BLASTX nr result

ID: Panax21_contig00033025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033025
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281448.2| PREDICTED: psbP domain-containing protein 1,...   344   3e-92
ref|XP_002319475.1| predicted protein [Populus trichocarpa] gi|1...   342   1e-91
ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloropl...   338   2e-90
emb|CBI39622.3| unnamed protein product [Vitis vinifera]              332   8e-89
ref|XP_002330072.1| predicted protein [Populus trichocarpa] gi|2...   332   8e-89

>ref|XP_002281448.2| PREDICTED: psbP domain-containing protein 1, chloroplastic [Vitis
            vinifera]
          Length = 282

 Score =  344 bits (882), Expect = 3e-92
 Identities = 179/265 (67%), Positives = 204/265 (76%)
 Frame = -2

Query: 1026 SLSSATQPAVSWRREKLFSWPELTTPIYRRASVACSSSSTPNSSELQTTKAFAVPRRKAM 847
            S SS+TQPA S R    F +P+   P    A+   S+SS   S +LQTTK FAV RR AM
Sbjct: 20   SSSSSTQPAGSTRPTMSFHYPDFPAPF---ATTNYSASSRAISCQLQTTKGFAVLRRDAM 76

Query: 846  TLLLSGYIFSQADSHNTAFALQSVGLREYIDSFDGYSFKYPQNWIQVRGANADIFFRDPF 667
             L+ S YIFS+   H+ A A  SVG REYID+FDGYSFKYPQNWIQVRG+ ADIFFRDPF
Sbjct: 77   ALIFSSYIFSRVGLHDVALAQPSVGFREYIDTFDGYSFKYPQNWIQVRGSGADIFFRDPF 136

Query: 666  ILDENXXXXXXXXXXXXXXXXEDLGPPEEAGKKVLRQYLTEFMSTRLGVKRESSILSTSS 487
            +LDEN                EDLG P+EAGKKVL+QYLTEFMSTRLGV+RES+I+STSS
Sbjct: 137  VLDENLSVELSSPSSSRYKSVEDLGQPQEAGKKVLQQYLTEFMSTRLGVRRESNIVSTSS 196

Query: 486  RIADDGKMYYQVEVNIKSYANNNELAVMPQDRVARLEWDRRYLSVLGVENNQLYELRLQV 307
            R+ADDG+ YYQVEVNIKSYANNNELAVMP DRV RLEWDRRYLSVLGVENN+LYELRLQ 
Sbjct: 197  RVADDGRTYYQVEVNIKSYANNNELAVMPTDRVTRLEWDRRYLSVLGVENNRLYELRLQT 256

Query: 306  PANVFVEEQNNLRRVMDSFRVNKVA 232
            P +VF+EE+N LR+VMDSFRVNK +
Sbjct: 257  PESVFLEEENELRQVMDSFRVNKAS 281


>ref|XP_002319475.1| predicted protein [Populus trichocarpa] gi|118485159|gb|ABK94442.1|
           unknown [Populus trichocarpa]
           gi|222857851|gb|EEE95398.1| predicted protein [Populus
           trichocarpa]
          Length = 265

 Score =  342 bits (877), Expect = 1e-91
 Identities = 176/251 (70%), Positives = 201/251 (80%), Gaps = 8/251 (3%)
 Frame = -2

Query: 963 ELTTPIYRRAS-VACSSSSTPNSS-------ELQTTKAFAVPRRKAMTLLLSGYIFSQAD 808
           +LT P   R + ++CS   +PNS+         Q TKAFAVPRR AM L+LS YIFS+  
Sbjct: 13  QLTHPTRSRPTWLSCSMPISPNSTCFSSIPHNKQLTKAFAVPRRNAMALILSSYIFSEVG 72

Query: 807 SHNTAFALQSVGLREYIDSFDGYSFKYPQNWIQVRGANADIFFRDPFILDENXXXXXXXX 628
            +N AFA +SVG REYID FDGYS K+PQNWIQVRGA ADIFFRDPF+LDEN        
Sbjct: 73  FNNIAFAQRSVGFREYIDQFDGYSLKHPQNWIQVRGAGADIFFRDPFVLDENLSVELSSP 132

Query: 627 XXXXXXXXEDLGPPEEAGKKVLRQYLTEFMSTRLGVKRESSILSTSSRIADDGKMYYQVE 448
                   EDLGPPEEAGKKVL+QYLTEFMSTRLGV+RES+I+STSSR+ADDGK+YYQVE
Sbjct: 133 SSSNYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNIISTSSRVADDGKLYYQVE 192

Query: 447 VNIKSYANNNELAVMPQDRVARLEWDRRYLSVLGVENNQLYELRLQVPANVFVEEQNNLR 268
           VNIKSYANNNELAVMPQ+RV RLEW+RRY+SVLGVENN+LYELRLQ P NVFVEE+N+LR
Sbjct: 193 VNIKSYANNNELAVMPQERVVRLEWNRRYMSVLGVENNRLYELRLQTPENVFVEEENDLR 252

Query: 267 RVMDSFRVNKV 235
           +VMDSFRVNKV
Sbjct: 253 QVMDSFRVNKV 263


>ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloroplast precursor, putative
            [Ricinus communis] gi|223548498|gb|EEF49989.1| Thylakoid
            lumenal 21.5 kDa protein, chloroplast precursor, putative
            [Ricinus communis]
          Length = 265

 Score =  338 bits (866), Expect = 2e-90
 Identities = 178/266 (66%), Positives = 202/266 (75%)
 Frame = -2

Query: 1032 PFSLSSATQPAVSWRREKLFSWPELTTPIYRRASVACSSSSTPNSSELQTTKAFAVPRRK 853
            P  L+S T+PA       L SW   + PI    S  C+S S  N    Q TKAFAVPRR 
Sbjct: 11   PVHLTSPTRPAF------LSSWFSCSLPI-SADSTRCTSISCKN----QPTKAFAVPRRS 59

Query: 852  AMTLLLSGYIFSQADSHNTAFALQSVGLREYIDSFDGYSFKYPQNWIQVRGANADIFFRD 673
             M L+ S  I S+   H++A A  SVG REYID+FDGYSFKYP+NWIQVRGA ADIFFRD
Sbjct: 60   TMALIFSSCILSEVGFHSSALAQSSVGFREYIDTFDGYSFKYPKNWIQVRGAGADIFFRD 119

Query: 672  PFILDENXXXXXXXXXXXXXXXXEDLGPPEEAGKKVLRQYLTEFMSTRLGVKRESSILST 493
            P++LDEN                EDLGPP+EAGKKVL+QYLTEFMSTRLGV+RES ILST
Sbjct: 120  PYVLDENLSVEMSSPSSSKYTSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRESDILST 179

Query: 492  SSRIADDGKMYYQVEVNIKSYANNNELAVMPQDRVARLEWDRRYLSVLGVENNQLYELRL 313
            SSR+ADDGK+YYQVEVNIKSYANNNE+AVMPQDRV RLEW+RRYLSVLGVENN+LYELRL
Sbjct: 180  SSRVADDGKLYYQVEVNIKSYANNNEMAVMPQDRVVRLEWNRRYLSVLGVENNRLYELRL 239

Query: 312  QVPANVFVEEQNNLRRVMDSFRVNKV 235
            Q P NVFVEE+N+LR+VM+SFRVNKV
Sbjct: 240  QTPENVFVEEENDLRQVMESFRVNKV 265


>emb|CBI39622.3| unnamed protein product [Vitis vinifera]
          Length = 248

 Score =  332 bits (852), Expect = 8e-89
 Identities = 170/248 (68%), Positives = 194/248 (78%)
 Frame = -2

Query: 975 FSWPELTTPIYRRASVACSSSSTPNSSELQTTKAFAVPRRKAMTLLLSGYIFSQADSHNT 796
           F +P+   P    A+   S+SS   S +LQTTK FAV RR AM L+ S YIFS+   H+ 
Sbjct: 3   FHYPDFPAPF---ATTNYSASSRAISCQLQTTKGFAVLRRDAMALIFSSYIFSRVGLHDV 59

Query: 795 AFALQSVGLREYIDSFDGYSFKYPQNWIQVRGANADIFFRDPFILDENXXXXXXXXXXXX 616
           A A  SVG REYID+FDGYSFKYPQNWIQVRG+ ADIFFRDPF+LDEN            
Sbjct: 60  ALAQPSVGFREYIDTFDGYSFKYPQNWIQVRGSGADIFFRDPFVLDENLSVELSSPSSSR 119

Query: 615 XXXXEDLGPPEEAGKKVLRQYLTEFMSTRLGVKRESSILSTSSRIADDGKMYYQVEVNIK 436
               EDLG P+EAGKKVL+QYLTEFMSTRLGV+RES+I+STSSR+ADDG+ YYQVEVNIK
Sbjct: 120 YKSVEDLGQPQEAGKKVLQQYLTEFMSTRLGVRRESNIVSTSSRVADDGRTYYQVEVNIK 179

Query: 435 SYANNNELAVMPQDRVARLEWDRRYLSVLGVENNQLYELRLQVPANVFVEEQNNLRRVMD 256
           SYANNNELAVMP DRV RLEWDRRYLSVLGVENN+LYELRLQ P +VF+EE+N LR+VMD
Sbjct: 180 SYANNNELAVMPTDRVTRLEWDRRYLSVLGVENNRLYELRLQTPESVFLEEENELRQVMD 239

Query: 255 SFRVNKVA 232
           SFRVNK +
Sbjct: 240 SFRVNKAS 247


>ref|XP_002330072.1| predicted protein [Populus trichocarpa] gi|222871497|gb|EEF08628.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  332 bits (852), Expect = 8e-89
 Identities = 165/212 (77%), Positives = 181/212 (85%)
 Frame = -2

Query: 870 AVPRRKAMTLLLSGYIFSQADSHNTAFALQSVGLREYIDSFDGYSFKYPQNWIQVRGANA 691
           AVPRR AM L+LS Y+FS+    N AFA QSVG REYID FDGYSFKYPQNWIQVRGA A
Sbjct: 1   AVPRRNAMALILSSYMFSEFGFDNLAFAQQSVGFREYIDQFDGYSFKYPQNWIQVRGAGA 60

Query: 690 DIFFRDPFILDENXXXXXXXXXXXXXXXXEDLGPPEEAGKKVLRQYLTEFMSTRLGVKRE 511
           DIFFRDPF+LDEN                EDLGPP+EAGKKVL+QYLTEFMSTRLGV+RE
Sbjct: 61  DIFFRDPFVLDENLSVELSSPSSSRYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRE 120

Query: 510 SSILSTSSRIADDGKMYYQVEVNIKSYANNNELAVMPQDRVARLEWDRRYLSVLGVENNQ 331
           S+ILSTSSR+ADDGK+YYQVEVNIKSYANNNELAVMP++RV RLEWDRRYLSVLGVENNQ
Sbjct: 121 SNILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPRERVVRLEWDRRYLSVLGVENNQ 180

Query: 330 LYELRLQVPANVFVEEQNNLRRVMDSFRVNKV 235
           LYELRLQ P NVFVEE+N+LR+VMDSFRVNK+
Sbjct: 181 LYELRLQTPENVFVEEENDLRKVMDSFRVNKI 212


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