BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00033004
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22025.3| unnamed protein product [Vitis vinifera]              345   7e-93
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   345   7e-93
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   323   4e-86
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi...   321   1e-85
sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-c...   277   2e-72

>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  345 bits (885), Expect = 7e-93
 Identities = 172/246 (69%), Positives = 198/246 (80%)
 Frame = -1

Query: 738 EFTHLCSKGRLKEAFETFKADIWSDPNLFSLLLQGCIQTHSFPLAKQLHSLIITSGCSSD 559
           EFT+LCSKG LK+AF+ F + IWS+P+LFS LLQ CI  +S  L KQLHSLIITSGCSSD
Sbjct: 27  EFTNLCSKGHLKQAFDRFSSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSD 86

Query: 558 KFVSNHLLNVYSKFGELKTAVALFDVMPRKNIMTCNILIGGYVQIGDLDSARNLFDEMTK 379
           KF+SNHLLN+YSK G+L TA+ LF VMPRKNIM+CNILI GY + GD  +AR +FDEM +
Sbjct: 87  KFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPE 146

Query: 378 RNNATWNAMVAGLTQFEFNEEGLSLYSKMLESGFFPDEFTFGSVLRGCAGLKDLNMGRQV 199
           RN ATWNAMVAGL QFEFNEEGL L+S+M E GF PDEF  GSVLRGCAGL+ L  GRQV
Sbjct: 147 RNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQV 206

Query: 198 HGSVVKYGLELNLVVGTSLAHMYMKSGNLGEGERVIKGMPVHSVVACNTIIAGRAQHGLS 19
           HG V K G E NLVV +SLAHMYMK G+LGEGER+I+ MP  +VVA NT+IAGRAQ+G  
Sbjct: 207 HGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYP 266

Query: 18  EAALDQ 1
           E  LDQ
Sbjct: 267 EEVLDQ 272



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 52/155 (33%), Positives = 77/155 (49%)
 Frame = -1

Query: 468 NIMTCNILIGGYVQIGDLDSARNLFDEMTKRNNATWNAMVAGLTQFEFNEEGLSLYSKML 289
           N++  + L   Y++ G L     L   M  +N   WN ++AG  Q  + EE L  Y+ M 
Sbjct: 218 NLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMK 277

Query: 288 ESGFFPDEFTFGSVLRGCAGLKDLNMGRQVHGSVVKYGLELNLVVGTSLAHMYMKSGNLG 109
            +GF PD+ TF SV+  C+ L  L  G+Q+H  V+K G  L + V +SL  MY + G L 
Sbjct: 278 MAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLE 337

Query: 108 EGERVIKGMPVHSVVACNTIIAGRAQHGLSEAALD 4
              +V        VV  +++IA    HG    A+D
Sbjct: 338 YSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAID 372


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  345 bits (885), Expect = 7e-93
 Identities = 172/246 (69%), Positives = 198/246 (80%)
 Frame = -1

Query: 738 EFTHLCSKGRLKEAFETFKADIWSDPNLFSLLLQGCIQTHSFPLAKQLHSLIITSGCSSD 559
           EFT+LCSKG LK+AF+ F + IWS+P+LFS LLQ CI  +S  L KQLHSLIITSGCSSD
Sbjct: 27  EFTNLCSKGHLKQAFDRFSSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSD 86

Query: 558 KFVSNHLLNVYSKFGELKTAVALFDVMPRKNIMTCNILIGGYVQIGDLDSARNLFDEMTK 379
           KF+SNHLLN+YSK G+L TA+ LF VMPRKNIM+CNILI GY + GD  +AR +FDEM +
Sbjct: 87  KFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPE 146

Query: 378 RNNATWNAMVAGLTQFEFNEEGLSLYSKMLESGFFPDEFTFGSVLRGCAGLKDLNMGRQV 199
           RN ATWNAMVAGL QFEFNEEGL L+S+M E GF PDEF  GSVLRGCAGL+ L  GRQV
Sbjct: 147 RNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQV 206

Query: 198 HGSVVKYGLELNLVVGTSLAHMYMKSGNLGEGERVIKGMPVHSVVACNTIIAGRAQHGLS 19
           HG V K G E NLVV +SLAHMYMK G+LGEGER+I+ MP  +VVA NT+IAGRAQ+G  
Sbjct: 207 HGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYP 266

Query: 18  EAALDQ 1
           E  LDQ
Sbjct: 267 EEVLDQ 272



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 52/155 (33%), Positives = 77/155 (49%)
 Frame = -1

Query: 468 NIMTCNILIGGYVQIGDLDSARNLFDEMTKRNNATWNAMVAGLTQFEFNEEGLSLYSKML 289
           N++  + L   Y++ G L     L   M  +N   WN ++AG  Q  + EE L  Y+ M 
Sbjct: 218 NLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMK 277

Query: 288 ESGFFPDEFTFGSVLRGCAGLKDLNMGRQVHGSVVKYGLELNLVVGTSLAHMYMKSGNLG 109
            +GF PD+ TF SV+  C+ L  L  G+Q+H  V+K G  L + V +SL  MY + G L 
Sbjct: 278 MAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLE 337

Query: 108 EGERVIKGMPVHSVVACNTIIAGRAQHGLSEAALD 4
              +V        VV  +++IA    HG    A+D
Sbjct: 338 YSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAID 372


>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  323 bits (827), Expect = 4e-86
 Identities = 154/251 (61%), Positives = 203/251 (80%)
 Frame = -1

Query: 753 SSNRDEFTHLCSKGRLKEAFETFKADIWSDPNLFSLLLQGCIQTHSFPLAKQLHSLIITS 574
           S++  EFT LC+ GR+K+A++TF ++IWSDP+LFS LLQ CI+  S    KQ+HSLIITS
Sbjct: 32  SASLQEFTSLCNDGRIKQAYDTFTSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITS 91

Query: 573 GCSSDKFVSNHLLNVYSKFGELKTAVALFDVMPRKNIMTCNILIGGYVQIGDLDSARNLF 394
           G S DKF+SNHLLN YSK G+ K+++ LF  MPR+N+M+ NILI GY+Q+GDL+SA+ LF
Sbjct: 92  GGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLF 151

Query: 393 DEMTKRNNATWNAMVAGLTQFEFNEEGLSLYSKMLESGFFPDEFTFGSVLRGCAGLKDLN 214
           DEM++RN ATWNAM+AGLTQFEFN++ LSL+ +M   GF PDEFT GSVLRGCAGL+ L 
Sbjct: 152 DEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLL 211

Query: 213 MGRQVHGSVVKYGLELNLVVGTSLAHMYMKSGNLGEGERVIKGMPVHSVVACNTIIAGRA 34
            G++VH  ++K G EL+ VVG+SLAHMY+KSG+L +GE++IK MP+ +VVA NT+IAG+A
Sbjct: 212 AGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKA 271

Query: 33  QHGLSEAALDQ 1
           Q+G  E  L+Q
Sbjct: 272 QNGCPEEVLNQ 282



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 2/222 (0%)
 Frame = -1

Query: 663 PNLFSL--LLQGCIQTHSFPLAKQLHSLIITSGCSSDKFVSNHLLNVYSKFGELKTAVAL 490
           P+ F+L  +L+GC    S    +++H+ ++  G      V + L ++Y            
Sbjct: 192 PDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMY------------ 239

Query: 489 FDVMPRKNIMTCNILIGGYVQIGDLDSARNLFDEMTKRNNATWNAMVAGLTQFEFNEEGL 310
                              ++ G L     L   M  R    WN ++AG  Q    EE L
Sbjct: 240 -------------------IKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVL 280

Query: 309 SLYSKMLESGFFPDEFTFGSVLRGCAGLKDLNMGRQVHGSVVKYGLELNLVVGTSLAHMY 130
           + Y+ M  +GF PD+ TF SVL  C+ L  L  G+Q+H  V+K G    L V +SL  MY
Sbjct: 281 NQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMY 340

Query: 129 MKSGNLGEGERVIKGMPVHSVVACNTIIAGRAQHGLSEAALD 4
            +SG L +  +         VV  +++IA    HG  E AL+
Sbjct: 341 SRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALE 382


>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  321 bits (823), Expect = 1e-85
 Identities = 159/251 (63%), Positives = 195/251 (77%)
 Frame = -1

Query: 753 SSNRDEFTHLCSKGRLKEAFETFKADIWSDPNLFSLLLQGCIQTHSFPLAKQLHSLIITS 574
           S   ++F  LCSKG ++EAFE+F ++IW++P LFS LLQ CI   S  L KQLHSLI TS
Sbjct: 39  SDGNEQFATLCSKGHIREAFESFLSEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTS 98

Query: 573 GCSSDKFVSNHLLNVYSKFGELKTAVALFDVMPRKNIMTCNILIGGYVQIGDLDSARNLF 394
           GCSSDKF+SNHLLN+YSKFGEL+ AVALFD MPR+NIM+CNI+I  Y+ +G+L+SA+NLF
Sbjct: 99  GCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLF 158

Query: 393 DEMTKRNNATWNAMVAGLTQFEFNEEGLSLYSKMLESGFFPDEFTFGSVLRGCAGLKDLN 214
           DEM  RN ATWNAMV GLT+FE NEE L L+S+M E  F PDE++ GSVLRGCA L  L 
Sbjct: 159 DEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALL 218

Query: 213 MGRQVHGSVVKYGLELNLVVGTSLAHMYMKSGNLGEGERVIKGMPVHSVVACNTIIAGRA 34
            G+QVH  V+K G E NLVVG SLAHMYMK+G++ +GERVI  MP  S+VA NT+++G+A
Sbjct: 219 AGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKA 278

Query: 33  QHGLSEAALDQ 1
           Q G  E  LDQ
Sbjct: 279 QKGYFEGVLDQ 289



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 2/221 (0%)
 Frame = -1

Query: 663 PNLFSL--LLQGCIQTHSFPLAKQLHSLIITSGCSSDKFVSNHLLNVYSKFGELKTAVAL 490
           P+ +SL  +L+GC    +    +Q+H+ ++  G   +  V   L ++Y K G +     +
Sbjct: 199 PDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERV 258

Query: 489 FDVMPRKNIMTCNILIGGYVQIGDLDSARNLFDEMTKRNNATWNAMVAGLTQFEFNEEGL 310
            + MP      C+++                           WN +++G  Q  + E  L
Sbjct: 259 INWMP-----DCSLV--------------------------AWNTLMSGKAQKGYFEGVL 287

Query: 309 SLYSKMLESGFFPDEFTFGSVLRGCAGLKDLNMGRQVHGSVVKYGLELNLVVGTSLAHMY 130
             Y  M  +GF PD+ TF SV+  C+ L  L  G+Q+H   VK G    + V +SL  MY
Sbjct: 288 DQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMY 347

Query: 129 MKSGNLGEGERVIKGMPVHSVVACNTIIAGRAQHGLSEAAL 7
            + G L +  +         VV  +++IA    HG  E A+
Sbjct: 348 SRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAI 388



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 3/222 (1%)
 Frame = -1

Query: 666 DPNLFSLLLQGCIQTHSFPLAKQLHSLIITSGCSSDKFVSNHLLNVYSKFGELKTAVALF 487
           D   F  ++  C +       KQ+H+  + +G SS+  V + L+++YS+ G L+ ++   
Sbjct: 301 DKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSI--- 357

Query: 486 DVMPRKNIMTCNILIGGYVQIGDLDSARNLFDEMTKRNNATWNAMVAGLTQFEFNEEGLS 307
                                         F E  +R+   W++M+A        EE + 
Sbjct: 358 ----------------------------KTFLECKERDVVLWSSMIAAYGFHGQGEEAIK 389

Query: 306 LYSKMLESGFFPDEFTFGSVLRGCA--GLKDLNMGRQVHGSVVKYGLELNLVVGTSLAHM 133
           L+++M +     +E TF S+L  C+  GLKD  +G      V KYGL+  L   T L  +
Sbjct: 390 LFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLG-LFDMMVKKYGLKARLQHYTCLVDL 448

Query: 132 YMKSGNLGEGERVIKGMPVHS-VVACNTIIAGRAQHGLSEAA 10
             +SG L E E +I+ MPV +  +   T+++    H  +E A
Sbjct: 449 LGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIA 490


>sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score =  277 bits (708), Expect = 2e-72
 Identities = 133/240 (55%), Positives = 179/240 (74%)
 Frame = -1

Query: 726 LCSKGRLKEAFETFKADIWSDPNLFSLLLQGCIQTHSFPLAKQLHSLIITSGCSSDKFVS 547
           LCSKG L+EAF+ F+ +I+++ +LF+  +Q C    S P  KQLH L++ SG SSDKF+ 
Sbjct: 23  LCSKGNLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFIC 82

Query: 546 NHLLNVYSKFGELKTAVALFDVMPRKNIMTCNILIGGYVQIGDLDSARNLFDEMTKRNNA 367
           NHL+++YSK G+  +AVA++  M +KN M+ NILI GYV+ GDL +AR +FDEM  R   
Sbjct: 83  NHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLT 142

Query: 366 TWNAMVAGLTQFEFNEEGLSLYSKMLESGFFPDEFTFGSVLRGCAGLKDLNMGRQVHGSV 187
           TWNAM+AGL QFEFNEEGLSL+ +M   GF PDE+T GSV  G AGL+ +++G+Q+HG  
Sbjct: 143 TWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYT 202

Query: 186 VKYGLELNLVVGTSLAHMYMKSGNLGEGERVIKGMPVHSVVACNTIIAGRAQHGLSEAAL 7
           +KYGLEL+LVV +SLAHMYM++G L +GE VI+ MPV ++VA NT+I G AQ+G  E  L
Sbjct: 203 IKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVL 262



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 56/228 (24%), Positives = 94/228 (41%)
 Frame = -1

Query: 687 FKADIWSDPNLFSLLLQGCIQTHSFPLAKQLHSLIITSGCSSDKFVSNHLLNVYSKFGEL 508
           F  D ++  ++FS    G     S  + +Q+H   I  G   D  V++ L ++Y + G+L
Sbjct: 172 FSPDEYTLGSVFS----GSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKL 227

Query: 507 KTAVALFDVMPRKNIMTCNILIGGYVQIGDLDSARNLFDEMTKRNNATWNAMVAGLTQFE 328
           +    +   MP +N++                                WN ++ G  Q  
Sbjct: 228 QDGEIVIRSMPVRNLVA-------------------------------WNTLIMGNAQNG 256

Query: 327 FNEEGLSLYSKMLESGFFPDEFTFGSVLRGCAGLKDLNMGRQVHGSVVKYGLELNLVVGT 148
             E  L LY  M  SG  P++ TF +VL  C+ L     G+Q+H   +K G    + V +
Sbjct: 257 CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVS 316

Query: 147 SLAHMYMKSGNLGEGERVIKGMPVHSVVACNTIIAGRAQHGLSEAALD 4
           SL  MY K G LG+  +          V  +++I+    HG  + A++
Sbjct: 317 SLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIE 364