BLASTX nr result

ID: Panax21_contig00033088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033088
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278432.2| PREDICTED: uncharacterized protein LOC100247...    59   4e-07
emb|CBI26249.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_002311624.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_002278432.2| PREDICTED: uncharacterized protein LOC100247619 [Vitis vinifera]
          Length = 1547

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 43/145 (29%), Positives = 70/145 (48%)
 Frame = -1

Query: 517  PVLDEKSELNSSPEHDLHMSDDTGLYSLNENNNKASATSSALQAPVIPSNENSPVVPSND 338
            P L+ KS+++SS  HDL + + +     N+ N+   A+ S    P +P    S +  ++D
Sbjct: 998  PDLENKSDIDSSNGHDLSIHNHSISQHSNDRNDNVCASDSISLTPAVPLTNPSIMSGASD 1057

Query: 337  IAVIXXXXXXXSEPKQEPTNDETLVINSKSVNKIAESSVNLKSVCPSDTSPDILEAENSV 158
                        EP+ + + +ET   NS+S +K+ E++   K   PS  S ++LE E  V
Sbjct: 1058 AL---------HEPEIQGSGEETRCSNSESGDKLNEAT-EAKCPSPSYASCNVLEIEKHV 1107

Query: 157  LGSPVKDHTRSSSDDVKDDALKENV 83
              SP +    S S+D   DA   NV
Sbjct: 1108 FDSPGEGDMHSPSEDKVGDARDPNV 1132


>emb|CBI26249.3| unnamed protein product [Vitis vinifera]
          Length = 1264

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 43/145 (29%), Positives = 70/145 (48%)
 Frame = -1

Query: 517  PVLDEKSELNSSPEHDLHMSDDTGLYSLNENNNKASATSSALQAPVIPSNENSPVVPSND 338
            P L+ KS+++SS  HDL + + +     N+ N+   A+ S    P +P    S +  ++D
Sbjct: 830  PDLENKSDIDSSNGHDLSIHNHSISQHSNDRNDNVCASDSISLTPAVPLTNPSIMSGASD 889

Query: 337  IAVIXXXXXXXSEPKQEPTNDETLVINSKSVNKIAESSVNLKSVCPSDTSPDILEAENSV 158
                        EP+ + + +ET   NS+S +K+ E++   K   PS  S ++LE E  V
Sbjct: 890  AL---------HEPEIQGSGEETRCSNSESGDKLNEAT-EAKCPSPSYASCNVLEIEKHV 939

Query: 157  LGSPVKDHTRSSSDDVKDDALKENV 83
              SP +    S S+D   DA   NV
Sbjct: 940  FDSPGEGDMHSPSEDKVGDARDPNV 964


>ref|XP_002311624.1| predicted protein [Populus trichocarpa] gi|222851444|gb|EEE88991.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 42/122 (34%), Positives = 62/122 (50%)
 Frame = -1

Query: 502 KSELNSSPEHDLHMSDDTGLYSLNENNNKASATSSALQAPVIPSNENSPVVPSNDIAVIX 323
           KS+ +S   HD H  D++GL      N  ASA+S + Q   + SN  S +  S D++   
Sbjct: 16  KSDADSPAGHDAHDCDNSGLECSIGKNEVASASSDS-QCADVSSNNVSTMNSSLDVS--- 71

Query: 322 XXXXXXSEPKQEPTNDETLVINSKSVNKIAESSVNLKSVCPSDTSPDILEAENSVLGSPV 143
                       P  +ET+  NSKS +K+ +S+V+ KS C S T+ D+ E   S   SPV
Sbjct: 72  -----HGLQSAVPLKEETIQTNSKSEDKLVQSAVDKKSECVSYTTHDVREMVKSKSDSPV 126

Query: 142 KD 137
           +D
Sbjct: 127 ED 128


Top