BLASTX nr result

ID: Panax21_contig00032968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032968
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro...   366   6e-99
ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...   362   1e-97
ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|2...   353   5e-95
ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial pro...   331   2e-88
ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   331   2e-88

>ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 689

 Score =  366 bits (939), Expect = 6e-99
 Identities = 184/281 (65%), Positives = 221/281 (78%), Gaps = 2/281 (0%)
 Frame = -1

Query: 838 DPYSLLKEDPIQILSDLWVRSFSHHHQTQNPPKPFTNLTGFLSKLDLWVLAYQRTCAHVT 659
           DPYSL+KEDPIQ+ S LWVRSFS+         PF+NLTGFLSK DLWVLAYQR+CAH T
Sbjct: 39  DPYSLMKEDPIQVCSSLWVRSFSNQTHA-----PFSNLTGFLSKFDLWVLAYQRSCAHFT 93

Query: 658 GSFPPRNAIHFHVLTDLLSLRNAVLHNQFQWNKKTQQYIHSPNEKPITKILSKRKLQAIL 479
           GSFPPRNAIH  VL DLLSL+NAV+  +F WN K   YI SPNEKP+T+  SKRK+Q+IL
Sbjct: 94  GSFPPRNAIHSQVLRDLLSLQNAVVRGRFSWNHKIHSYIRSPNEKPLTEFTSKRKIQSIL 153

Query: 478 NSSTPPFQDRVVQEVILMILEPIFEPRFSAKSHAFRPGRSAHSVIRTIRSNFSGYLWFLK 299
            S+ P FQDRVVQEV+L+ILEPIFE RFS+KSHAFRPGR+AH+VIRTIRSNF+GYLWFL+
Sbjct: 154 ESNAPCFQDRVVQEVLLLILEPIFEARFSSKSHAFRPGRNAHTVIRTIRSNFAGYLWFLR 213

Query: 298 GDITQVFDDVDANVLMGFVENVVKDKKVLGFIKSAL--RVRNRLQCDDDGNGEYGRQXXX 125
           GD++++F+ VD +V+MG++E  VKDKKVLG IK AL  RVRN+     D +  +G++   
Sbjct: 214 GDVSEIFETVDTDVVMGYLEKYVKDKKVLGLIKLALGARVRNQAH-GGDCDVTFGKK--- 269

Query: 124 XXXXXXXXXXKILNENEPKPDPYWLRTFFDFAPEEAAKVPN 2
                     KILNENEPKPDP+WLR+FF FAPEEAAKVP+
Sbjct: 270 -KKKKGPKKKKILNENEPKPDPFWLRSFFSFAPEEAAKVPS 309


>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
           gi|223541113|gb|EEF42669.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 681

 Score =  362 bits (928), Expect = 1e-97
 Identities = 192/329 (58%), Positives = 232/329 (70%), Gaps = 5/329 (1%)
 Frame = -1

Query: 973 MSLRTNIKHLAHVSS----IRYFSVLPAXXXXXXXXXXXXXXXXXXXXQDPYSLLKEDPI 806
           MS+RT IKHL   SS    +R FS LP                      DPYSLLK+DPI
Sbjct: 1   MSVRTLIKHLPSTSSFYKSLRSFSSLPIHQ-------------------DPYSLLKQDPI 41

Query: 805 QILSDLWVRSFSHHHQTQNPPKP-FTNLTGFLSKLDLWVLAYQRTCAHVTGSFPPRNAIH 629
           +I + LWV+SFS      +PP   F NLTGFLSKLDLWVLAYQR+CA VTG+FPPRNA+H
Sbjct: 42  EICTSLWVKSFS------SPPNTTFPNLTGFLSKLDLWVLAYQRSCAQVTGTFPPRNALH 95

Query: 628 FHVLTDLLSLRNAVLHNQFQWNKKTQQYIHSPNEKPITKILSKRKLQAILNSSTPPFQDR 449
              L  LLSL+NAV+HN+F+WN KT+Q I SPN+KP TK++SK KL+A++NS+ P FQDR
Sbjct: 96  SQTLHSLLSLQNAVVHNRFKWNDKTRQIIRSPNDKPFTKLVSKTKLKAMVNSNDPCFQDR 155

Query: 448 VVQEVILMILEPIFEPRFSAKSHAFRPGRSAHSVIRTIRSNFSGYLWFLKGDITQVFDDV 269
           VVQEV+LM+LEP FE RFS KSHAFRPGR+AH+VIRTIRSNF+GYLWFL+GD++++F  V
Sbjct: 156 VVQEVLLMVLEPFFEARFSGKSHAFRPGRNAHTVIRTIRSNFAGYLWFLRGDLSEIFYAV 215

Query: 268 DANVLMGFVENVVKDKKVLGFIKSALRVRNRLQCDDDGNGEYGRQXXXXXXXXXXXXXKI 89
           DAN ++  VE VVKDKKVL  +K AL+   R Q   +      R+             +I
Sbjct: 216 DANFVLECVEKVVKDKKVLNLVKDALKSPMRNQ---ELEKRSDRKELRKKKKKKATKKRI 272

Query: 88  LNENEPKPDPYWLRTFFDFAPEEAAKVPN 2
           LNENEPKPDPYWLRTFFDFAPEEA  +PN
Sbjct: 273 LNENEPKPDPYWLRTFFDFAPEEAVNIPN 301


>ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|222848302|gb|EEE85849.1|
           predicted protein [Populus trichocarpa]
          Length = 623

 Score =  353 bits (905), Expect = 5e-95
 Identities = 174/278 (62%), Positives = 212/278 (76%)
 Frame = -1

Query: 838 DPYSLLKEDPIQILSDLWVRSFSHHHQTQNPPKPFTNLTGFLSKLDLWVLAYQRTCAHVT 659
           DPYS+LKEDP+ I + +WV+SFS           F+NLTGFLSKLDLW LAYQR+CAHVT
Sbjct: 1   DPYSVLKEDPVDICTSIWVKSFSSPSNFT-----FSNLTGFLSKLDLWALAYQRSCAHVT 55

Query: 658 GSFPPRNAIHFHVLTDLLSLRNAVLHNQFQWNKKTQQYIHSPNEKPITKILSKRKLQAIL 479
           G FPPRNA+  H L  L SL+ AV+HN+F+WN K  Q + SPN+KP TK++SKRKL A++
Sbjct: 56  GKFPPRNALPSHALHSLFSLQTAVVHNRFKWNDKAHQILRSPNDKPSTKLVSKRKLSAMM 115

Query: 478 NSSTPPFQDRVVQEVILMILEPIFEPRFSAKSHAFRPGRSAHSVIRTIRSNFSGYLWFLK 299
            S  P FQDRVVQE++LM+LEPIFE RFS KSHAFRPGR+AH+VIRTIRSNF+GYLWFL+
Sbjct: 116 ESDDPCFQDRVVQEMLLMVLEPIFEARFSRKSHAFRPGRNAHTVIRTIRSNFAGYLWFLR 175

Query: 298 GDITQVFDDVDANVLMGFVENVVKDKKVLGFIKSALRVRNRLQCDDDGNGEYGRQXXXXX 119
           GD++++ DD+DA+V+MG VE VV+DKKVL  IK AL+   R++      G YG +     
Sbjct: 176 GDLSEILDDIDADVVMGCVEKVVRDKKVLNLIKKALKSPVRIR----EMGNYGEE-SRKK 230

Query: 118 XXXXXXXXKILNENEPKPDPYWLRTFFDFAPEEAAKVP 5
                   KILNENEPKPDPYWLRTFFDFAPEEAAK+P
Sbjct: 231 KKRKSTKKKILNENEPKPDPYWLRTFFDFAPEEAAKIP 268


>ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Cucumis sativus]
          Length = 697

 Score =  331 bits (849), Expect = 2e-88
 Identities = 166/279 (59%), Positives = 206/279 (73%)
 Frame = -1

Query: 838 DPYSLLKEDPIQILSDLWVRSFSHHHQTQNPPKPFTNLTGFLSKLDLWVLAYQRTCAHVT 659
           DPYS LKEDPI I S +W+++F+       P   F++L+ FLSK DLWVLAYQR+CA +T
Sbjct: 55  DPYSHLKEDPIDICSSIWLKAFA-----SLPNSSFSHLSSFLSKFDLWVLAYQRSCADLT 109

Query: 658 GSFPPRNAIHFHVLTDLLSLRNAVLHNQFQWNKKTQQYIHSPNEKPITKILSKRKLQAIL 479
           G+FPPRNAIH HVL DLLSLRNAV++ +F WN+K  Q I  PN+K  T ++SKRKL+A+L
Sbjct: 110 GNFPPRNAIHSHVLRDLLSLRNAVINGKFSWNRKANQLIRCPNDKSRTHLISKRKLRAML 169

Query: 478 NSSTPPFQDRVVQEVILMILEPIFEPRFSAKSHAFRPGRSAHSVIRTIRSNFSGYLWFLK 299
            S  P FQDRVVQEV+L +LEP FE RFS KSHAFRPGR+AHS IR IRSNF+GYLWFLK
Sbjct: 170 ESDEPCFQDRVVQEVLLNVLEPFFEARFSLKSHAFRPGRNAHSFIRAIRSNFAGYLWFLK 229

Query: 298 GDITQVFDDVDANVLMGFVENVVKDKKVLGFIKSALRVRNRLQCDDDGNGEYGRQXXXXX 119
            D+++V   +D NV+MG +E  VKDKK+L  +KSAL+   + +   + N E  ++     
Sbjct: 230 ADLSEVLSHIDENVVMGSLEKAVKDKKILRLVKSALQSPRKTRPRVEDNEEMMKK---KK 286

Query: 118 XXXXXXXXKILNENEPKPDPYWLRTFFDFAPEEAAKVPN 2
                   KILNENEPKPDPYWLRTFF+FAPEEAAKVP+
Sbjct: 287 NKGAMKKKKILNENEPKPDPYWLRTFFNFAPEEAAKVPS 325


>ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 697

 Score =  331 bits (848), Expect = 2e-88
 Identities = 166/279 (59%), Positives = 206/279 (73%)
 Frame = -1

Query: 838 DPYSLLKEDPIQILSDLWVRSFSHHHQTQNPPKPFTNLTGFLSKLDLWVLAYQRTCAHVT 659
           DPYS LKEDPI I S +W+++F+       P   F++L+ FLSK DLWVLAYQR+CA +T
Sbjct: 55  DPYSHLKEDPIDICSSIWLKAFA-----SLPNSSFSHLSSFLSKFDLWVLAYQRSCADLT 109

Query: 658 GSFPPRNAIHFHVLTDLLSLRNAVLHNQFQWNKKTQQYIHSPNEKPITKILSKRKLQAIL 479
           G+FPPRNAIH HVL DLLSLRNAV++ +F WN+K  Q I  PN+K  T ++SKRKL+A+L
Sbjct: 110 GNFPPRNAIHSHVLRDLLSLRNAVINGKFSWNRKANQLIRCPNDKSRTHLISKRKLRAML 169

Query: 478 NSSTPPFQDRVVQEVILMILEPIFEPRFSAKSHAFRPGRSAHSVIRTIRSNFSGYLWFLK 299
            S  P FQDRVVQEV+L +LEP FE RFS KSHAFRPGR+AHS IR IRSNF+GYLWFLK
Sbjct: 170 ESDEPCFQDRVVQEVLLNVLEPXFEARFSLKSHAFRPGRNAHSFIRAIRSNFAGYLWFLK 229

Query: 298 GDITQVFDDVDANVLMGFVENVVKDKKVLGFIKSALRVRNRLQCDDDGNGEYGRQXXXXX 119
            D+++V   +D NV+MG +E  VKDKK+L  +KSAL+   + +   + N E  ++     
Sbjct: 230 ADLSEVLSHIDENVVMGSLEKAVKDKKILRLVKSALQSPRKTRPRVEDNEEMMKK---KK 286

Query: 118 XXXXXXXXKILNENEPKPDPYWLRTFFDFAPEEAAKVPN 2
                   KILNENEPKPDPYWLRTFF+FAPEEAAKVP+
Sbjct: 287 NKGAMKKKKILNENEPKPDPYWLRTFFNFAPEEAAKVPS 325


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