BLASTX nr result
ID: Panax21_contig00033027
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00033027 (477 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI38027.3| unnamed protein product [Vitis vinifera] 154 7e-36 ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257... 154 7e-36 ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|2... 141 6e-32 ref|NP_565513.1| RNA recognition motif-containing protein [Arabi... 127 1e-27 ref|XP_003590983.1| Eukaryotic translation initiation factor 3 s... 125 4e-27 >emb|CBI38027.3| unnamed protein product [Vitis vinifera] Length = 918 Score = 154 bits (389), Expect = 7e-36 Identities = 82/141 (58%), Positives = 93/141 (65%), Gaps = 1/141 (0%) Frame = -3 Query: 475 IPQNFETGQSKGFAFVKYTCKQDAENAIKKFNGNSFGKRPIAVDWAVPKKIYATGAQPAT 296 IPQN ETG S+GFAFVK+T KQDAENAI+KFNG GKRPIAVDWAVPKKIY TGA P Sbjct: 294 IPQNSETGLSRGFAFVKFTSKQDAENAIQKFNGEKIGKRPIAVDWAVPKKIYITGANPVV 353 Query: 295 ASEDGQ-NGSXXXXXXXXXXXXXXXXXXXXXITEPNRADVVPDNSYSTEIEGIPTEVDFE 119 ASEDGQ NG + P PD+S +TE E +PTE DF Sbjct: 354 ASEDGQLNGRDGEGDTDSDDLEDDTTDIDNKVPHPQGVGSAPDDSNTTEKEVMPTEFDFN 413 Query: 118 EEADVARKVLNNLISLTSKGT 56 EEAD+ARKVL NLI+ ++KGT Sbjct: 414 EEADIARKVLKNLITSSAKGT 434 >ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera] Length = 972 Score = 154 bits (389), Expect = 7e-36 Identities = 82/141 (58%), Positives = 93/141 (65%), Gaps = 1/141 (0%) Frame = -3 Query: 475 IPQNFETGQSKGFAFVKYTCKQDAENAIKKFNGNSFGKRPIAVDWAVPKKIYATGAQPAT 296 IPQN ETG S+GFAFVK+T KQDAENAI+KFNG GKRPIAVDWAVPKKIY TGA P Sbjct: 313 IPQNSETGLSRGFAFVKFTSKQDAENAIQKFNGEKIGKRPIAVDWAVPKKIYITGANPVV 372 Query: 295 ASEDGQ-NGSXXXXXXXXXXXXXXXXXXXXXITEPNRADVVPDNSYSTEIEGIPTEVDFE 119 ASEDGQ NG + P PD+S +TE E +PTE DF Sbjct: 373 ASEDGQLNGRDGEGDTDSDDLEDDTTDIDNKVPHPQGVGSAPDDSNTTEKEVMPTEFDFN 432 Query: 118 EEADVARKVLNNLISLTSKGT 56 EEAD+ARKVL NLI+ ++KGT Sbjct: 433 EEADIARKVLKNLITSSAKGT 453 >ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|222850181|gb|EEE87728.1| predicted protein [Populus trichocarpa] Length = 974 Score = 141 bits (355), Expect = 6e-32 Identities = 82/157 (52%), Positives = 97/157 (61%), Gaps = 8/157 (5%) Frame = -3 Query: 475 IPQNFETGQSKGFAFVKYTCKQDAENAIKKFNGNSFGKRPIAVDWAVPKKIYATGAQPAT 296 +P N ETG SKGFAFVK+TCKQDAENAI+KFNG FGKRPIAVDWAVPKKIY++GA + Sbjct: 311 VPHNSETGLSKGFAFVKFTCKQDAENAIQKFNGQKFGKRPIAVDWAVPKKIYSSGANVSA 370 Query: 295 ASEDG------QNGSXXXXXXXXXXXXXXXXXXXXXITEPNRADVV--PDNSYSTEIEGI 140 ASEDG QN + + VV PD+ S E E + Sbjct: 371 ASEDGNASAGHQNEKDSSCEDSDYDDEDDNDTDVIGKKQQHDGVVVTSPDSDLS-EKEDM 429 Query: 139 PTEVDFEEEADVARKVLNNLISLTSKGTPISPEDKST 29 PTEVDFE+EAD+ARKVL NLI+ +S P E+ T Sbjct: 430 PTEVDFEQEADIARKVLRNLIASSSDVLPKGIEELET 466 >ref|NP_565513.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gi|4567275|gb|AAD23688.1| expressed protein [Arabidopsis thaliana] gi|16604631|gb|AAL24108.1| unknown protein [Arabidopsis thaliana] gi|27754736|gb|AAO22811.1| unknown protein [Arabidopsis thaliana] gi|330252084|gb|AEC07178.1| RNA recognition motif-containing protein [Arabidopsis thaliana] Length = 1003 Score = 127 bits (318), Expect = 1e-27 Identities = 76/161 (47%), Positives = 96/161 (59%), Gaps = 6/161 (3%) Frame = -3 Query: 475 IPQNFETGQSKGFAFVKYTCKQDAENAIKKFNGNSFGKRPIAVDWAVPKKIYATGAQPAT 296 IP+NFETG KGFAFVK+TCK+DA NAIKKFNG+ FGKRPIAVDWAVPK IY A T Sbjct: 362 IPKNFETGLPKGFAFVKFTCKKDAANAIKKFNGHMFGKRPIAVDWAVPKNIYNGAADATT 421 Query: 295 ASEDG-QNGSXXXXXXXXXXXXXXXXXXXXXITEPNRADVVPDNSYS-TEIEG----IPT 134 AS DG + GS + D D S TE + + T Sbjct: 422 ASADGDKEGSDGDSENSSVDLEEVDEAVESHPPPGDDTDDDEDGSNKLTESDALDKDVGT 481 Query: 133 EVDFEEEADVARKVLNNLISLTSKGTPISPEDKSTAAKSEK 11 +++FE+EADVARKVL NL++ +SKG+ +PE ++ + K Sbjct: 482 DMNFEDEADVARKVLKNLLA-SSKGSTATPEGETEESDKSK 521 >ref|XP_003590983.1| Eukaryotic translation initiation factor 3 subunit G [Medicago truncatula] gi|355480031|gb|AES61234.1| Eukaryotic translation initiation factor 3 subunit G [Medicago truncatula] Length = 962 Score = 125 bits (314), Expect = 4e-27 Identities = 68/155 (43%), Positives = 95/155 (61%), Gaps = 1/155 (0%) Frame = -3 Query: 475 IPQNFETGQSKGFAFVKYTCKQDAENAIKKFNGNSFGKRPIAVDWAVPKKIYATGAQPAT 296 IPQ +TG SKGFAFVK+TCKQDAENAI+K NG+ FG R IAVDWAVPKKI+++ A Sbjct: 313 IPQKSDTGLSKGFAFVKFTCKQDAENAIRKLNGSKFGSRLIAVDWAVPKKIFSSDTNDAP 372 Query: 295 ASEDGQNGSXXXXXXXXXXXXXXXXXXXXXITEPNRADVVPDNSYSTEI-EGIPTEVDFE 119 ASE+GQ ++D D+ + + E +P+E DF+ Sbjct: 373 ASEEGQQ--------KVTDEDGSTTTEDDLENTDKKSDQGDDSDIDSVVEEDVPSEDDFD 424 Query: 118 EEADVARKVLNNLISLTSKGTPISPEDKSTAAKSE 14 +EAD+ARKVLNNLI+ ++K ++ + S+ K++ Sbjct: 425 KEADIARKVLNNLITSSAKDESVNNDSVSSEEKNK 459