BLASTX nr result

ID: Panax21_contig00032999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032999
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271781.2| PREDICTED: putative clathrin assembly protei...   117   2e-24
emb|CBI36596.3| unnamed protein product [Vitis vinifera]              117   2e-24
gb|ABR16117.1| unknown [Picea sitchensis]                              94   2e-17
ref|XP_002533433.1| clathrin assembly protein, putative [Ricinus...    91   2e-16
ref|XP_002982426.1| hypothetical protein SELMODRAFT_268581 [Sela...    79   8e-13

>ref|XP_002271781.2| PREDICTED: putative clathrin assembly protein At5g35200-like [Vitis
           vinifera]
          Length = 542

 Score =  117 bits (292), Expect = 2e-24
 Identities = 61/114 (53%), Positives = 85/114 (74%), Gaps = 7/114 (6%)
 Frame = +3

Query: 51  WELALVTTPSSNEAAVAETKMACGFGRLTLNRLYDNAMA-RADQNETHHVEQVTSNPFEI 227
           WELALVT PSS+ AAVAE+K+A G  +LTL+ LYD+A+A RA+QN T+H+ Q+ SNPFE+
Sbjct: 417 WELALVTAPSSSGAAVAESKLAGGMDKLTLDSLYDDAIAGRANQNRTYHMGQLGSNPFEL 476

Query: 228 ---TQDPGYVSSSIGPPTGAQMSVAEQRQEDFIVQKQ---QPVVGDDPANSFGN 371
              T+DP Y SS+I P T  +M+   Q++E  ++Q+Q   QP++G+DP N FGN
Sbjct: 477 ANSTRDPFYASSNIAPSTNVEMAGITQQEEGLMMQQQQYRQPLIGEDPTNPFGN 530


>emb|CBI36596.3| unnamed protein product [Vitis vinifera]
          Length = 510

 Score =  117 bits (292), Expect = 2e-24
 Identities = 61/114 (53%), Positives = 85/114 (74%), Gaps = 7/114 (6%)
 Frame = +3

Query: 51  WELALVTTPSSNEAAVAETKMACGFGRLTLNRLYDNAMA-RADQNETHHVEQVTSNPFEI 227
           WELALVT PSS+ AAVAE+K+A G  +LTL+ LYD+A+A RA+QN T+H+ Q+ SNPFE+
Sbjct: 385 WELALVTAPSSSGAAVAESKLAGGMDKLTLDSLYDDAIAGRANQNRTYHMGQLGSNPFEL 444

Query: 228 ---TQDPGYVSSSIGPPTGAQMSVAEQRQEDFIVQKQ---QPVVGDDPANSFGN 371
              T+DP Y SS+I P T  +M+   Q++E  ++Q+Q   QP++G+DP N FGN
Sbjct: 445 ANSTRDPFYASSNIAPSTNVEMAGITQQEEGLMMQQQQYRQPLIGEDPTNPFGN 498


>gb|ABR16117.1| unknown [Picea sitchensis]
          Length = 547

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 53/114 (46%), Positives = 72/114 (63%), Gaps = 7/114 (6%)
 Frame = +3

Query: 51  WELALVTTPSSNEAAVAETKMACGFGRLTLNRLYDNAMARADQNETHHVEQVTSNPFEIT 230
           WELALVTT SSN +  AE+K+A GF +LTL+ LY++AM R  Q  ++H  QV  NPFE +
Sbjct: 412 WELALVTTSSSNSSVQAESKLAGGFDKLTLDSLYEDAMTR--QVSSYHTGQVAPNPFEAS 469

Query: 231 ------QDPGYVSSSIGPPTGAQMSVAEQRQEDFIVQKQQPVVGDD-PANSFGN 371
                  DP Y S  + PP+  QM+   Q+Q+ F+ Q+Q  ++G   PAN FGN
Sbjct: 470 PMMQPGHDPFYASQKVAPPSAVQMASMAQQQQAFMAQQQ--MMGQQLPANPFGN 521


>ref|XP_002533433.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223526721|gb|EEF28953.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 555

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 53/111 (47%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
 Frame = +3

Query: 51  WELALVTTPSSNEAAVAETKMACGFGRLTLNRLYDNAMARADQNETHHVEQVTSNPFEI- 227
           WELALVT PSSN AAVA +K+A G  +LTL+ LYDN M    +N T+H  Q+ SNPFE  
Sbjct: 416 WELALVTAPSSNGAAVAASKLAGGMDKLTLDSLYDNVMVMETKNGTNHTGQMASNPFESF 475

Query: 228 --TQDPGYVSSSIGPPTGAQMSVAEQRQEDFIV-QKQQPVVGDDPANSFGN 371
              QD    SS+I   T  Q     Q Q   ++ Q+QQ ++G D +N FGN
Sbjct: 476 HDNQDSSPASSNIPLATNFQKVTLSQEQALLMMQQQQQTMIGVDSSNPFGN 526


>ref|XP_002982426.1| hypothetical protein SELMODRAFT_268581 [Selaginella moellendorffii]
           gi|300150018|gb|EFJ16671.1| hypothetical protein
           SELMODRAFT_268581 [Selaginella moellendorffii]
          Length = 553

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 10/116 (8%)
 Frame = +3

Query: 51  WELALVTTPSSNEAAVAETKMACGFGRLTLNRLYDNAMARADQNE-------THHVEQVT 209
           WELALVT PSSNE AV+ +++A GF +LTL+ LYD+A++R  Q +       ++      
Sbjct: 416 WELALVTNPSSNENAVSSSRLAGGFDKLTLDSLYDDALSRRPQQQYAGGAGTSYGGPPQM 475

Query: 210 SNPFE-ITQDPGYVSSSIGPPTGAQMSVAEQRQEDFIV--QKQQPVVGDDPANSFG 368
            NPF+ +  DP   S    PP   QM+   Q Q+   +  Q+QQ ++  +P N FG
Sbjct: 476 MNPFDTMNHDPFMASGKFAPPPNVQMAAMAQHQQALFLQQQQQQQMMSRNPHNPFG 531


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