BLASTX nr result

ID: Panax21_contig00033044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033044
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like...   161   7e-38
emb|CBI39502.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002872261.1| predicted protein [Arabidopsis lyrata subsp....    85   6e-15
ref|XP_003568921.1| PREDICTED: ATP-dependent DNA helicase Q-like...    85   8e-15

>ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Vitis
           vinifera]
          Length = 893

 Score =  161 bits (407), Expect = 7e-38
 Identities = 92/180 (51%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
 Frame = -3

Query: 539 SVASDQVIAELIGLGFEFPQITEAIEAVGPSLDAAIEFILDDSRRNVRGASSSSNCLANS 360
           +V SDQVIAELI +GFEF  +TEAIE VGPSLD AIEFIL+   R+ RGASS+S C  ++
Sbjct: 5   NVHSDQVIAELIEMGFEFSAVTEAIEVVGPSLDDAIEFILNGPHRSSRGASSNSKCPTST 64

Query: 359 TRALGKRAVSSSNPFGRMRQSRLVEHLQSAGGPKRSKPTPESDALVS-GSEFLARHVERP 183
            +AL K A+ SS+   +MRQS + EHLQ  G  KR +     +A+   GSE L  H+E  
Sbjct: 65  GKALDKTALISSHSLDQMRQSSITEHLQPVGRSKRIRTNSVYNAVSPYGSEMLPGHLEEQ 124

Query: 182 NDSSSLVDSNPKSTTAMCTIGSYCKQDEDIGPDWEQRVRTLLHKHFGYSSLKRFQKEALT 3
             S S    N K+ + +  +   C+Q+ +IG DW QRV +LLHKHFG  SLK FQKEAL+
Sbjct: 125 VLSFSGEGCNLKAASELSALPVCCQQELEIGKDWVQRVNSLLHKHFGILSLKSFQKEALS 184


>emb|CBI39502.3| unnamed protein product [Vitis vinifera]
          Length = 1537

 Score =  145 bits (366), Expect = 4e-33
 Identities = 88/180 (48%), Positives = 110/180 (61%), Gaps = 1/180 (0%)
 Frame = -3

Query: 539 SVASDQVIAELIGLGFEFPQITEAIEAVGPSLDAAIEFILDDSRRNVRGASSSSNCLANS 360
           +V SDQVIAELI +GFEF  +TEAIE VGPSLD AIEFIL+   R+ RGASS+S C  ++
Sbjct: 5   NVHSDQVIAELIEMGFEFSAVTEAIEVVGPSLDDAIEFILNGPHRSSRGASSNSKCPTST 64

Query: 359 TRALGKRAVSSSNPFGRMRQSRLVEHLQSAGGPKRSKPTPESDALVS-GSEFLARHVERP 183
            +AL K A+ SS+   +MRQS + EHLQ  G  KR +     +A+   GSE L       
Sbjct: 65  GKALDKTALISSHSLDQMRQSSITEHLQPVGRSKRIRTNSVYNAVSPYGSEMLPE----- 119

Query: 182 NDSSSLVDSNPKSTTAMCTIGSYCKQDEDIGPDWEQRVRTLLHKHFGYSSLKRFQKEALT 3
                       S   +C     C+Q+ +IG DW QRV +LLHKHFG  SLK FQKEAL+
Sbjct: 120 -----------LSALPVC-----CQQELEIGKDWVQRVNSLLHKHFGILSLKSFQKEALS 163


>ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|222871667|gb|EEF08798.1|
           predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  116 bits (291), Expect = 2e-24
 Identities = 76/183 (41%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
 Frame = -3

Query: 539 SVASDQVIAELIGLGFEFPQITEAIEAVGPSLDAAIEFILD-DSRRNVRGA---SSSSNC 372
           SVA D  + +LI +GFE     +A++ VGPSLD A++++L+  S RN  G+   +SSS C
Sbjct: 4   SVACDGTVEKLIEMGFESCAAEQAVKEVGPSLDKAVDYLLNGSSSRNCEGSGAMTSSSEC 63

Query: 371 LANSTRALGKRAVSSSNPFGRMRQSRLVEHLQSAGGPKRSKPTPE-SDALVSGSEFLARH 195
             +S    GKR +S S   GR RQS ++EH +     KR   + + SD LVSGS+ L   
Sbjct: 64  FTSSKS--GKRMLSGSAYSGRKRQSSILEHFRLPRSVKRGMLSSDVSDVLVSGSKVLPLS 121

Query: 194 VERPNDSSSLVDSNPKSTTAMCTIGSYCKQDEDIGPDWEQRVRTLLHKHFGYSSLKRFQK 15
           V    +S   VD   K   A+  +  +CK++   G DWE+R   +L + FGYSSLK FQK
Sbjct: 122 VNGCEESCVSVDCG-KVENAVDGLPVWCKEEVGFGLDWEERANRVLRERFGYSSLKGFQK 180

Query: 14  EAL 6
           EAL
Sbjct: 181 EAL 183


>ref|XP_002872261.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318098|gb|EFH48520.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 855

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 8/186 (4%)
 Frame = -3

Query: 536 VASDQVIAELIGLGFEFPQITEAIEAVG-PSLDAAIEFILDDSRRNVRGASSSSNCLANS 360
           ++SD V+ +L+ +GFE     +A++AVG  S D A+E+IL    R    A +SS C   S
Sbjct: 3   LSSDHVVMKLVEMGFEKLDALDAVKAVGGKSCDDAVEYILKGHDRTGGSAPASSLCSIGS 62

Query: 359 TRALGKRAVSSSNPFGRMRQSRLVEHLQSAGGPKRSKPTPESDALVSGSEFLARHVERPN 180
            + LGKRA+ SS   G  RQS L++H +S    K+            G+ F    V    
Sbjct: 63  NKILGKRAMPSSFSSGSKRQSSLLDHFRSVDQNKK-----------KGNTFGIAEVNSQL 111

Query: 179 DSSSLVDSNPKSTTAMCTIGSYCKQDEDI-------GPDWEQRVRTLLHKHFGYSSLKRF 21
           ++ S        + A   + S C  + ++          WE RV ++L   FG SSL+ F
Sbjct: 112 ETVSDTSKEQIKSLAPVFLESSCFPETELSNGCSEASSTWETRVNSILQNRFGISSLRSF 171

Query: 20  QKEALT 3
           Q+EAL+
Sbjct: 172 QREALS 177


>ref|XP_003568921.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Brachypodium
           distachyon]
          Length = 865

 Score = 84.7 bits (208), Expect = 8e-15
 Identities = 63/186 (33%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
 Frame = -3

Query: 536 VASDQVIAELIGLGFEFPQITEAIEAVGPSLDAAIEFILDDSRRNVRGASS----SSNCL 369
           V++D VIAEL+ +GF+F +I+EAI  VGP+    +EF+L+ S    R  S       +  
Sbjct: 10  VSADHVIAELLEMGFDFDKISEAIGVVGPNRADVVEFVLNGSGSGQRKPSQEFGRDLSVP 69

Query: 368 ANSTRALGKRAVSSSNPFGRMRQSRLVEHLQSAGGPKRSKPTPESDALVSGSEFLARHVE 189
           +NS      R    +NP GR +QS + +H+ S    KR                 +R  E
Sbjct: 70  SNSGSRASDRRTRLANPRGRFKQSSITDHVSSTTCSKRE----------------SRGEE 113

Query: 188 RPNDSSSLVDS-NPKSTTAMCTIGSYCKQ----DEDIGPDWEQRVRTLLHKHFGYSSLKR 24
                S LVDS +P  T A+C+      Q    +   G D   ++  +L KHFG+ S+K 
Sbjct: 114 ASTSYSCLVDSVDPGLTAAICSKSKPESQPLLENPRGGFDRSNKISAVLRKHFGFLSVKG 173

Query: 23  FQKEAL 6
           FQKEAL
Sbjct: 174 FQKEAL 179


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