BLASTX nr result

ID: Panax21_contig00032956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032956
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539589.1| PREDICTED: WD repeat-containing protein 44-l...   166   2e-39
ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-l...   163   2e-38
ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-l...   160   2e-37
ref|XP_002534244.1| WD-repeat protein, putative [Ricinus communi...   154   1e-35
ref|XP_002317512.1| predicted protein [Populus trichocarpa] gi|2...   151   9e-35

>ref|XP_003539589.1| PREDICTED: WD repeat-containing protein 44-like [Glycine max]
          Length = 766

 Score =  166 bits (421), Expect = 2e-39
 Identities = 92/154 (59%), Positives = 103/154 (66%), Gaps = 24/154 (15%)
 Frame = +2

Query: 17   VLITRSYEHFHCQDVSAAIPWLGMGDKWGLDDTCSGELHEF---ADEVSAANYPSTPVQE 187
            V +TRSYEHFHC+DVS AIPW GMGD+W + DT SGE  E    ADEVS+AN+P TPV+E
Sbjct: 613  VTVTRSYEHFHCKDVSVAIPWPGMGDEWDMQDTFSGEQPEIDNHADEVSSANHPPTPVEE 672

Query: 188  TLGKESLPLASG----------GCATNSYFFDRISATWPEEKLLSDTKGR----SLDF-- 319
                E    ASG            ATNSYFFDRISATWPEEKLL  T+ +    S+DF  
Sbjct: 673  NFVTEGSRSASGYSNSPRHATIASATNSYFFDRISATWPEEKLLLATRTQSPRVSMDFSN 732

Query: 320  -----CSAWGMVIVTPGFRGEIRTFQNFGFPVRI 406
                  SAWGMVIVT G RGEIRTFQNFG P+RI
Sbjct: 733  GVSKKMSAWGMVIVTAGLRGEIRTFQNFGLPLRI 766


>ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-like [Cucumis sativus]
            gi|449498657|ref|XP_004160597.1| PREDICTED: WD
            repeat-containing protein 44-like [Cucumis sativus]
          Length = 918

 Score =  163 bits (413), Expect = 2e-38
 Identities = 88/155 (56%), Positives = 101/155 (65%), Gaps = 25/155 (16%)
 Frame = +2

Query: 17   VLITRSYEHFHCQDVSAAIPWLGMGDKWGLDDTCSGE---LHEFADEVSAANYPSTPVQE 187
            V + RSYEHFHCQDVS AIPW GMGD WGL+D   G+   +    DEVS+AN+P +PV+ 
Sbjct: 764  VTVVRSYEHFHCQDVSVAIPWPGMGDTWGLNDDYCGDDNVIENHIDEVSSANHPPSPVEA 823

Query: 188  TLGKESLPLASG----------GCATNSYFFDRISATWPEEKLLSDTKGR-----SLDFC 322
              G E   LASG            ATNSYFFDRISATWPEEKL+ +T+       S+D  
Sbjct: 824  ENGSEDSVLASGCTNSPLHGTLSSATNSYFFDRISATWPEEKLILNTRNNRSPHSSMDIA 883

Query: 323  -------SAWGMVIVTPGFRGEIRTFQNFGFPVRI 406
                   SAWGMVIVT G RGEIRTFQNFGFPV+I
Sbjct: 884  SGMFQGSSAWGMVIVTAGLRGEIRTFQNFGFPVKI 918


>ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 880

 Score =  160 bits (404), Expect = 2e-37
 Identities = 90/149 (60%), Positives = 96/149 (64%), Gaps = 19/149 (12%)
 Frame = +2

Query: 17   VLITRSYEHFHCQDVSAAIPWLGMGDKWGLDDTCSGE---LHEFADEVSAANYPSTPVQE 187
            + +TRSYEHFH QDVS AIPW GMGD W L D+ SGE   L    DEVS AN+P TPV+ 
Sbjct: 732  IAVTRSYEHFHSQDVSVAIPWPGMGDTWELQDSFSGEQIGLGSHLDEVSTANHPPTPVEY 791

Query: 188  TLGKESLPLASG----------GCATNSYFFDRISATWPEEKLLSDTKG----RSLDFC- 322
              G E  P  S             ATN YFFDRISATWPEEKLL  TK      S+DF  
Sbjct: 792  INGDEGSPSVSVCTSSPLNGTISSATNGYFFDRISATWPEEKLLLATKNTSPHASVDFAN 851

Query: 323  -SAWGMVIVTPGFRGEIRTFQNFGFPVRI 406
             SAWGMVIVT G RGEIRTFQNFG PVRI
Sbjct: 852  GSAWGMVIVTAGLRGEIRTFQNFGLPVRI 880


>ref|XP_002534244.1| WD-repeat protein, putative [Ricinus communis]
            gi|223525645|gb|EEF28134.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 944

 Score =  154 bits (389), Expect = 1e-35
 Identities = 93/154 (60%), Positives = 99/154 (64%), Gaps = 24/154 (15%)
 Frame = +2

Query: 17   VLITRSYEHFHCQDVSAAIPWLGMGDKWGLDDTCSGE---LHEFADEVSAANYPSTPVQE 187
            V ITRSYEHFHCQDVS AIPW GMGD WGL DT  GE   L    DEVS AN+P TPV+E
Sbjct: 791  VTITRSYEHFHCQDVSVAIPWPGMGDIWGLQDTLPGEQNGLDNHLDEVSIANHPPTPVEE 850

Query: 188  ---TLGKESL------PLASGGC-ATNSYFFDRISATWPEEKLLSDTK----GRSLDFC- 322
                 G +SL      PL    C ATN YFFDRISATWPEEKL   T+      S+D   
Sbjct: 851  ISSNNGSQSLSGCTNSPLNGIICSATNGYFFDRISATWPEEKLNLATRTWSPRSSVDIAS 910

Query: 323  ------SAWGMVIVTPGFRGEIRTFQNFGFPVRI 406
                  SA+GMVIVT G RGEIRTFQNFG PVRI
Sbjct: 911  GMSQNMSAYGMVIVTAGLRGEIRTFQNFGLPVRI 944


>ref|XP_002317512.1| predicted protein [Populus trichocarpa] gi|222860577|gb|EEE98124.1|
            predicted protein [Populus trichocarpa]
          Length = 882

 Score =  151 bits (381), Expect = 9e-35
 Identities = 90/155 (58%), Positives = 96/155 (61%), Gaps = 25/155 (16%)
 Frame = +2

Query: 17   VLITRSYEHFHCQDVSAAIPWLGMGDKWGLDDTCSGE---LHEFADEVSAANYPSTPVQE 187
            V ITRSYEHF CQDVS AIPW GM D WGL DT SGE   L    DEVS  N+P TPV+E
Sbjct: 730  VTITRSYEHFLCQDVSVAIPWPGMADTWGLQDTLSGEQNGLDNHLDEVSIVNHPPTPVEE 789

Query: 188  TLGKESLPLASGGC-----------ATNSYFFDRISATWPEEKLLSDTKGR----SLDF- 319
               + S  L   GC           ATN YFFDRISATWPEEKL   T+ R    S+D  
Sbjct: 790  ASNEGSQSLT--GCTNSPMNGIISSATNGYFFDRISATWPEEKLDLATRTRSHHASVDIS 847

Query: 320  ------CSAWGMVIVTPGFRGEIRTFQNFGFPVRI 406
                   SA+GMVIVT G RGEIRTFQNFG PVRI
Sbjct: 848  NGLSQNVSAYGMVIVTAGLRGEIRTFQNFGLPVRI 882


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