BLASTX nr result

ID: Panax21_contig00032975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032975
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...   263   3e-68
ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator c...   257   3e-66
ref|XP_002520390.1| conserved hypothetical protein [Ricinus comm...   255   1e-65
ref|XP_003598666.1| Integrator complex subunit [Medicago truncat...   248   1e-63
ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homo...   233   5e-59

>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
           gi|296081277|emb|CBI17721.3| unnamed protein product
           [Vitis vinifera]
          Length = 774

 Score =  263 bits (673), Expect = 3e-68
 Identities = 121/196 (61%), Positives = 152/196 (77%), Gaps = 6/196 (3%)
 Frame = -3

Query: 572 IFMKFACLSEGRGFHFPPCQLLNICGFQVLFDCPLDLSALAIFSPIPV------EYHDLE 411
           ++MKF CLS+G  F+FPPC ++ + GF++L DCPLDLS+L IFSPIP       E    +
Sbjct: 80  VYMKFTCLSKGGNFYFPPCHIITVSGFRILLDCPLDLSSLMIFSPIPTHAFSNPELPSPD 139

Query: 410 SVDKNRQNLEKPLDATDLIQAQPCYRTVKDLHLWNVSFIDIVLISSPMGMLGLPILTRIK 231
           SVD+ RQ  E+P+D+++LI+AQP ++TV  LHLWNV FID+VLISSPMGMLGLP L+R+ 
Sbjct: 140 SVDQKRQKHERPIDSSELIRAQPWFKTVTSLHLWNVPFIDVVLISSPMGMLGLPFLSRVN 199

Query: 230 GFSAKIYATEATARLGQLMMEDLVAMHMEFRQFYGPEESGFPQWMKWEELEKLPFALKDI 51
           GF AKIY TE TAR+GQL+MEDLV M+ EFRQFYG EESG PQWM WE+LE LP   ++I
Sbjct: 200 GFRAKIYVTEVTARIGQLLMEDLVLMNKEFRQFYGCEESGLPQWMNWEKLESLPSLFREI 259

Query: 50  ALGKDGTQLGSWMTLY 3
            LG+DG +LG WM LY
Sbjct: 260 VLGEDGVELGGWMPLY 275


>ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like
           [Glycine max]
          Length = 794

 Score =  257 bits (656), Expect = 3e-66
 Identities = 123/204 (60%), Positives = 146/204 (71%), Gaps = 16/204 (7%)
 Frame = -3

Query: 566 MKFACLSEGRGFHFPPCQLLNICGFQVLFDCPLDLSALAIFSPIPVE------------- 426
           MKF CLS+G GFHFPPC +LN CG ++L DCPLDLSAL  FSP+P               
Sbjct: 88  MKFTCLSKGGGFHFPPCHMLNFCGIRILLDCPLDLSALMAFSPVPTALDCLPVEESYNTE 147

Query: 425 ---YHDLESVDKNRQNLEKPLDATDLIQAQPCYRTVKDLHLWNVSFIDIVLISSPMGMLG 255
              + D       RQ +E  LDA  L+ A+P Y+TV +LHLWN SFID+VLISSPMG++G
Sbjct: 148 ANAFFDSRFGSGKRQKIENLLDAKSLLFAEPWYKTVNNLHLWNASFIDVVLISSPMGIMG 207

Query: 254 LPILTRIKGFSAKIYATEATARLGQLMMEDLVAMHMEFRQFYGPEESGFPQWMKWEELEK 75
           LP LTR KGFSAKIY TEA+AR+GQLMMEDLV+MH EFRQFYGP ES FP W++ EELE 
Sbjct: 208 LPFLTRTKGFSAKIYVTEASARIGQLMMEDLVSMHAEFRQFYGPGESNFPSWLRHEELEV 267

Query: 74  LPFALKDIALGKDGTQLGSWMTLY 3
           LP  L+++ LGKDG +LG WM LY
Sbjct: 268 LPSELRELILGKDGVELGGWMPLY 291


>ref|XP_002520390.1| conserved hypothetical protein [Ricinus communis]
           gi|223540437|gb|EEF42006.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 705

 Score =  255 bits (651), Expect = 1e-65
 Identities = 125/204 (61%), Positives = 155/204 (75%), Gaps = 16/204 (7%)
 Frame = -3

Query: 566 MKFACLSEGRGFHFPPCQLLNICGFQVLFDCPLDLSALAIFSPIPVEY------------ 423
           MKF CLS+G GFHFPPC +L++ G+++LFDCPLDLS+L IFSP+P ++            
Sbjct: 1   MKFTCLSKGNGFHFPPCCILDMSGYRILFDCPLDLSSLTIFSPVPADFCPILPEEHPNCS 60

Query: 422 -HD---LESVDKNRQNLEKPLDATDLIQAQPCYRTVKDLHLWNVSFIDIVLISSPMGMLG 255
            HD   +E        +EKPLD  +LI A+P Y+T K+LHLW+ S IDIVLISS MGMLG
Sbjct: 61  LHDSLRVELETGKMWGMEKPLDVQNLIYAEPWYKTAKNLHLWDPSSIDIVLISSTMGMLG 120

Query: 254 LPILTRIKGFSAKIYATEATARLGQLMMEDLVAMHMEFRQFYGPEESGFPQWMKWEELEK 75
           LP LT+ KGFSAKIYATEATAR+GQL+MEDLV+MH+EFRQFYG EES  PQWM+WEELE 
Sbjct: 121 LPFLTQCKGFSAKIYATEATARVGQLIMEDLVSMHVEFRQFYGSEESD-PQWMRWEELEL 179

Query: 74  LPFALKDIALGKDGTQLGSWMTLY 3
           LP  L+++ LGKDG++LG+W  LY
Sbjct: 180 LPSELREVTLGKDGSELGAWFPLY 203


>ref|XP_003598666.1| Integrator complex subunit [Medicago truncatula]
           gi|355487714|gb|AES68917.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 268

 Score =  248 bits (633), Expect = 1e-63
 Identities = 118/188 (62%), Positives = 142/188 (75%)
 Frame = -3

Query: 566 MKFACLSEGRGFHFPPCQLLNICGFQVLFDCPLDLSALAIFSPIPVEYHDLESVDKNRQN 387
           MK  CLS+GRGFHFPPC +LN CG ++LFDCPLDLS+L                ++ RQ 
Sbjct: 94  MKLTCLSKGRGFHFPPCHMLNFCGVRILFDCPLDLSSLMN--------------NEKRQK 139

Query: 386 LEKPLDATDLIQAQPCYRTVKDLHLWNVSFIDIVLISSPMGMLGLPILTRIKGFSAKIYA 207
           +E  LDA +L+ A+P Y+TV  LHLWN S ID++LISSPMG++GLP LTR KGFSAKIY 
Sbjct: 140 IEDLLDAKNLVFAEPWYKTVNKLHLWNASLIDVILISSPMGIMGLPYLTRQKGFSAKIYV 199

Query: 206 TEATARLGQLMMEDLVAMHMEFRQFYGPEESGFPQWMKWEELEKLPFALKDIALGKDGTQ 27
           TEA+AR+GQLMMEDLV+MH EFRQFYGPEES FP W++ EELE LP  LK+I +GKDG +
Sbjct: 200 TEASARIGQLMMEDLVSMHAEFRQFYGPEESNFPPWLRQEELEILPSVLKEILVGKDGVE 259

Query: 26  LGSWMTLY 3
           LG WM LY
Sbjct: 260 LGGWMPLY 267


>ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homolog [Cucumis sativus]
          Length = 693

 Score =  233 bits (594), Expect = 5e-59
 Identities = 110/201 (54%), Positives = 141/201 (70%), Gaps = 13/201 (6%)
 Frame = -3

Query: 566 MKFACLSEGRGFHFPPCQLLNICGFQVLFDCPLDLSALAIFSPIPVEY------------ 423
           M+F CLS+G  F+ PPC +LN+CGF++ FDCP+D SAL+IFSP+P +             
Sbjct: 1   MEFTCLSKGGCFYMPPCHMLNVCGFRIQFDCPVDFSALSIFSPVPSDLDVLSDKEPSSHL 60

Query: 422 -HDLESVDKNRQNLEKPLDATDLIQAQPCYRTVKDLHLWNVSFIDIVLISSPMGMLGLPI 246
            H    +D      EKPLD   LI+A+PCY+ +K+L LWN SF +IVLISSPMGMLGLP 
Sbjct: 61  GHGSLDLDNVSDETEKPLDVGYLIKAEPCYKIIKNLCLWNPSFTNIVLISSPMGMLGLPF 120

Query: 245 LTRIKGFSAKIYATEATARLGQLMMEDLVAMHMEFRQFYGPEESGFPQWMKWEELEKLPF 66
           LTR KGFSAKIY TEATARLG++MM+DL+AMHMEF+QFYG E+    QWM+ E+L  L  
Sbjct: 121 LTREKGFSAKIYVTEATARLGKIMMDDLIAMHMEFKQFYGSEDDAISQWMRQEDLSLLHH 180

Query: 65  ALKDIALGKDGTQLGSWMTLY 3
            L+++A G+D    G WM +Y
Sbjct: 181 KLREVAFGQDRADFGGWMPMY 201


Top