BLASTX nr result

ID: Panax21_contig00032977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032977
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19420.3| unnamed protein product [Vitis vinifera]              132   3e-29
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]   132   3e-29
ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...   122   4e-26
gb|ADD09583.1| transcription initiation factor [Trifolium repens]     108   6e-22
ref|XP_003549383.1| PREDICTED: uncharacterized protein LOC100783...   107   8e-22

>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score =  132 bits (332), Expect = 3e-29
 Identities = 69/107 (64%), Positives = 82/107 (76%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2    RQKREGGIDATS-SQPGKDVSCKLVSTSVRNARDNQETDKRSQSATVSTAGAIRKFGRTQ 178
            RQKREGGIDA S SQPGKD S KL STS RNAR+NQE +KR  S  VS+ G +RKFGR  
Sbjct: 776  RQKREGGIDAASGSQPGKDASRKLSSTSGRNARENQEAEKRGYSTVVSSPGGVRKFGRNN 835

Query: 179  VSMSQMGVPRNVSIKDVIAVLEREPQTSKSTLIYRLYDKVRSDAVSD 319
              + Q  V RN+++KDVI+VLEREPQ  KSTLIYRLY+K+RS A ++
Sbjct: 836  AIVPQTRVARNITVKDVISVLEREPQMLKSTLIYRLYEKMRSGAATE 882


>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
          Length = 906

 Score =  132 bits (332), Expect = 3e-29
 Identities = 69/107 (64%), Positives = 82/107 (76%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2    RQKREGGIDATS-SQPGKDVSCKLVSTSVRNARDNQETDKRSQSATVSTAGAIRKFGRTQ 178
            RQKREGGIDA S SQPGKD S KL STS RNAR+NQE +KR  S  VS+ G +RKFGR  
Sbjct: 800  RQKREGGIDAASGSQPGKDASRKLSSTSGRNARENQEAEKRGYSTVVSSPGGVRKFGRNN 859

Query: 179  VSMSQMGVPRNVSIKDVIAVLEREPQTSKSTLIYRLYDKVRSDAVSD 319
              + Q  V RN+++KDVI+VLEREPQ  KSTLIYRLY+K+RS A ++
Sbjct: 860  AIVPQTRVARNITVKDVISVLEREPQMLKSTLIYRLYEKMRSGAATE 906


>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score =  122 bits (305), Expect = 4e-26
 Identities = 69/107 (64%), Positives = 81/107 (75%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2    RQKREGGIDATS-SQPGKDVSCKLVSTSVRNARDNQETDKRSQSATVSTAGAIRKFGRTQ 178
            RQKREGGIDA S SQPGKD S KL STS RNAR+NQE +KR  S TVS    +RKFGR  
Sbjct: 819  RQKREGGIDAASGSQPGKDASRKLSSTSGRNARENQEAEKRGYS-TVSCG--VRKFGRNN 875

Query: 179  VSMSQMGVPRNVSIKDVIAVLEREPQTSKSTLIYRLYDKVRSDAVSD 319
              + Q  V RN+++KDVI+VLEREPQ  KSTLIYRLY+K+RS A ++
Sbjct: 876  AIVPQTRVARNITVKDVISVLEREPQMLKSTLIYRLYEKMRSGAATE 922


>gb|ADD09583.1| transcription initiation factor [Trifolium repens]
          Length = 934

 Score =  108 bits (269), Expect = 6e-22
 Identities = 57/107 (53%), Positives = 79/107 (73%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2    RQKREGGID-ATSSQPGKDVSCKLVSTSVRNARDNQETDKRSQSATVSTAGAIRKFGRTQ 178
            +QKREGG D A+ SQP KDVS K   +S RN RDNQE +++  ++  ++A A RKFG+ Q
Sbjct: 829  KQKREGGTDTASGSQPTKDVSRKSSPSSGRNTRDNQERERKGPTSLGNSAAA-RKFGKNQ 887

Query: 179  VSMSQMGVPRNVSIKDVIAVLEREPQTSKSTLIYRLYDKVRSDAVSD 319
               SQ  + RN+S+KDVIAVLEREPQ SKS+L+YR++D++ SD  ++
Sbjct: 888  SPGSQTRIARNISVKDVIAVLEREPQMSKSSLLYRMHDRIHSDTSTE 934


>ref|XP_003549383.1| PREDICTED: uncharacterized protein LOC100783067 [Glycine max]
          Length = 984

 Score =  107 bits (268), Expect = 8e-22
 Identities = 56/104 (53%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2    RQKREGGIDATS-SQPGKDVSCKLVSTSVRNARDNQETDKRSQSATVSTAGAIRKFGRTQ 178
            +QKREGG+D +S SQP KDV+ K +STS R+ +DNQE +K+  S  ++++G   K GR+ 
Sbjct: 881  KQKREGGVDVSSGSQPAKDVNRKSLSTSGRSTKDNQEGEKKGSSTFIASSG--EKLGRSH 938

Query: 179  VSMSQMGVPRNVSIKDVIAVLEREPQTSKSTLIYRLYDKVRSDA 310
               SQ  V R++S+KDVIAVLEREP  SKS LI+RLY+++ SDA
Sbjct: 939  AMASQTRVARSISVKDVIAVLEREPHMSKSPLIHRLYERIHSDA 982


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