BLASTX nr result

ID: Panax21_contig00033035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033035
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32161.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002512188.1| molybdopterin cofactor synthesis protein A, ...    94   9e-18
ref|XP_003546857.1| PREDICTED: molybdopterin biosynthesis protei...    89   3e-16
ref|XP_003531456.1| PREDICTED: molybdopterin biosynthesis protei...    88   8e-16
ref|XP_004158212.1| PREDICTED: molybdopterin biosynthesis protei...    87   2e-15

>emb|CBI32161.3| unnamed protein product [Vitis vinifera]
          Length = 468

 Score =  105 bits (261), Expect = 5e-21
 Identities = 59/125 (47%), Positives = 77/125 (61%), Gaps = 25/125 (20%)
 Frame = +2

Query: 83  SMLRNSSRALGWQLGFRR--FDSVKFKYKSYFHSVDHYDEGLISNHVDGSMSKMYATSCE 256
           +M R +S+  GW+LG ++  F SV  + +SYF       +GL S+ +DG+MS+ YATSCE
Sbjct: 46  TMRRYASKTSGWRLGLKKLNFFSVNCESESYFCQGSGNCQGLTSSFIDGTMSQAYATSCE 105

Query: 257 KFSE----------------------DAP-KFNPVSDMLIDSFGRLHTYLRISLTERCNL 367
           + S+                      +AP + NPVSDML+DSFGR HTYLRISLTERCNL
Sbjct: 106 RLSKSLIKDNPTSDKLSYATSCAQLSEAPARDNPVSDMLVDSFGRRHTYLRISLTERCNL 165

Query: 368 RCQYC 382
           RC YC
Sbjct: 166 RCMYC 170


>ref|XP_002512188.1| molybdopterin cofactor synthesis protein A, putative [Ricinus
           communis] gi|223548732|gb|EEF50222.1| molybdopterin
           cofactor synthesis protein A, putative [Ricinus
           communis]
          Length = 390

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 53/102 (51%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
 Frame = +2

Query: 86  MLRNSSRALGWQLGFRRF--DSVKFKYKSYFHSVDHYDEGLISNHVDGSMSKMYATSCEK 259
           M R  S+   W LGFR      V+ + +  F  +            DG + K YATSC K
Sbjct: 1   MKRCLSKIANWHLGFRNSACSLVECEPRCNFQGLSR----------DGFVLKAYATSCAK 50

Query: 260 F-SEDAPKFNPVSDMLIDSFGRLHTYLRISLTERCNLRCQYC 382
             SED+P  N +SDMLIDSFGR+HTYLRISLTERCNLRCQYC
Sbjct: 51  LPSEDSPNTNSISDMLIDSFGRMHTYLRISLTERCNLRCQYC 92


>ref|XP_003546857.1| PREDICTED: molybdopterin biosynthesis protein CNX2-like [Glycine
           max]
          Length = 399

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/46 (86%), Positives = 41/46 (89%)
 Frame = +2

Query: 245 TSCEKFSEDAPKFNPVSDMLIDSFGRLHTYLRISLTERCNLRCQYC 382
           TSC   SED PK NPVSDML+DSFGRLHTYLRISLTERCNLRCQYC
Sbjct: 56  TSCASLSEDQPKDNPVSDMLVDSFGRLHTYLRISLTERCNLRCQYC 101


>ref|XP_003531456.1| PREDICTED: molybdopterin biosynthesis protein CNX2-like [Glycine
           max]
          Length = 400

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/102 (48%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
 Frame = +2

Query: 86  MLRNSSRALGWQLGFRRFDSVKFKYK--SYFHSVDHYDEGLISNHVDGSMSKMYAT-SCE 256
           M R  S+ + + +GF   +S     +  SY  +     +   S ++    ++ +AT SC 
Sbjct: 1   MRRYLSKFIHYPIGFNPSNSFPLNCEMGSYCAARSTNRQASFSGNMHEYATRAFATTSCA 60

Query: 257 KFSEDAPKFNPVSDMLIDSFGRLHTYLRISLTERCNLRCQYC 382
             SED PK N VSDML+DSFGRLHTYLRISLTERCNLRCQYC
Sbjct: 61  SLSEDQPKDNSVSDMLVDSFGRLHTYLRISLTERCNLRCQYC 102


>ref|XP_004158212.1| PREDICTED: molybdopterin biosynthesis protein CNX2-like [Cucumis
           sativus]
          Length = 403

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
 Frame = +2

Query: 77  AVSMLRNSSRALGWQLGFRRFDSVKFKYKSYFHSVDHYDEGL--ISNHVDGSMSKMYATS 250
           A +M RN+     W +   + + +    ++  +S+     GL    N ++ S  + YATS
Sbjct: 4   ATNMRRNACVVTNWLVASGKLNFLSVGSENPSYSIIRKMNGLRIFGNQLEAS--RTYATS 61

Query: 251 CEKFSEDAPKFNPVSDMLIDSFGRLHTYLRISLTERCNLRCQYC 382
           C K S++  K N  S+ML+DSFGR+HTYLRISLTERCNLRCQYC
Sbjct: 62  CAKLSDEIQKENSDSNMLVDSFGRMHTYLRISLTERCNLRCQYC 105


Top