BLASTX nr result

ID: Panax21_contig00033008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033008
         (1635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...   141   4e-31
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g...   129   2e-27
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...   125   3e-26
ref|XP_003628780.1| F-box family protein [Medicago truncatula] g...   117   7e-24
ref|XP_003614879.1| hypothetical protein MTR_5g060750 [Medicago ...   108   4e-21

>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  141 bits (356), Expect = 4e-31
 Identities = 106/352 (30%), Positives = 173/352 (49%), Gaps = 24/352 (6%)
 Frame = -3

Query: 1633 IEIKEAVQTCVLSRRWNRIWTTLPHLNFGYT---------HFRIDGVSYVKFVEEFLSKR 1481
            ++  + VQTCVLS+RW  +W + P+L+F +          ++  + V++  F+ + L +R
Sbjct: 33   VDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYEDEMVNFTDFINQVLVRR 92

Query: 1480 NHSAEVSTIWLNLSYFRPDFIESTVNYAVSHNVKEF--RTYSADFRIEFPPWSFPV--LT 1313
            N+   +        + R   +ES + YAV H+ +E    T   D  I  P   F    L 
Sbjct: 93   NNFKAIKISLDLCGHTRYSLVESLIYYAVKHHAEEICIDTACRDVPIVLPRCFFNCESLR 152

Query: 1312 TLHLKSCRDVPL-MSWSLPTLTTLHLEDVTFQKDRVLSFEGFVHLKNLSLKGSFTWHGME 1136
            +L L+    + L  S  LP+L TLHL        ++  F    +L+NL+++     + +E
Sbjct: 153  SLKLRIDGGIALPKSLGLPSLKTLHLGGAQNFDGKI--FSSCPNLENLTIE-DICLNTIE 209

Query: 1135 VLFITSLGLANLTISQYQYYGDLRSCLFVISAPNLLCLEYSGNTPLLLSAQDGFPCLEQV 956
               I +L L +L I  ++Y   +R C  ++ AP L   ++ GNTPL  S +     L+ V
Sbjct: 210  NFNIHALNLKSLEILNWRYSRIMRGCKVMLFAPKLTSFKFDGNTPLFWS-EVNLTSLDDV 268

Query: 955  NLDIQIDIYRYEKEYF----------DENKQVIFQQLITLFQEIHGAKFLTLSLNTIQVI 806
            N+ +Q   YR++ +++          DE KQ     L+ +  +   AK LTLS+N I+V+
Sbjct: 269  NVVLQRYYYRHDYQFYVDEDEYISGEDETKQGFCLDLLKMLHQFCSAKSLTLSMNIIEVL 328

Query: 805  SWDPHFSEYPPSPFGNLKCLKLKDEFRFGFSNSTFPSQVRNYLLGSSPSARI 650
            S  P      PSPF NLK LKLK + +    + T P+ V NY L SS   ++
Sbjct: 329  SKVPAALNKHPSPFSNLKYLKLKTDHK----DVTLPAHVLNYFLSSSSLLKV 376


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
            gi|222873902|gb|EEF11033.1| f-box family protein [Populus
            trichocarpa]
          Length = 453

 Score =  129 bits (325), Expect = 2e-27
 Identities = 110/347 (31%), Positives = 169/347 (48%), Gaps = 24/347 (6%)
 Frame = -3

Query: 1633 IEIKEAVQTCVLSRRWNRIWTTLPHLNFGYTHFRI--------DGVS-YVKFVEEFLSKR 1481
            ++  + VQTCVLS+RW  +W + P+L+F +  F          D V+ +  F+   L +R
Sbjct: 52   VDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYDDEVNNFTDFIYHVLVRR 111

Query: 1480 NHSAEVSTIWLNLSYFRPDFIESTVNYAVSHNVKEFRTYSA--DFRIEFPPWSFPV--LT 1313
            ++   V      L   R   +ES + YAV H+V+E    +A  D  I  P   F    L 
Sbjct: 112  HNLKAVKISLDILRDTRCSLVESLIYYAVKHHVEEISVNTAHWDMPIVLPRCFFDCESLR 171

Query: 1312 TLHLKSCRDVPL-MSWSLPTLTTLHLEDVTFQKDRVLSFEGFVHLKNLSLKGSFTWHGME 1136
            +L LK    + L  S  L +L TLHL        ++  F    +L+NL ++  +  + +E
Sbjct: 172  SLKLKVDGGIALPKSLGLQSLKTLHLGGARNFDGKI--FSTCPNLENLKIEDIYL-NTIE 228

Query: 1135 VLFITSLGLANLTISQYQYYGDLRSCLFVISAPNLLCLEYSGNTPLLLSAQDGFPCLEQV 956
               I +L L +L I  ++Y   +R C  ++ AP L   ++ GNTPL  S +     L+ V
Sbjct: 229  NFNIHALNLKSLEILNWRYGRIMRGCKVMLFAPKLTSFKFYGNTPLFWS-EVNLTSLDDV 287

Query: 955  NLDIQ-------IDIYRYEKEYF---DENKQVIFQQLITLFQEIHGAKFLTLSLNTIQVI 806
            N+ +Q          Y  E EY    DE +Q +   LI +  +   AK LTLS+N I+++
Sbjct: 288  NVVLQRYQHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEIL 347

Query: 805  SWDPHFSEYPPSPFGNLKCLKLKDEFRFGFSNSTFPSQVRNYLLGSS 665
            S  P   +  PSPF NLK LKLK + +    + T P+ V NY L S+
Sbjct: 348  SEVPAALDKHPSPFSNLKYLKLKTDHK----DVTLPAHVLNYFLRSA 390


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
            gi|222873903|gb|EEF11034.1| f-box family protein [Populus
            trichocarpa]
          Length = 453

 Score =  125 bits (314), Expect = 3e-26
 Identities = 110/350 (31%), Positives = 169/350 (48%), Gaps = 27/350 (7%)
 Frame = -3

Query: 1633 IEIKEAVQTCVLSRRWNRIWTTLPHLNFGYTHFRI---------DGVSYVKFVEEFLSKR 1481
            ++  + VQTCVLS+RW  +W + P+L+F +  F           D  ++  F+   L +R
Sbjct: 52   VDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYDDDMNNFTDFIYHVLVRR 111

Query: 1480 NHSAEVSTIWLNLSYFRP---DFIESTVNYAVSHNVKEFRTYSA--DFRIEFPPWSFPV- 1319
            N+   V    L+L   R      +ES + YAV H+V+E    +A  D  I  P   F   
Sbjct: 112  NN---VKAFKLSLDTRRDCQYSVVESLIYYAVKHHVEEISINTAHWDVPIVLPRCFFDCE 168

Query: 1318 -LTTLHLKSCRDVPL-MSWSLPTLTTLHLEDVTFQKDRVLSFEGFVHLKNLSLKGSFTWH 1145
             L +L LK    + L  S  L +L TLHL        ++  F    +L+NL+++     +
Sbjct: 169  SLRSLKLKVDGGLALPKSLGLQSLKTLHLGGAQNFDGKI--FSSCPNLENLTIE-DICLN 225

Query: 1144 GMEVLFITSLGLANLTISQYQYYGDLRSCLFVISAPNLLCLEYSGNTPLLLSAQDGFPCL 965
             +E   I +L L +L I  ++Y    + C  ++ AP L   ++ GNTPL  S  +    L
Sbjct: 226  VIENFNIHALSLKSLEILNWRYNRIKQGCKVMLVAPKLTSFKFDGNTPLFWSDVN-LTSL 284

Query: 964  EQVNLDIQ-------IDIYRYEKEYF---DENKQVIFQQLITLFQEIHGAKFLTLSLNTI 815
            + VN+ +Q          Y  E EY    DE +Q +   LI +  +   AK LTLS+N I
Sbjct: 285  DDVNVVLQRYHHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQFCSAKSLTLSMNII 344

Query: 814  QVISWDPHFSEYPPSPFGNLKCLKLKDEFRFGFSNSTFPSQVRNYLLGSS 665
            +++S  P   +  PSPF NLK LKLK + +    + T P+ V NY L S+
Sbjct: 345  EILSEVPAALDKHPSPFSNLKYLKLKTDHK----DVTLPAHVLNYFLRSA 390


>ref|XP_003628780.1| F-box family protein [Medicago truncatula]
            gi|355522802|gb|AET03256.1| F-box family protein
            [Medicago truncatula]
          Length = 451

 Score =  117 bits (294), Expect = 7e-24
 Identities = 113/367 (30%), Positives = 165/367 (44%), Gaps = 39/367 (10%)
 Frame = -3

Query: 1633 IEIKEAVQTCVLSRRWNRIWTTLPHLNFGYTHFRIDGVSYVKFVEEFLSKRNHSAEVSTI 1454
            +E K AVQT +LS RWN +W  LP L    +HF+    S+ KFV   LS R+ S  + T+
Sbjct: 97   LETKHAVQTTILSTRWNNLWKRLPTLRLNSSHFK-TLKSFTKFVSRVLSLRDDSTALHTL 155

Query: 1453 WL-NLSYFRPDFIESTVNYAVSHNVKEFRTYSADFRIEFPPWSFP--VLTTLHLKSC--- 1292
            +        P  +   V YA SHNV+    +     + FPP+ F    LT+L+L S    
Sbjct: 156  YFQRKGCVEPPILSKLVEYAASHNVQRLDIFVRCDGVYFPPYFFKCNTLTSLNLSSSPIP 215

Query: 1291 ----RDVPLMSWSLPTLTTLHLEDVTF---QKDRVLSFEGFVHLKNLSLKGSFTWHGMEV 1133
                +  P +  +LP LT+L L+   F      RV  F  F  L  L L+ +    G+  
Sbjct: 216  NTAKKPFPSL-MTLPALTSLSLQWFAFHGNNSGRVEPFSRFKRLNTLILE-NCQIVGVPN 273

Query: 1132 LFITSLGLANLTISQYQYYGDLRSCLFVISAPNLLCLEYSGNTPLLLSAQDGFPCLEQVN 953
            L I+S  LANLTI       D   C   +SAP+L    ++GN PL +        +E V+
Sbjct: 274  LCISSTTLANLTIQSNDGLSDF--CGIELSAPSLCTFSFTGN-PLEIRYGSRLSSIEHVS 330

Query: 952  LDIQIDIYRYEKEYFDENKQVIFQQLITLFQEIHGAKFLTLSLNTIQVISWDPHFSEYPP 773
            +D+ +    +  E F     V+   LI    E    K L +S  T+QV+S  P   +   
Sbjct: 331  IDVNV---AWISEKF---PSVLLSWLI----EFSSIKSLAVSSTTLQVLSVVPDLLKVEF 380

Query: 772  SPFGNLKCLKLK-DEFRFGFS-------------------------NSTFPSQVRNYLLG 671
            S   NLK LK+K  +F  G S                         +S+ P  + ++LL 
Sbjct: 381  SSLCNLKSLKVKMRQFTDGLSRTLIEANISQLLSRLEEAFKERSKTHSSIPDGIVDFLLQ 440

Query: 670  SSPSARI 650
            +SPSA++
Sbjct: 441  NSPSAKV 447


>ref|XP_003614879.1| hypothetical protein MTR_5g060750 [Medicago truncatula]
            gi|355516214|gb|AES97837.1| hypothetical protein
            MTR_5g060750 [Medicago truncatula]
          Length = 370

 Score =  108 bits (270), Expect = 4e-21
 Identities = 97/341 (28%), Positives = 154/341 (45%), Gaps = 12/341 (3%)
 Frame = -3

Query: 1633 IEIKEAVQTCVLSRRWNRIWTTLPHLNFGYTHFRIDGVSYVKFVEEFLSKRNHSAEVSTI 1454
            ++ K AVQTC+LS RWN +W  L  L     HF  +   + KFV   LS RN +  +  +
Sbjct: 35   LDTKHAVQTCILSPRWNNLWKHLSSLKLSSIHFPKNLKGFTKFVSHVLSLRNDTTSLLAL 94

Query: 1453 WLNLS-YFRPDFIESTVNYAVSHNVKEFRTYSADFRIEFPP--WSFPVLTTLHLK----S 1295
              + S    P  ++  + YA SHNV++ +        +F P  +S   LTTL LK    S
Sbjct: 95   DFHRSGTMDPRLLKRILKYAFSHNVQQLQVDVKCVNPQFSPSFFSCHTLTTLKLKIDYYS 154

Query: 1294 CRDVPLMSWSLPTLTTLHLEDVTF---QKDRVLSFEGFVHLKNLSLKGSFTWHGMEVLFI 1124
             +++   S +LP +T L L    F      RV  F     L  L + G      +  L I
Sbjct: 155  HQNLFPTSLNLPQITNLSLHRFIFCVGDDGRVNPFSTLNKLNTLVITGCIVRDYLN-LCI 213

Query: 1123 TSLGLANLTISQYQYYGDLRSCLFVISAPNLLCLEYSGNTPL--LLSAQDGFPCLEQVNL 950
             +  LANL I       +++   F +S PNL    Y G  PL  L  +      +E VNL
Sbjct: 214  VNATLANLRIQSGFSMSEMK---FQLSTPNLCTFVYRGYDPLQKLCESNINLSSIEHVNL 270

Query: 949  DIQIDIYRYEKEYFDENKQVIFQQLITLFQEIHGAKFLTLSLNTIQVISWDPHFSEYPPS 770
            ++++ +   E   F          L+    E+   K L+++  T++V+S  P+  +    
Sbjct: 271  NVEMWVTYIESPLF----------LLNWLVELGNMKSLSVTSRTLKVLSLVPNLLKVEFP 320

Query: 769  PFGNLKCLKLKDEFRFGFSNSTFPSQVRNYLLGSSPSARII 647
               NLK LK++         S+ P  +  +LL ++PSA+++
Sbjct: 321  TLYNLKSLKVE------MGGSSIPKGLVEFLLQNAPSAKLM 355


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