BLASTX nr result

ID: Panax21_contig00033096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033096
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...    80   5e-16
emb|CBI20118.3| unnamed protein product [Vitis vinifera]               78   8e-16
emb|CBI31012.3| unnamed protein product [Vitis vinifera]               78   4e-15
emb|CAN83337.1| hypothetical protein VITISV_004574 [Vitis vinifera]    80   1e-13
emb|CAN79309.1| hypothetical protein VITISV_020559 [Vitis vinifera]    70   2e-13

>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score = 80.1 bits (196), Expect(2) = 5e-16
 Identities = 35/61 (57%), Positives = 47/61 (77%)
 Frame = +1

Query: 79  KCHFCKKQGHIQKECPKLRE*LEKKGKSSINYVTYESFLIDVPSNTWWLDTGAMVHITNS 258
           KC FCKK+GH++K CP  ++ LEKKGKS I+ V YES ++ V  NTWW+D+G+ +HI NS
Sbjct: 207 KCFFCKKKGHMKKNCPGFQKWLEKKGKS-ISLVCYESNMVSVNINTWWIDSGSTIHIANS 265

Query: 259 L 261
           L
Sbjct: 266 L 266



 Score = 28.9 bits (63), Expect(2) = 5e-16
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +3

Query: 300 ERTIKVGNEESIQVEAVGTLPLVLESGFHL 389
           E++I  GN+    VEA+GT  L L SGF L
Sbjct: 279 EQSILSGNKLGSHVEAIGTCILTLSSGFIL 308


>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
          Length = 1354

 Score = 78.2 bits (191), Expect(2) = 8e-16
 Identities = 32/67 (47%), Positives = 50/67 (74%)
 Frame = +1

Query: 82  CHFCKKQGHIQKECPKLRE*LEKKGKSSINYVTYESFLIDVPSNTWWLDTGAMVHITNSL 261
           C+FC K+GH++K+C K +   EK+G  ++++V YES L +VPSNTWW+D+GA  H+TN +
Sbjct: 619 CYFCGKKGHVKKDCIKRKAWFEKRG-INLSFVCYESNLAEVPSNTWWIDSGATTHVTNLM 677

Query: 262 HEFLSKK 282
             FL+ +
Sbjct: 678 QGFLTTR 684



 Score = 30.0 bits (66), Expect(2) = 8e-16
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +3

Query: 291 KKGERTIKVGNEESIQVEAVGTLPLVLESGFHL 389
           K+ E+ + +GN   ++V AVGT  L+LE+G  +
Sbjct: 687 KESEKFLYMGNRLKVEVVAVGTYRLLLETGHRM 719


>emb|CBI31012.3| unnamed protein product [Vitis vinifera]
          Length = 468

 Score = 77.8 bits (190), Expect(2) = 4e-15
 Identities = 31/61 (50%), Positives = 49/61 (80%)
 Frame = +1

Query: 79  KCHFCKKQGHIQKECPKLRE*LEKKGKSSINYVTYESFLIDVPSNTWWLDTGAMVHITNS 258
           KC FCKK+GH++K+C K +  LEKKG  + +++ YES +++V +NTWW+D+G+ +HI+NS
Sbjct: 282 KCFFCKKKGHVKKKCLKFQNWLEKKGNPT-SFICYESNMVNVNTNTWWIDSGSTIHISNS 340

Query: 259 L 261
           L
Sbjct: 341 L 341



 Score = 28.1 bits (61), Expect(2) = 4e-15
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 300 ERTIKVGNEESIQVEAVGTLPLVLESGFHL 389
           E+ I  GN+    VEA+GT  L L SGF L
Sbjct: 354 EQFILSGNKMGSHVEAIGTCYLTLNSGFVL 383


>emb|CAN83337.1| hypothetical protein VITISV_004574 [Vitis vinifera]
          Length = 1060

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 9/105 (8%)
 Frame = +1

Query: 1   FKNKDKPISTKTNKANYSGNNSETCP---KCHFCKKQGHIQKECPKLRE*LEKKGKSSIN 171
           FK K+   +  T+ A+ S N +++     KC+FC K GH Q  C K +  LEKK K  I 
Sbjct: 174 FKRKENS-NQGTSNASASSNAAKSEKFKGKCNFCHKIGHKQANCFKFKNWLEKKKKCEIV 232

Query: 172 YVTY------ESFLIDVPSNTWWLDTGAMVHITNSLHEFLSKKTL 288
            V Y      E+ ++DV +N+WWLDT A++H+TNSLHE  +K++L
Sbjct: 233 VVVYLNANMIETNIVDVHANSWWLDTSAIIHVTNSLHEMTNKRSL 277


>emb|CAN79309.1| hypothetical protein VITISV_020559 [Vitis vinifera]
          Length = 1851

 Score = 69.7 bits (169), Expect(2) = 2e-13
 Identities = 30/61 (49%), Positives = 46/61 (75%)
 Frame = +1

Query: 79  KCHFCKKQGHIQKECPKLRE*LEKKGKSSINYVTYESFLIDVPSNTWWLDTGAMVHITNS 258
           KC F KK+GH++K C K ++ LEKKGK  I++  YES ++DV  NTWW+ +G+ +H++N+
Sbjct: 236 KCFFYKKKGHMKKGCTKFQKWLEKKGKP-ISFFCYESNMVDVIYNTWWIYSGSTIHVSNT 294

Query: 259 L 261
           L
Sbjct: 295 L 295



 Score = 30.4 bits (67), Expect(2) = 2e-13
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = +3

Query: 300 ERTIKVGNEESIQVEAVGTLPLVLESGFHL 389
           E+ I  GN+    VEAVGT  LVL SGF L
Sbjct: 308 EQCIYSGNKMRSHVEAVGTCNLVLSSGFIL 337


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