BLASTX nr result

ID: Panax21_contig00033061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033061
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625697.1| RING finger and WD repeat domain-containing ...   156   1e-36
emb|CBI30150.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...   148   5e-34
ref|XP_003520658.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...   146   2e-33
ref|XP_004143360.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...   144   7e-33

>ref|XP_003625697.1| RING finger and WD repeat domain-containing protein [Medicago
           truncatula] gi|355500712|gb|AES81915.1| RING finger and
           WD repeat domain-containing protein [Medicago
           truncatula]
          Length = 596

 Score =  156 bits (395), Expect = 1e-36
 Identities = 62/96 (64%), Positives = 82/96 (85%)
 Frame = +1

Query: 181 NGSQIDGLICPICLEAWTNDGDHQVCCLPCGHIYGLSCIKRWLKQHRSTGKCPQCNRKCM 360
           N + IDGLICPIC++AWTN+GDH +CCLPCGHIYG+SC+++WL+Q +++GKCPQCNR+C 
Sbjct: 121 NRTDIDGLICPICMDAWTNEGDHHICCLPCGHIYGMSCVRKWLQQKKNSGKCPQCNRRCS 180

Query: 361 SKEVRVLYASRIVVADEESQKKVQYLEAKCDALEEE 468
            K+VR LYASR+V  DEESQK ++ LE KC +LE +
Sbjct: 181 MKDVRKLYASRVVTVDEESQKMIRSLENKCASLESK 216


>emb|CBI30150.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  148 bits (373), Expect = 5e-34
 Identities = 63/94 (67%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
 Frame = +1

Query: 190 QIDGLICPICLEAWTNDGDHQVCCLPCGHIYGLSCIKRWLKQ-HRSTGKCPQCNRKCMSK 366
           QIDGL CPIC+EAWT+ G+HQVCCLPCGHIYG+SCIK+W +Q  RS+GKCPQC RKC  +
Sbjct: 103 QIDGLCCPICMEAWTSGGEHQVCCLPCGHIYGISCIKKWFQQCGRSSGKCPQCKRKCTLR 162

Query: 367 EVRVLYASRIVVADEESQKKVQYLEAKCDALEEE 468
            VR LYASR+V  DE+ +KK++ LEAKC +LE++
Sbjct: 163 NVRTLYASRVVAVDEDLRKKIRSLEAKCASLEKK 196


>ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Vitis vinifera]
          Length = 567

 Score =  148 bits (373), Expect = 5e-34
 Identities = 63/94 (67%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
 Frame = +1

Query: 190 QIDGLICPICLEAWTNDGDHQVCCLPCGHIYGLSCIKRWLKQ-HRSTGKCPQCNRKCMSK 366
           QIDGL CPIC+EAWT+ G+HQVCCLPCGHIYG+SCIK+W +Q  RS+GKCPQC RKC  +
Sbjct: 103 QIDGLCCPICMEAWTSGGEHQVCCLPCGHIYGISCIKKWFQQCGRSSGKCPQCKRKCTLR 162

Query: 367 EVRVLYASRIVVADEESQKKVQYLEAKCDALEEE 468
            VR LYASR+V  DE+ +KK++ LEAKC +LE++
Sbjct: 163 NVRTLYASRVVAVDEDLRKKIRSLEAKCASLEKK 196


>ref|XP_003520658.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Glycine max]
          Length = 631

 Score =  146 bits (368), Expect = 2e-33
 Identities = 57/92 (61%), Positives = 78/92 (84%)
 Frame = +1

Query: 193 IDGLICPICLEAWTNDGDHQVCCLPCGHIYGLSCIKRWLKQHRSTGKCPQCNRKCMSKEV 372
           +DGL+CPIC++AWTN+G+H +CCLPCGHIYG+SCIK+WL+  R++ KCPQC  KC  K+V
Sbjct: 121 VDGLLCPICMDAWTNNGEHHICCLPCGHIYGMSCIKKWLQHRRNSNKCPQCKVKCSLKDV 180

Query: 373 RVLYASRIVVADEESQKKVQYLEAKCDALEEE 468
           R LYAS++V  +EE+QK+++ LEAKC ALE +
Sbjct: 181 RKLYASQVVAVEEENQKRIRSLEAKCAALESK 212


>ref|XP_004143360.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Cucumis sativus]
           gi|449482586|ref|XP_004156335.1| PREDICTED: E3
           ubiquitin-protein ligase RFWD3-like [Cucumis sativus]
          Length = 617

 Score =  144 bits (363), Expect = 7e-33
 Identities = 58/96 (60%), Positives = 79/96 (82%)
 Frame = +1

Query: 181 NGSQIDGLICPICLEAWTNDGDHQVCCLPCGHIYGLSCIKRWLKQHRSTGKCPQCNRKCM 360
           N S+ D +IC IC++AWTN G+H +CCLPCGH+YG+SCI RWL+Q ++ GKCPQCNRKC 
Sbjct: 103 NRSENDDMICSICMDAWTNYGEHHICCLPCGHLYGMSCINRWLQQRKNAGKCPQCNRKCS 162

Query: 361 SKEVRVLYASRIVVADEESQKKVQYLEAKCDALEEE 468
           +K+VR ++A RIV AD ESQK+++ LEA C +LE++
Sbjct: 163 TKDVRKIFAPRIVAADGESQKRIKSLEATCASLEKK 198


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