BLASTX nr result

ID: Panax21_contig00033083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033083
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis...    74   1e-11
emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]    74   1e-11
ref|XP_003609980.1| Polygalacturonase-like protein [Medicago tru...    69   5e-10
ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like i...    67   2e-09
ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like i...    67   2e-09

>ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
           gi|297738532|emb|CBI27777.3| unnamed protein product
           [Vitis vinifera]
          Length = 493

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = -2

Query: 230 NHHRDLDYKRSVPSFLSSRHTL-SLVWTACFFLIFIWQRNAVDRLFEFRRRALQSTPIPM 54
           NHHR  D KR +P+FLSS  TL +++W A F  +F+WQRN V+ L  FRR    + P+P 
Sbjct: 13  NHHRP-DLKRWIPAFLSSHRTLFTILWIAAFASVFVWQRNIVEGLLTFRR--APARPLPR 69

Query: 53  LRSLVLDLRDFGAVGD 6
           LR  V +L DFG VGD
Sbjct: 70  LRPAVYNLTDFGGVGD 85


>emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
          Length = 509

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = -2

Query: 230 NHHRDLDYKRSVPSFLSSRHTL-SLVWTACFFLIFIWQRNAVDRLFEFRRRALQSTPIPM 54
           NHHR  D KR +P+FLSS  TL +++W A F  +F+WQRN V+ L  FRR    + P+P 
Sbjct: 13  NHHRP-DLKRWIPAFLSSHRTLFTILWIAAFASVFVWQRNIVEGLLTFRR--APARPLPR 69

Query: 53  LRSLVLDLRDFGAVGD 6
           LR  V +L DFG VGD
Sbjct: 70  LRPAVYNLTDFGGVGD 85


>ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
           gi|355511035|gb|AES92177.1| Polygalacturonase-like
           protein [Medicago truncatula]
          Length = 563

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
 Frame = -2

Query: 227 HHRDLDYKRSVPSFLSSRHTLSLV-WTACFFLIFIWQRNAVDRLFEFRRRALQSTPIPML 51
           HH+ LD+KR VP+F++S  TL +V W A F  +FIWQRN V   F    R +   PIP +
Sbjct: 11  HHQRLDFKRCVPAFITSHKTLFMVLWIAAFLSVFIWQRNMVVGGFMVFGR-VPVRPIPNM 69

Query: 50  RSLVLDLRDFGAVGD 6
           R +V +L DFG VGD
Sbjct: 70  RPVVFNLTDFGGVGD 84


>ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
          Length = 491

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = -2

Query: 227 HHRDLDYKRSVPSFLSSRHTL-SLVWTACFFLIFIWQRNAVDRLFEFRRRALQSTPIPML 51
           HH+ LD +R VP+F +S  TL +L+W A F  +F+WQRN V     +    +   P+PML
Sbjct: 12  HHQRLDLRRWVPAFFTSHKTLLTLLWIAAFASVFLWQRNIVGGFLVY--GGIPGRPMPML 69

Query: 50  RSLVLDLRDFGAVGD 6
           R +  +L DFG VGD
Sbjct: 70  RPMAFNLTDFGGVGD 84


>ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
          Length = 492

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = -2

Query: 227 HHRDLDYKRSVPSFLSSRHTL-SLVWTACFFLIFIWQRNAVDRLFEFRRRALQSTPIPML 51
           HH+ LD +R VP+F +S  TL +L+W A F  +F+WQRN V     +    +   P+PML
Sbjct: 12  HHQRLDLRRWVPAFFTSHKTLLTLLWIAAFASVFLWQRNIVGGFLVY--GGIPGRPMPML 69

Query: 50  RSLVLDLRDFGAVGD 6
           R +  +L DFG VGD
Sbjct: 70  RPMAFNLTDFGGVGD 84


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