BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033005
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28799.3| unnamed protein product [Vitis vinifera]              146   3e-33
ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261...   141   8e-32
ref|NP_850189.5| RRP6-like protein 3 [Arabidopsis thaliana] gi|3...   132   5e-29
gb|ABX52081.1| RRP6-like protein 3 [Arabidopsis thaliana]             132   5e-29
ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communi...   132   6e-29

>emb|CBI28799.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score =  146 bits (368), Expect = 3e-33
 Identities = 73/139 (52%), Positives = 90/139 (64%), Gaps = 10/139 (7%)
 Frame = +3

Query: 60   EASVNDGKHLNSDDMEASQTTSERKVAIYDSD---TNSECKGPL-------NGTVXXXXX 209
            E   +D  +L+SD    S+T+  + + + D+D   + S+ +G L       NG       
Sbjct: 799  EVLASDSNNLSSD---RSETSEMKDMCVMDTDNCESRSQSEGTLDLFYPKSNGNASPKHN 855

Query: 210  XXXXXXGHGPHGKQVVDHLLKEYGDDGILEFCQRWRKVFVDTIHPRFLPAGWDVTHSGRR 389
                  GHGPHGK+VVDHLLKEYG+DGI +FCQRWR+ FV+ IHPRFLPAGWDV HSGRR
Sbjct: 856  PKLSLLGHGPHGKEVVDHLLKEYGEDGIRQFCQRWRQTFVEAIHPRFLPAGWDVMHSGRR 915

Query: 390  DFGEFSVYNPTKKGSAATN 446
            DFGEFSVYNP KK  A  N
Sbjct: 916  DFGEFSVYNPDKKAFAPAN 934


>ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261955 [Vitis vinifera]
          Length = 936

 Score =  141 bits (356), Expect = 8e-32
 Identities = 73/140 (52%), Positives = 87/140 (62%), Gaps = 13/140 (9%)
 Frame = +3

Query: 72   NDGKHLNSDDMEASQTTSERKV---AIYDSD---TNSECKGPL-------NGTVXXXXXX 212
            N  +  N+  M  S   +  KV    + D+D   + S+ +G L       NG        
Sbjct: 748  NKEQESNARSMGTSPIDNALKVDDMCVMDTDNCESRSQSEGTLDLFYPKSNGNASPKHNP 807

Query: 213  XXXXXGHGPHGKQVVDHLLKEYGDDGILEFCQRWRKVFVDTIHPRFLPAGWDVTHSGRRD 392
                 GHGPHGK+VVDHLLKEYG+DGI +FCQRWR+ FV+ IHPRFLPAGWDV HSGRRD
Sbjct: 808  KLSLLGHGPHGKEVVDHLLKEYGEDGIRQFCQRWRQTFVEAIHPRFLPAGWDVMHSGRRD 867

Query: 393  FGEFSVYNPTKKGSAATNIS 452
            FGEFSVYNP KK  A  N+S
Sbjct: 868  FGEFSVYNPDKKAFAPANVS 887


>ref|NP_850189.5| RRP6-like protein 3 [Arabidopsis thaliana]
            gi|330253588|gb|AEC08682.1| RRP6-like protein 3
            [Arabidopsis thaliana]
          Length = 891

 Score =  132 bits (332), Expect = 5e-29
 Identities = 65/126 (51%), Positives = 78/126 (61%), Gaps = 7/126 (5%)
 Frame = +3

Query: 72   NDGKHLNSDDMEASQTTSERKVAIYDSDTNSECKGP-------LNGTVXXXXXXXXXXXG 230
            NDG+ L   D E   T     V     D  SE  G         NG             G
Sbjct: 764  NDGEALA--DFEKIMTVERSTVVDDSGDGTSEGDGAKELNDTQCNGNTLHQQNSKLSLLG 821

Query: 231  HGPHGKQVVDHLLKEYGDDGILEFCQRWRKVFVDTIHPRFLPAGWDVTHSGRRDFGEFSV 410
            HGPHGKQ+V++LL+E+G+DG+ +FCQRWRKVFVD +HPR LP GW+V+HSGRRDFGEFSV
Sbjct: 822  HGPHGKQIVEYLLREHGEDGVRDFCQRWRKVFVDAVHPRHLPGGWNVSHSGRRDFGEFSV 881

Query: 411  YNPTKK 428
            YNPTK+
Sbjct: 882  YNPTKR 887


>gb|ABX52081.1| RRP6-like protein 3 [Arabidopsis thaliana]
          Length = 892

 Score =  132 bits (332), Expect = 5e-29
 Identities = 65/126 (51%), Positives = 78/126 (61%), Gaps = 7/126 (5%)
 Frame = +3

Query: 72   NDGKHLNSDDMEASQTTSERKVAIYDSDTNSECKGP-------LNGTVXXXXXXXXXXXG 230
            NDG+ L   D E   T     V     D  SE  G         NG             G
Sbjct: 765  NDGEALA--DFEKIMTVERSTVVDDSGDGTSEGDGAKELNDTQCNGNTLHQQNSKLSLLG 822

Query: 231  HGPHGKQVVDHLLKEYGDDGILEFCQRWRKVFVDTIHPRFLPAGWDVTHSGRRDFGEFSV 410
            HGPHGKQ+V++LL+E+G+DG+ +FCQRWRKVFVD +HPR LP GW+V+HSGRRDFGEFSV
Sbjct: 823  HGPHGKQIVEYLLREHGEDGVRDFCQRWRKVFVDAVHPRHLPGGWNVSHSGRRDFGEFSV 882

Query: 411  YNPTKK 428
            YNPTK+
Sbjct: 883  YNPTKR 888


>ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis]
            gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative
            [Ricinus communis]
          Length = 977

 Score =  132 bits (331), Expect = 6e-29
 Identities = 62/95 (65%), Positives = 69/95 (72%), Gaps = 22/95 (23%)
 Frame = +3

Query: 228  GHGPHGKQVVDHLLKEYGDDGILEFCQRWRKVFVDTIHPRFLPAGWDVTH---------- 377
            GHGPHGKQVV+HLLKEYGDDGI EFCQRWR+VFV+ +HPRFLPAGWDV H          
Sbjct: 883  GHGPHGKQVVEHLLKEYGDDGIREFCQRWRQVFVEAVHPRFLPAGWDVMHRQCPEHNTQS 942

Query: 378  ------------SGRRDFGEFSVYNPTKKGSAATN 446
                        SGRR+FGEFSVYNPTK+ SAAT+
Sbjct: 943  TILDLIVSAVFASGRREFGEFSVYNPTKRASAATS 977