BLASTX nr result

ID: Panax21_contig00033019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033019
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   515   e-144
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              515   e-144
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   507   e-141
ref|XP_002315703.1| predicted protein [Populus trichocarpa] gi|2...   472   e-131
ref|XP_002520197.1| helicase, putative [Ricinus communis] gi|223...   470   e-130

>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  515 bits (1327), Expect = e-144
 Identities = 252/304 (82%), Positives = 278/304 (91%)
 Frame = -1

Query: 1045 KLVESELGDLWCGEGSLETWSWSLNVPVLNSLSENDEVLKFSQAYHDAVECYKDQRNKVS 866
            +L +SELG LWC EGSLETWSWSLNVPVL+SLSE+DEVLK SQAY++AVECYK+QRNKVS
Sbjct: 871  ELAKSELGGLWCIEGSLETWSWSLNVPVLSSLSEDDEVLKMSQAYYEAVECYKEQRNKVS 930

Query: 865  RLKKKIARTEGFREYKKIVDMTKFTMEXXXXXXXXXXXXXXXIEQIEPSGWKEFLQVSNV 686
            RLKKKIARTEGF+EYKKI+DM+KFT E               IEQIEPSGWKEFLQVSNV
Sbjct: 931  RLKKKIARTEGFKEYKKIIDMSKFTEEKIKRLKARSNRLSSRIEQIEPSGWKEFLQVSNV 990

Query: 685  IHEIRALDINTHVIFPLGETAAAIRGENELWLAAVLRNKILLDLKPAQLAAVCGSLVSEG 506
            IHE RALDINTH+IFPLGETAAAIRGENELWLA VLR+K+LL LKPAQLAAVCGSLVSEG
Sbjct: 991  IHETRALDINTHIIFPLGETAAAIRGENELWLAMVLRSKVLLGLKPAQLAAVCGSLVSEG 1050

Query: 505  IKIRPWKNNSYIYEPSTTVLNVVNILDEQRSSILQLQEKHGVKIPCCLDSQFCGMVEAWA 326
            IK+RPWKNNSYIYE STTV+NV+++LDEQR+S+LQLQEKH V+IPCCLDSQF GMVEAWA
Sbjct: 1051 IKVRPWKNNSYIYEASTTVINVISLLDEQRNSLLQLQEKHDVQIPCCLDSQFSGMVEAWA 1110

Query: 325  SGLTWREIMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPLLQSNAVTASNIMDRPPMS 146
            SGLTWREIMMDCAMDEGDLARLLRRTID+LAQ+PKLPDIDPLLQSNA+TASN+MDRPP+S
Sbjct: 1111 SGLTWREIMMDCAMDEGDLARLLRRTIDILAQIPKLPDIDPLLQSNAMTASNVMDRPPIS 1170

Query: 145  ELAG 134
            ELAG
Sbjct: 1171 ELAG 1174


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  515 bits (1327), Expect = e-144
 Identities = 252/304 (82%), Positives = 278/304 (91%)
 Frame = -1

Query: 1045 KLVESELGDLWCGEGSLETWSWSLNVPVLNSLSENDEVLKFSQAYHDAVECYKDQRNKVS 866
            +L +SELG LWC EGSLETWSWSLNVPVL+SLSE+DEVLK SQAY++AVECYK+QRNKVS
Sbjct: 761  ELAKSELGGLWCIEGSLETWSWSLNVPVLSSLSEDDEVLKMSQAYYEAVECYKEQRNKVS 820

Query: 865  RLKKKIARTEGFREYKKIVDMTKFTMEXXXXXXXXXXXXXXXIEQIEPSGWKEFLQVSNV 686
            RLKKKIARTEGF+EYKKI+DM+KFT E               IEQIEPSGWKEFLQVSNV
Sbjct: 821  RLKKKIARTEGFKEYKKIIDMSKFTEEKIKRLKARSNRLSSRIEQIEPSGWKEFLQVSNV 880

Query: 685  IHEIRALDINTHVIFPLGETAAAIRGENELWLAAVLRNKILLDLKPAQLAAVCGSLVSEG 506
            IHE RALDINTH+IFPLGETAAAIRGENELWLA VLR+K+LL LKPAQLAAVCGSLVSEG
Sbjct: 881  IHETRALDINTHIIFPLGETAAAIRGENELWLAMVLRSKVLLGLKPAQLAAVCGSLVSEG 940

Query: 505  IKIRPWKNNSYIYEPSTTVLNVVNILDEQRSSILQLQEKHGVKIPCCLDSQFCGMVEAWA 326
            IK+RPWKNNSYIYE STTV+NV+++LDEQR+S+LQLQEKH V+IPCCLDSQF GMVEAWA
Sbjct: 941  IKVRPWKNNSYIYEASTTVINVISLLDEQRNSLLQLQEKHDVQIPCCLDSQFSGMVEAWA 1000

Query: 325  SGLTWREIMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPLLQSNAVTASNIMDRPPMS 146
            SGLTWREIMMDCAMDEGDLARLLRRTID+LAQ+PKLPDIDPLLQSNA+TASN+MDRPP+S
Sbjct: 1001 SGLTWREIMMDCAMDEGDLARLLRRTIDILAQIPKLPDIDPLLQSNAMTASNVMDRPPIS 1060

Query: 145  ELAG 134
            ELAG
Sbjct: 1061 ELAG 1064


>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  507 bits (1306), Expect = e-141
 Identities = 249/304 (81%), Positives = 274/304 (90%)
 Frame = -1

Query: 1045 KLVESELGDLWCGEGSLETWSWSLNVPVLNSLSENDEVLKFSQAYHDAVECYKDQRNKVS 866
            KL  SELG LWC EGSLETWSWSLNVPVL+SLSE DEVL+ SQAY+DAVECYK+QRNKVS
Sbjct: 856  KLAVSELGGLWCLEGSLETWSWSLNVPVLSSLSEEDEVLQLSQAYNDAVECYKNQRNKVS 915

Query: 865  RLKKKIARTEGFREYKKIVDMTKFTMEXXXXXXXXXXXXXXXIEQIEPSGWKEFLQVSNV 686
            RLKK+IARTEGF+EYKKI+D  KFT E               IEQIEP+GWKEFLQVSNV
Sbjct: 916  RLKKRIARTEGFKEYKKIIDSAKFTQEKIRRLKVRSKRLIGRIEQIEPTGWKEFLQVSNV 975

Query: 685  IHEIRALDINTHVIFPLGETAAAIRGENELWLAAVLRNKILLDLKPAQLAAVCGSLVSEG 506
            IHE RALDINTHVIFPLGETAAAIRGENELWLA VLRNK+LLDLKPAQLAAVCGSLVSEG
Sbjct: 976  IHESRALDINTHVIFPLGETAAAIRGENELWLAMVLRNKLLLDLKPAQLAAVCGSLVSEG 1035

Query: 505  IKIRPWKNNSYIYEPSTTVLNVVNILDEQRSSILQLQEKHGVKIPCCLDSQFCGMVEAWA 326
            I++RPWKNNS++YEPSTTVLNV+++L+E +SSIL+LQEKHGV+IPCCLDSQF GMVEAWA
Sbjct: 1036 IRLRPWKNNSFVYEPSTTVLNVIDLLEETKSSILELQEKHGVQIPCCLDSQFSGMVEAWA 1095

Query: 325  SGLTWREIMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPLLQSNAVTASNIMDRPPMS 146
            SGLTW+EIMMDCAMDEGDLARLLRRTIDLLAQ+PKLPDIDPLLQSNA  AS++MDRPP+S
Sbjct: 1096 SGLTWKEIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLLQSNAKGASSVMDRPPIS 1155

Query: 145  ELAG 134
            ELAG
Sbjct: 1156 ELAG 1159


>ref|XP_002315703.1| predicted protein [Populus trichocarpa] gi|222864743|gb|EEF01874.1|
            predicted protein [Populus trichocarpa]
          Length = 736

 Score =  472 bits (1215), Expect = e-131
 Identities = 230/304 (75%), Positives = 264/304 (86%)
 Frame = -1

Query: 1045 KLVESELGDLWCGEGSLETWSWSLNVPVLNSLSENDEVLKFSQAYHDAVECYKDQRNKVS 866
            KL ESELG LW  EGSLETWSWSLNVPVLNSLSE DEVL  SQAYHDAVE YKDQRNKV+
Sbjct: 433  KLAESELGGLWYMEGSLETWSWSLNVPVLNSLSEIDEVLHMSQAYHDAVESYKDQRNKVA 492

Query: 865  RLKKKIARTEGFREYKKIVDMTKFTMEXXXXXXXXXXXXXXXIEQIEPSGWKEFLQVSNV 686
            RLKK IARTEGF+EYK+I+D   FT +               +++IEPSGWKEFL++SNV
Sbjct: 493  RLKKTIARTEGFKEYKRILDWKNFTEDKIKRLKMRSNRLSERLQEIEPSGWKEFLKISNV 552

Query: 685  IHEIRALDINTHVIFPLGETAAAIRGENELWLAAVLRNKILLDLKPAQLAAVCGSLVSEG 506
            +HE RALDINT VIFPLGETAAAIRGENELWLA VLR++ILLDLKP QLAAVC S+VSEG
Sbjct: 553  VHESRALDINTQVIFPLGETAAAIRGENELWLAMVLRSRILLDLKPGQLAAVCASVVSEG 612

Query: 505  IKIRPWKNNSYIYEPSTTVLNVVNILDEQRSSILQLQEKHGVKIPCCLDSQFCGMVEAWA 326
            IK+R W+NN+YIYEPS+ V+NV+NIL+EQRS++ +LQEKHGV+I CCLDSQF GMVEAWA
Sbjct: 613  IKVRAWENNNYIYEPSSAVINVINILNEQRSNLSKLQEKHGVEITCCLDSQFSGMVEAWA 672

Query: 325  SGLTWREIMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPLLQSNAVTASNIMDRPPMS 146
            +GLTW+E+MMDCAMD+GDLARLLRRTID+LAQ+PKLPDIDP+LQSNA TAS+IMDRPP+S
Sbjct: 673  AGLTWKEMMMDCAMDDGDLARLLRRTIDILAQIPKLPDIDPVLQSNAKTASSIMDRPPIS 732

Query: 145  ELAG 134
            EL G
Sbjct: 733  ELTG 736


>ref|XP_002520197.1| helicase, putative [Ricinus communis] gi|223540689|gb|EEF42252.1|
            helicase, putative [Ricinus communis]
          Length = 1161

 Score =  470 bits (1209), Expect = e-130
 Identities = 234/304 (76%), Positives = 262/304 (86%)
 Frame = -1

Query: 1045 KLVESELGDLWCGEGSLETWSWSLNVPVLNSLSENDEVLKFSQAYHDAVECYKDQRNKVS 866
            KL +SELG LW  EGSLETWSWSLNVPVLNSLSENDEVL  SQAYHDAVE YK QR KV+
Sbjct: 858  KLADSELGGLWYMEGSLETWSWSLNVPVLNSLSENDEVLHGSQAYHDAVEHYKGQRTKVA 917

Query: 865  RLKKKIARTEGFREYKKIVDMTKFTMEXXXXXXXXXXXXXXXIEQIEPSGWKEFLQVSNV 686
            RLKKKIARTEGFREYKKI+D   FT +               IE+IEPSGWKEFL++SNV
Sbjct: 918  RLKKKIARTEGFREYKKILDWKSFTEDKIKRLKARSNRLINRIEEIEPSGWKEFLKISNV 977

Query: 685  IHEIRALDINTHVIFPLGETAAAIRGENELWLAAVLRNKILLDLKPAQLAAVCGSLVSEG 506
            +HEIRALDINT VIFPLGETAAAIRGENELWLA VLR+KILLDLKPAQLAAVC S+VSEG
Sbjct: 978  VHEIRALDINTQVIFPLGETAAAIRGENELWLAMVLRSKILLDLKPAQLAAVCASVVSEG 1037

Query: 505  IKIRPWKNNSYIYEPSTTVLNVVNILDEQRSSILQLQEKHGVKIPCCLDSQFCGMVEAWA 326
            IK+R W+NNSYIYEPS+ V N++  L+EQRSS+LQLQEKHGV+I C LDSQF GMVEAWA
Sbjct: 1038 IKVRAWENNSYIYEPSSAVFNIIGKLEEQRSSLLQLQEKHGVEISCYLDSQFSGMVEAWA 1097

Query: 325  SGLTWREIMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPLLQSNAVTASNIMDRPPMS 146
            SGL+W+E+MMDCAMD+GDLARL+R+TIDLLAQ+PKLPDIDP LQSNA TA +IMDRPP+S
Sbjct: 1098 SGLSWKEMMMDCAMDDGDLARLIRQTIDLLAQIPKLPDIDPALQSNAKTAYDIMDRPPIS 1157

Query: 145  ELAG 134
            EL+G
Sbjct: 1158 ELSG 1161


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