BLASTX nr result

ID: Panax21_contig00032923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032923
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199153.1| uncharacterized protein [Arabidopsis thaliana] ...   101   6e-20
ref|XP_002863659.1| hypothetical protein ARALYDRAFT_494659 [Arab...   100   9e-20
ref|NP_199152.1| uncharacterized protein [Arabidopsis thaliana] ...   100   2e-19
ref|XP_002863658.1| hypothetical protein ARALYDRAFT_917317 [Arab...   100   2e-19
ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18

>ref|NP_199153.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8843893|dbj|BAA97419.1| unnamed protein product
           [Arabidopsis thaliana] gi|18450363|gb|AAK82505.2|
           AT5g43400/MWF20_9 [Arabidopsis thaliana]
           gi|25090369|gb|AAN72286.1| At5g43400/MWF20_9
           [Arabidopsis thaliana] gi|332007573|gb|AED94956.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 655

 Score =  101 bits (252), Expect = 6e-20
 Identities = 44/61 (72%), Positives = 51/61 (83%)
 Frame = -3

Query: 227 YVVPDTPPSDLAERLQSSWAHDPLTTLQLICNLRGVRATEKSDKESFYTAVHWLHKNHPR 48
           ++VPDT P DL +RL  SW+HDPLTTL+LICNLRGVR T KSDKE FYTA  WL+KNHP+
Sbjct: 75  HIVPDTSPDDLIQRLAISWSHDPLTTLKLICNLRGVRGTGKSDKEGFYTAAFWLYKNHPK 134

Query: 47  T 45
           T
Sbjct: 135 T 135



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/110 (38%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
 Frame = -2

Query: 306 PPMGFTENLSATYLSSGNPFLDFFFHV---RSPRHAALRSRRTAAVIMGPRSSHNPST-- 142
           PPMG TEN S T+LSSGNP LDFFFH+    SP     R        +    SH+P T  
Sbjct: 50  PPMGLTENFSPTFLSSGNPCLDFFFHIVPDTSPDDLIQR--------LAISWSHDPLTTL 101

Query: 141 ----NLQPERGQGHRKIR*RKLLHGGALAAQKPPQNPLACNLTVIVSFGY 4
               NL+  RG G      ++  +  A    K     LA N+  +V FGY
Sbjct: 102 KLICNLRGVRGTGKSD---KEGFYTAAFWLYKNHPKTLALNVPALVDFGY 148


>ref|XP_002863659.1| hypothetical protein ARALYDRAFT_494659 [Arabidopsis lyrata subsp.
           lyrata] gi|297309494|gb|EFH39918.1| hypothetical protein
           ARALYDRAFT_494659 [Arabidopsis lyrata subsp. lyrata]
          Length = 648

 Score =  100 bits (250), Expect = 9e-20
 Identities = 44/61 (72%), Positives = 51/61 (83%)
 Frame = -3

Query: 227 YVVPDTPPSDLAERLQSSWAHDPLTTLQLICNLRGVRATEKSDKESFYTAVHWLHKNHPR 48
           ++VPDTP  DL +RL  SW+HDPLTTL+LICNLRGVR T KSDKE FYTA  WL+KNHP+
Sbjct: 67  HIVPDTPSEDLIQRLAISWSHDPLTTLKLICNLRGVRGTGKSDKEGFYTAALWLYKNHPK 126

Query: 47  T 45
           T
Sbjct: 127 T 127



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 41/110 (37%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
 Frame = -2

Query: 315 VQYPPMGFTENLSATYLSSGNPFLDFFFHVRSPRHAALRSRRTAAVIMGPRSSHNPST-- 142
           ++ P MG TEN S T+LSSGNP LDFFFH+     +    +R A        SH+P T  
Sbjct: 39  LEEPRMGLTENFSPTFLSSGNPCLDFFFHIVPDTPSEDLIQRLAI-----SWSHDPLTTL 93

Query: 141 ----NLQPERGQGHRKIR*RKLLHGGALAAQKPPQNPLACNLTVIVSFGY 4
               NL+  RG G      ++  +  AL   K     LA N+  +V FGY
Sbjct: 94  KLICNLRGVRGTGKSD---KEGFYTAALWLYKNHPKTLALNIPALVDFGY 140


>ref|NP_199152.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8843892|dbj|BAA97418.1| unnamed protein product
           [Arabidopsis thaliana] gi|71905593|gb|AAZ52774.1|
           hypothetical protein At5g43390 [Arabidopsis thaliana]
           gi|91805687|gb|ABE65572.1| hypothetical protein
           At5g43390 [Arabidopsis thaliana]
           gi|332007572|gb|AED94955.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 643

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/61 (70%), Positives = 51/61 (83%)
 Frame = -3

Query: 227 YVVPDTPPSDLAERLQSSWAHDPLTTLQLICNLRGVRATEKSDKESFYTAVHWLHKNHPR 48
           ++VPDTP  DL +RL  SW+HDPLTTL+L+CNLRGVR T KSDKE FYTA  WL+KNHP+
Sbjct: 65  HIVPDTPSDDLIQRLAISWSHDPLTTLKLLCNLRGVRGTGKSDKEGFYTAALWLYKNHPK 124

Query: 47  T 45
           T
Sbjct: 125 T 125



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
 Frame = -2

Query: 315 VQYPPMGFTENLSATYLSSGNPFLDFFFHVRSPRHAALRSRRTAAVIMGPRSSHNPST-- 142
           ++ P MG TEN S T+L+SGNP LDFFFH+     +    +R A        SH+P T  
Sbjct: 37  LEEPQMGLTENFSPTFLTSGNPCLDFFFHIVPDTPSDDLIQRLAI-----SWSHDPLTTL 91

Query: 141 ----NLQPERGQGHRKIR*RKLLHGGALAAQKPPQNPLACNLTVIVSFGY 4
               NL+  RG G      ++  +  AL   K     LA N+  +V FGY
Sbjct: 92  KLLCNLRGVRGTGKSD---KEGFYTAALWLYKNHPKTLALNIPTLVDFGY 138


>ref|XP_002863658.1| hypothetical protein ARALYDRAFT_917317 [Arabidopsis lyrata subsp.
           lyrata] gi|297309493|gb|EFH39917.1| hypothetical protein
           ARALYDRAFT_917317 [Arabidopsis lyrata subsp. lyrata]
          Length = 657

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 43/61 (70%), Positives = 50/61 (81%)
 Frame = -3

Query: 227 YVVPDTPPSDLAERLQSSWAHDPLTTLQLICNLRGVRATEKSDKESFYTAVHWLHKNHPR 48
           ++VPDT P DL +RL  SW+HDPLTTL+L+CNLRGVR T KSDKE FYTA  WL KNHP+
Sbjct: 77  HIVPDTSPDDLIKRLAISWSHDPLTTLKLVCNLRGVRGTGKSDKEGFYTAAFWLFKNHPK 136

Query: 47  T 45
           T
Sbjct: 137 T 137



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 41/107 (38%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
 Frame = -2

Query: 306 PPMGFTENLSATYLSSGNPFLDFFFHVRSPRHAALRSRRTAAVIMGPRSSHNPST----- 142
           PPMG TEN S T+LSSGNP LDFFFH+          +R A        SH+P T     
Sbjct: 52  PPMGLTENFSPTFLSSGNPCLDFFFHIVPDTSPDDLIKRLAI-----SWSHDPLTTLKLV 106

Query: 141 -NLQPERGQGHRKIR*RKLLHGGALAAQKPPQNPLACNLTVIVSFGY 4
            NL+  RG G      ++  +  A    K     LA N+  +V FGY
Sbjct: 107 CNLRGVRGTGKSD---KEGFYTAAFWLFKNHPKTLALNVPALVDFGY 150


>ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|222842087|gb|EEE79634.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 42/61 (68%), Positives = 50/61 (81%)
 Frame = -3

Query: 227 YVVPDTPPSDLAERLQSSWAHDPLTTLQLICNLRGVRATEKSDKESFYTAVHWLHKNHPR 48
           +VVP+TPP  L +RL S+W H+PLTTL+LICNLRGVR T KSDKE FYT+  WLH NHP+
Sbjct: 73  HVVPNTPPESLQKRLHSAWNHNPLTTLKLICNLRGVRGTGKSDKEGFYTSAIWLHNNHPK 132

Query: 47  T 45
           T
Sbjct: 133 T 133



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
 Frame = -2

Query: 312 QYPPMGFTENLSATYLSSGNPFLDFFFH-VRSPRHAALRSRRTAAVIMGPRSSHNPSTNL 136
           Q P MG+TEN+SAT+LSSGNP LD FFH V +    +L+ R  +A    P ++     NL
Sbjct: 46  QLPQMGYTENMSATFLSSGNPCLDLFFHVVPNTPPESLQKRLHSAWNHNPLTTLKLICNL 105

Query: 135 QPERGQGHRKIR*RKLLHGGALAAQKPPQNPLACNLTVIVSFGY 4
           +  RG G      ++  +  A+         LACN+  +  FGY
Sbjct: 106 RGVRGTGKSD---KEGFYTSAIWLHNNHPKTLACNIPSMADFGY 146


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