BLASTX nr result
ID: Panax21_contig00032967
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00032967 (506 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002326066.1| predicted protein [Populus trichocarpa] gi|2... 85 8e-17 ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [... 87 1e-16 ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putativ... 83 4e-16 ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|2... 79 2e-14 gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum] 65 2e-11 >ref|XP_002326066.1| predicted protein [Populus trichocarpa] gi|222862941|gb|EEF00448.1| predicted protein [Populus trichocarpa] Length = 530 Score = 85.1 bits (209), Expect(2) = 8e-17 Identities = 46/83 (55%), Positives = 55/83 (66%) Frame = -2 Query: 307 FLVAQIRKAISDVQSGNTVAFATGKVXXXXXXXXXXXXXXXXXALSKQPSMGQMSINVED 128 FLVAQI+KAI+DV+SGNTVAFATGK ALSK MG IN+ED Sbjct: 450 FLVAQIKKAIADVESGNTVAFATGKAARRKEREAAASQKEARNALSKV--MGSTCINIED 507 Query: 127 KYKYMIAPTMAKKEGSADDAWDD 59 KY++MIAP++ EG+AD AWDD Sbjct: 508 KYRFMIAPSVITSEGAADSAWDD 530 Score = 26.6 bits (57), Expect(2) = 8e-17 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -1 Query: 506 DYVHRIXXXXXXXXXXXXXSFYTDRDM 426 DYVHRI SFYTDRD+ Sbjct: 423 DYVHRIGRTGRAGSTGQATSFYTDRDL 449 >ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [Vitis vinifera] gi|297745752|emb|CBI15808.3| unnamed protein product [Vitis vinifera] Length = 568 Score = 86.7 bits (213), Expect(2) = 1e-16 Identities = 45/83 (54%), Positives = 55/83 (66%) Frame = -2 Query: 307 FLVAQIRKAISDVQSGNTVAFATGKVXXXXXXXXXXXXXXXXXALSKQPSMGQMSINVED 128 FLVA IRKAI+DV SGNTVAFATGKV ALS MG S+N+E+ Sbjct: 486 FLVAHIRKAIADVGSGNTVAFATGKVARKKEREAAAAQKEARIALSNLSLMGPTSLNIEE 545 Query: 127 KYKYMIAPTMAKKEGSADDAWDD 59 KY++M++P+ K EG+ADDAWDD Sbjct: 546 KYRFMMSPSSIKTEGAADDAWDD 568 Score = 24.3 bits (51), Expect(2) = 1e-16 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -1 Query: 506 DYVHRIXXXXXXXXXXXXXSFYTDRDM 426 +YVHRI SFYTDRD+ Sbjct: 459 NYVHRIGRTGRAGSTGQATSFYTDRDV 485 >ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223536802|gb|EEF38442.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 564 Score = 83.2 bits (204), Expect(2) = 4e-16 Identities = 46/83 (55%), Positives = 54/83 (65%) Frame = -2 Query: 307 FLVAQIRKAISDVQSGNTVAFATGKVXXXXXXXXXXXXXXXXXALSKQPSMGQMSINVED 128 FLVAQI+KAI+DV+SGNTVAFATGKV LSK +G SIN+ED Sbjct: 484 FLVAQIKKAIADVKSGNTVAFATGKVARRKEREAAASQKEARNDLSK--LLGPTSINIED 541 Query: 127 KYKYMIAPTMAKKEGSADDAWDD 59 KY++MIA + K EG AD AWDD Sbjct: 542 KYRFMIASSNTKGEGVADSAWDD 564 Score = 26.2 bits (56), Expect(2) = 4e-16 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -1 Query: 506 DYVHRIXXXXXXXXXXXXXSFYTDRDM 426 DYVHR+ SFYTDRD+ Sbjct: 457 DYVHRVGRTGRAGSAGQATSFYTDRDL 483 >ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|222857806|gb|EEE95353.1| predicted protein [Populus trichocarpa] Length = 559 Score = 78.6 bits (192), Expect(2) = 2e-14 Identities = 43/85 (50%), Positives = 53/85 (62%), Gaps = 2/85 (2%) Frame = -2 Query: 307 FLVAQIRKAISDVQSGNTVAFATGKVXXXXXXXXXXXXXXXXXALSKQPSM--GQMSINV 134 FLVAQI+KAI+DV+SGNTVAFATGK PS G IN+ Sbjct: 478 FLVAQIKKAIADVESGNTVAFATGKTARRKEREAAAALHKEAR---NDPSKVTGPACINI 534 Query: 133 EDKYKYMIAPTMAKKEGSADDAWDD 59 EDKY++M+AP++ K EG+AD AWDD Sbjct: 535 EDKYRFMMAPSIIKSEGAADSAWDD 559 Score = 25.0 bits (53), Expect(2) = 2e-14 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -1 Query: 506 DYVHRIXXXXXXXXXXXXXSFYTDRDM 426 DYVHRI SFYTD+D+ Sbjct: 451 DYVHRIGRTGRAGSTGQATSFYTDQDL 477 >gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum] Length = 622 Score = 65.1 bits (157), Expect(2) = 2e-11 Identities = 35/76 (46%), Positives = 46/76 (60%) Frame = -2 Query: 307 FLVAQIRKAISDVQSGNTVAFATGKVXXXXXXXXXXXXXXXXXALSKQPSMGQMSINVED 128 FLV IRKAI+D +SGN VAFATGKV A S+ +G SIN+ED Sbjct: 481 FLVTNIRKAIADAESGNAVAFATGKVARRKEKEAAAAHKEANIASSRHLGLGAASINIED 540 Query: 127 KYKYMIAPTMAKKEGS 80 KY++MIA + ++ EG+ Sbjct: 541 KYRFMIAASNSRGEGA 556 Score = 28.5 bits (62), Expect(2) = 2e-11 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = -1 Query: 506 DYVHRIXXXXXXXXXXXXXSFYTDRDMVFYT 414 DY+HRI SFYTDRDM T Sbjct: 454 DYIHRIGRTGRAGSTGIATSFYTDRDMFLVT 484