Glycine max]
          Length = 235

 Score =  126 bits (316), Expect(2) = 7e-44
 Identities = 60/112 (53%), Positives = 78/112 (69%)
 Frame = -1

Query: 624 HIQPHVGSEVLSHEERNTWVACRQALSPFKFSIEEEDKILGKAFGLVHSPYWGEEREKEV 445
           H    + + + S+E+++ W AC+QALS F FS EE+DKILGKAFGL+HSPYWGEER KEV
Sbjct: 84  HSTAQIENIITSNEDQSMWEACKQALSAFNFSDEEKDKILGKAFGLIHSPYWGEERSKEV 143

Query: 444 PQRDIVNDILNYXXXXXXXXXXXXXXXXKFPEVLGCNLEDELKNNVQVLEKE 289
           P+   VN +L+Y                KFPEVLGCNLE+ELK NV++LE++
Sbjct: 144 PKLKTVNGVLDYLRSLNLSDDDLSILLKKFPEVLGCNLEEELKGNVKILEEQ 195



 Score = 77.8 bits (190), Expect(2) = 7e-44
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = -2

Query: 281 IKGKPLRNLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF 168
           IKG  LR LLLRNPKVLGYNVDCKGDC+AQCTRCW RF
Sbjct: 198 IKGNSLRKLLLRNPKVLGYNVDCKGDCIAQCTRCWARF 235


>gb|AAL07014.1| unknown protein [Arabidopsis thaliana]
          Length = 210

 Score =  110 bits (274), Expect(2) = 2e-41
 Identities = 54/107 (50%), Positives = 71/107 (66%)
 Frame = -1

Query: 591 SHEERNTWVACRQALSPFKFSIEEEDKILGKAFGLVHSPYWGEEREKEVPQRDIVNDILN 412
           S+E+ N W  C++ALS F FS+EE+DKILGKAFG +HSPYW EER KE P+ + +N IL 
Sbjct: 70  SNEDPNIWEECKEALSCFDFSVEEKDKILGKAFGHIHSPYWTEERVKENPKVETLNQILE 129

Query: 411 YXXXXXXXXXXXXXXXXKFPEVLGCNLEDELKNNVQVLEKERGDKRK 271
           +                KFPEVLGC+LE+E+K N+ +LE + G K K
Sbjct: 130 FLRSLGLSDEDLHKVMKKFPEVLGCSLEEEMKPNIGILENQWGIKGK 176



 Score = 85.9 bits (211), Expect(2) = 2e-41
 Identities = 37/39 (94%), Positives = 38/39 (97%)
 Frame = -2

Query: 284 GIKGKPLRNLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF 168
           GIKGK LRNLLLRNPKVLGYNVDCKGDC+AQCTRCWVRF
Sbjct: 172 GIKGKQLRNLLLRNPKVLGYNVDCKGDCVAQCTRCWVRF 210


>ref|XP_002874579.1| hypothetical protein ARALYDRAFT_489815 [Arabidopsis lyrata subsp.
           lyrata] gi|297320416|gb|EFH50838.1| hypothetical protein
           ARALYDRAFT_489815 [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score =  108 bits (269), Expect(2) = 4e-40
 Identities = 52/103 (50%), Positives = 69/103 (66%)
 Frame = -1

Query: 591 SHEERNTWVACRQALSPFKFSIEEEDKILGKAFGLVHSPYWGEEREKEVPQRDIVNDILN 412
           S+E+  TW  C++ALS F FS+EE+DKILGKAFG +HSPYW EER KE P+ + +N IL 
Sbjct: 74  SNEDPKTWEECKEALSCFDFSVEEKDKILGKAFGHIHSPYWTEERVKENPKVETLNQILE 133

Query: 411 YXXXXXXXXXXXXXXXXKFPEVLGCNLEDELKNNVQVLEKERG 283
           +                KFPEVLGC+LE+E+K N+ +LE + G
Sbjct: 134 FLRSLGLSDEDLHKVMKKFPEVLGCSLEEEMKPNIGILENQWG 176



 Score = 83.6 bits (205), Expect(2) = 4e-40
 Identities = 36/39 (92%), Positives = 37/39 (94%)
 Frame = -2

Query: 284 GIKGKPLRNLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF 168
           GI GK LRNLLLRNPKVLGYNVDCKGDC+AQCTRCWVRF
Sbjct: 176 GITGKQLRNLLLRNPKVLGYNVDCKGDCVAQCTRCWVRF 214


>ref|NP_192700.2| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|332657372|gb|AEE82772.1|
           Mitochondrial transcription termination factor family
           protein [Arabidopsis thaliana]
          Length = 212

 Score =  108 bits (269), Expect(2) = 4e-40
 Identities = 52/103 (50%), Positives = 69/103 (66%)
 Frame = -1

Query: 591 SHEERNTWVACRQALSPFKFSIEEEDKILGKAFGLVHSPYWGEEREKEVPQRDIVNDILN 412
           S+E+ N W  C++ALS F FS+EE+DKILGKAFG +HSPYW EER KE P+ + +N IL 
Sbjct: 72  SNEDPNIWEECKEALSCFDFSVEEKDKILGKAFGHIHSPYWTEERVKENPKVETLNQILE 131

Query: 411 YXXXXXXXXXXXXXXXXKFPEVLGCNLEDELKNNVQVLEKERG 283
           +                KFPEVLGC+LE+E+K N+ +LE + G
Sbjct: 132 FLRSLGLSDEDLHKVMKKFPEVLGCSLEEEMKPNIGILENQWG 174



 Score = 83.6 bits (205), Expect(2) = 4e-40
 Identities = 36/39 (92%), Positives = 37/39 (94%)
 Frame = -2

Query: 284 GIKGKPLRNLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF 168
           GI GK LRNLLLRNPKVLGYNVDCKGDC+AQCTRCWVRF
Sbjct: 174 GITGKQLRNLLLRNPKVLGYNVDCKGDCVAQCTRCWVRF 212


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