BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032974
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
ref|XP_002528578.1| pentatricopeptide repeat-containing protein,...   103   1e-20
ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arab...    94   2e-17
ref|NP_196771.1| pentatricopeptide repeat-containing protein [Ar...    84   1e-14
ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13

>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  130 bits (326), Expect = 1e-28
 Identities = 64/139 (46%), Positives = 102/139 (73%), Gaps = 16/139 (11%)
 Frame = +1

Query: 1   VPICKLFCS-----------DSASSKL-----DQDRHEQVRKLEKLIQQYHTEPAKNLLK 132
           +P CK FCS           +++++ L     +Q RHE V+KL+ L+QQ  TE A+ L++
Sbjct: 25  LPSCKPFCSLTEKQEPTSTTNNSTTNLQGQVQEQARHEHVQKLQTLLQQGRTETARRLIR 84

Query: 133 SLIVSKSPFDSPSDLYSLFSISSPSTKPILSNLLLSVCAEAKLVNEAAELYMLIRKDGIF 312
           S+++ KSPF SPS LY+LFS+SS   KP+ S++LLS+C+E+K+V+E+AELYML++KDG+ 
Sbjct: 85  SMLLPKSPFSSPSHLYTLFSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVL 144

Query: 313 PSLRVIHVILQSLVSSRQY 369
           PS+  +++ L+SLVS+++Y
Sbjct: 145 PSVASLNLFLESLVSTKRY 163


>ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531974|gb|EEF33786.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 817

 Score =  103 bits (257), Expect = 1e-20
 Identities = 55/115 (47%), Positives = 79/115 (68%)
 Frame = +1

Query: 31  SASSKLDQDRHEQVRKLEKLIQQYHTEPAKNLLKSLIVSKSPFDSPSDLYSLFSISSPST 210
           S +S  DQ+R+EQV KL+ L+QQ   E A +L KSLI++KS F SPSDL+S FS  S   
Sbjct: 45  SNNSSKDQERYEQVNKLQILLQQNCNEAAYSLAKSLILTKSTFSSPSDLFSCFSACSIPL 104

Query: 211 KPILSNLLLSVCAEAKLVNEAAELYMLIRKDGIFPSLRVIHVILQSLVSSRQYNK 375
           +  LS++LLSVC ++K++ EA ELY  +R+DG  PSL  + ++   LV+ +Q+ K
Sbjct: 105 RITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVK 159


>ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata] gi|297317348|gb|EFH47770.1| hypothetical protein
           ARALYDRAFT_350399 [Arabidopsis lyrata subsp. lyrata]
          Length = 1202

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/109 (46%), Positives = 76/109 (69%), Gaps = 2/109 (1%)
 Frame = +1

Query: 49  DQDRHEQVRKLEKLIQQYHTEPAKNLLKSLIVSKS-PFDSPSDLYSLFSISSPSTKPILS 225
           D++RHE++R L  L+QQ   E A+ +L SL+ S S PF SP +L+S FS+SSPS K   S
Sbjct: 425 DEERHEKLRNLRVLLQQNRIETARGVLYSLLRSDSAPFTSPKELFSAFSLSSPSLKHDFS 484

Query: 226 NLLLSVCA-EAKLVNEAAELYMLIRKDGIFPSLRVIHVILQSLVSSRQY 369
            LLLSV   E+K+++EAA+L+  +R +GIFPS   + ++L  LV ++Q+
Sbjct: 485 YLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQF 533


>ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
           gi|9759377|dbj|BAB10028.1| unnamed protein product
           [Arabidopsis thaliana] gi|28973713|gb|AAO64173.1|
           unknown protein [Arabidopsis thaliana]
           gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis
           thaliana] gi|110737169|dbj|BAF00534.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332004380|gb|AED91763.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 47/104 (45%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
 Frame = +1

Query: 64  EQVRKLEKLIQQYHTEPAKNLLKSLIVSKS-PFDSPSDLYSLFSISSPSTKPILSNLLLS 240
           E++R L  L+QQ   E A+ +L SL+ S S PF SP +L+S FS+SSPS K   S LLLS
Sbjct: 57  EKLRNLRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLS 116

Query: 241 VCA-EAKLVNEAAELYMLIRKDGIFPSLRVIHVILQSLVSSRQY 369
           V   E+K+++EAA+L+  +R +GI+PS   + ++L  LV ++Q+
Sbjct: 117 VLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQF 160


>ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 4/123 (3%)
 Frame = +1

Query: 19  FCSDSA----SSKLDQDRHEQVRKLEKLIQQYHTEPAKNLLKSLIVSKSPFDSPSDLYSL 186
           FCS S     S    Q R ++V+KLE LI +  T  A+  L+SL+++K+ F S S+L++ 
Sbjct: 24  FCSQSLTLCESDPQYQKRLQKVQKLETLISRGRTITARRFLRSLLLTKTAFSSLSELHAH 83

Query: 187 FSISSPSTKPILSNLLLSVCAEAKLVNEAAELYMLIRKDGIFPSLRVIHVILQSLVSSRQ 366
            S      KP  S+ LL +C+ +K+++EA +LY  +RKDG  PS R ++ +L++LV SR 
Sbjct: 84  VS------KPFFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRH 137

Query: 367 YNK 375
           + K
Sbjct: 138 FEK 140