BLASTX nr result

ID: Panax21_contig00032906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032906
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533129.1| PREDICTED: F-box protein At5g49610-like [Gly...   554   e-155
ref|XP_002316055.1| f-box family protein [Populus trichocarpa] g...   546   e-153
ref|XP_002273848.1| PREDICTED: F-box protein At5g49610-like [Vit...   540   e-151
gb|AFK41573.1| unknown [Lotus japonicus]                              538   e-150
ref|XP_003546303.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   537   e-150

>ref|XP_003533129.1| PREDICTED: F-box protein At5g49610-like [Glycine max]
          Length = 372

 Score =  554 bits (1427), Expect = e-155
 Identities = 254/327 (77%), Positives = 296/327 (90%)
 Frame = -3

Query: 1087 VCKLWYKLVSDKYFIQLYNEMSVRNPMVLIEVTESSHSRSSLICVDNFRGVSEFSLDFIK 908
            VCKLWY+L  DKYFIQLYNE+S +NPM+L+E+++SS S++SLICVDN RGVSEFSL+F+ 
Sbjct: 44   VCKLWYRLSLDKYFIQLYNEVSRKNPMILVEISDSSESKTSLICVDNLRGVSEFSLNFLN 103

Query: 907  DRVKVRASCNGLLCCSSIPDNGVYYVCNPMTKEYKLLPRSRERHVTRFYPDGEATLVGLA 728
            DRVKVRASCNGLLCCSSIPD GV+YVCNP+T+EY+LLP+SRERHVTRFYPDGEATLVGLA
Sbjct: 104  DRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREYRLLPKSRERHVTRFYPDGEATLVGLA 163

Query: 727  CNLLTQKYNVVLAGYHRSFGHRPDKTFICLVFDSELNKWRKFISMQDDQFTHMNKNQVVF 548
            C+   +K+NVVLAGYHR FGHRPD +FICLVFDSELNKWRKF+S QDD FTHMNKNQVVF
Sbjct: 164  CDSAYRKFNVVLAGYHRMFGHRPDGSFICLVFDSELNKWRKFVSFQDDHFTHMNKNQVVF 223

Query: 547  INGSLHWMTESCSCLLVLDLNYDIWRKISLPDELSCGTGNRVYLLESDGCLSVIQISEAW 368
            +N +LHW+T S + +LVLDL+ ++WRK+ LP +L CGTGNR+YLL+ DGCLSVI+ISEAW
Sbjct: 224  VNNALHWLTASSTYILVLDLSCEVWRKMQLPYDLICGTGNRIYLLDFDGCLSVIKISEAW 283

Query: 367  MNIWVLKDYESEEWGVVDRVSLRCIRGMVPGIFPISQTGLYVFLATHKQVMVYQRNTRVW 188
            MNIWVLKDY  +EW +VD+VSLRCIRGMVPGIFPISQTG  VFLATHKQ++VY R T+VW
Sbjct: 284  MNIWVLKDYWKDEWCMVDKVSLRCIRGMVPGIFPISQTGECVFLATHKQILVYHRKTQVW 343

Query: 187  KEMYSVKNSSTLPLWFSAHAYRSTIFS 107
            KEMYSVK SSTLPLWFSAHAYRST+FS
Sbjct: 344  KEMYSVKYSSTLPLWFSAHAYRSTMFS 370


>ref|XP_002316055.1| f-box family protein [Populus trichocarpa]
            gi|222865095|gb|EEF02226.1| f-box family protein [Populus
            trichocarpa]
          Length = 359

 Score =  546 bits (1407), Expect = e-153
 Identities = 253/326 (77%), Positives = 289/326 (88%)
 Frame = -3

Query: 1087 VCKLWYKLVSDKYFIQLYNEMSVRNPMVLIEVTESSHSRSSLICVDNFRGVSEFSLDFIK 908
            VCKLWYKL SDKYF+QLYNE++ +N MVL+EV++S   +SSLIC DN RGVSE SLDF+K
Sbjct: 31   VCKLWYKLSSDKYFVQLYNEVATKNSMVLVEVSDSPELKSSLICADNLRGVSELSLDFLK 90

Query: 907  DRVKVRASCNGLLCCSSIPDNGVYYVCNPMTKEYKLLPRSRERHVTRFYPDGEATLVGLA 728
            DRVKVRASCNGLLCCSSIPD GVYYVCNPMT+E++LLPRSRER VTRFYPDGEATLVGL 
Sbjct: 91   DRVKVRASCNGLLCCSSIPDKGVYYVCNPMTREFRLLPRSRERPVTRFYPDGEATLVGLG 150

Query: 727  CNLLTQKYNVVLAGYHRSFGHRPDKTFICLVFDSELNKWRKFISMQDDQFTHMNKNQVVF 548
            CNL  QK+NVVLAGYHR+FGHRPD TFIC+VFDS+ NKWRKF+S QDD+FT MN+NQVVF
Sbjct: 151  CNLSVQKFNVVLAGYHRTFGHRPDGTFICMVFDSDTNKWRKFVSFQDDRFTLMNRNQVVF 210

Query: 547  INGSLHWMTESCSCLLVLDLNYDIWRKISLPDELSCGTGNRVYLLESDGCLSVIQISEAW 368
            ++GSLHW+T  CS +L LDLN D+WRKISLPDE+    GNR +L+E DGCLSVIQISEAW
Sbjct: 211  VHGSLHWLTSGCSYILSLDLNCDVWRKISLPDEVIYRAGNRAHLVELDGCLSVIQISEAW 270

Query: 367  MNIWVLKDYESEEWGVVDRVSLRCIRGMVPGIFPISQTGLYVFLATHKQVMVYQRNTRVW 188
            M IW +KDYESE+W + DRVSLRCIRGMVPGIFPISQT  YVFLAT+KQV+VYQR +RVW
Sbjct: 271  MKIWAMKDYESEQWHLEDRVSLRCIRGMVPGIFPISQTREYVFLATYKQVLVYQRKSRVW 330

Query: 187  KEMYSVKNSSTLPLWFSAHAYRSTIF 110
            KEMYSVKNSS LPLWFSAHA+R++IF
Sbjct: 331  KEMYSVKNSSPLPLWFSAHAFRTSIF 356


>ref|XP_002273848.1| PREDICTED: F-box protein At5g49610-like [Vitis vinifera]
          Length = 357

 Score =  540 bits (1391), Expect = e-151
 Identities = 251/330 (76%), Positives = 290/330 (87%)
 Frame = -3

Query: 1090 CVCKLWYKLVSDKYFIQLYNEMSVRNPMVLIEVTESSHSRSSLICVDNFRGVSEFSLDFI 911
            CVC LWYKL SDKYF++LYN++ V+ P+VLIEVT+S   +SSLICVDN RGVSE SLDF+
Sbjct: 28   CVCTLWYKLCSDKYFVRLYNQVWVKKPVVLIEVTDSLECKSSLICVDNLRGVSELSLDFL 87

Query: 910  KDRVKVRASCNGLLCCSSIPDNGVYYVCNPMTKEYKLLPRSRERHVTRFYPDGEATLVGL 731
            KDRVKVRASCNGLLCCSSIPD GVYYV NP T+EY+LLP+SRER VTRFYPDGEATL+GL
Sbjct: 88   KDRVKVRASCNGLLCCSSIPDKGVYYVINPETREYRLLPKSRERPVTRFYPDGEATLIGL 147

Query: 730  ACNLLTQKYNVVLAGYHRSFGHRPDKTFICLVFDSELNKWRKFISMQDDQFTHMNKNQVV 551
            AC+L  QKYNVVLAG HR FG RP+K FICLVFDSE NKWRKF+S+QD+QFTHMNKNQVV
Sbjct: 148  ACDLSGQKYNVVLAGNHRCFGQRPEKMFICLVFDSESNKWRKFVSLQDEQFTHMNKNQVV 207

Query: 550  FINGSLHWMTESCSCLLVLDLNYDIWRKISLPDELSCGTGNRVYLLESDGCLSVIQISEA 371
            F+NGSLHW+T SCSC+L LDL+ ++W+KI LPDE+  G+GNRVYLL+ DGCLSVIQIS+A
Sbjct: 208  FLNGSLHWLTASCSCVLALDLDGEVWKKIKLPDEVGYGSGNRVYLLDYDGCLSVIQISDA 267

Query: 370  WMNIWVLKDYESEEWGVVDRVSLRCIRGMVPGIFPISQTGLYVFLATHKQVMVYQRNTRV 191
             MNIWVLKDYE  EW +VDRVSL+CIRG+VPG+FPISQTG YVF AT+KQV+VY+RN  V
Sbjct: 268  SMNIWVLKDYEMGEWNLVDRVSLQCIRGLVPGVFPISQTGEYVFFATYKQVLVYRRNGGV 327

Query: 190  WKEMYSVKNSSTLPLWFSAHAYRSTIFSFH 101
            WKEMYSVK S  LPLWFSAHA+R ++FS H
Sbjct: 328  WKEMYSVKGSFPLPLWFSAHAFRRSLFSCH 357


>gb|AFK41573.1| unknown [Lotus japonicus]
          Length = 360

 Score =  538 bits (1385), Expect = e-150
 Identities = 247/327 (75%), Positives = 295/327 (90%)
 Frame = -3

Query: 1087 VCKLWYKLVSDKYFIQLYNEMSVRNPMVLIEVTESSHSRSSLICVDNFRGVSEFSLDFIK 908
            VCKLW +L SDKYF+QLYNE+S +NPM+L+E++++S S+SSLICVD+ RGVSEFSL F+ 
Sbjct: 32   VCKLWCRLSSDKYFVQLYNEVSRKNPMILVEISDTSESKSSLICVDSLRGVSEFSLSFLN 91

Query: 907  DRVKVRASCNGLLCCSSIPDNGVYYVCNPMTKEYKLLPRSRERHVTRFYPDGEATLVGLA 728
            DRVKVRASCNGLLCCSSIPD GV+YVCNP+T+E++LLPRSRERHVTRFYPDGEATLVGLA
Sbjct: 92   DRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREFRLLPRSRERHVTRFYPDGEATLVGLA 151

Query: 727  CNLLTQKYNVVLAGYHRSFGHRPDKTFICLVFDSELNKWRKFISMQDDQFTHMNKNQVVF 548
            C+   Q++NVVLAG HR+FGHRPD +FICLVFDSEL+KWRKF+S QDD FTHMNKNQVVF
Sbjct: 152  CDSTCQRFNVVLAGCHRTFGHRPDGSFICLVFDSELSKWRKFVSFQDDHFTHMNKNQVVF 211

Query: 547  INGSLHWMTESCSCLLVLDLNYDIWRKISLPDELSCGTGNRVYLLESDGCLSVIQISEAW 368
            +N +LHW+T S + +LVLDL+ D WRK+ LP +L  GTGNR+YLL+ +GCLS+IQISEAW
Sbjct: 212  VNNALHWLTVSSTYILVLDLSCDNWRKMPLPYDLVRGTGNRIYLLDFNGCLSIIQISEAW 271

Query: 367  MNIWVLKDYESEEWGVVDRVSLRCIRGMVPGIFPISQTGLYVFLATHKQVMVYQRNTRVW 188
            MNIWVLKDY ++EW +VD+VSLRCIRGMVPGIFPISQTG YVFLATH+QV+VY RN++VW
Sbjct: 272  MNIWVLKDYWNDEWCMVDKVSLRCIRGMVPGIFPISQTGEYVFLATHRQVLVYHRNSKVW 331

Query: 187  KEMYSVKNSSTLPLWFSAHAYRSTIFS 107
            KE+YSVK SS+LPLWFSAHAYRS +FS
Sbjct: 332  KEIYSVKYSSSLPLWFSAHAYRSPMFS 358


>ref|XP_003546303.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At5g49610-like [Glycine
            max]
          Length = 359

 Score =  537 bits (1383), Expect = e-150
 Identities = 250/327 (76%), Positives = 291/327 (88%)
 Frame = -3

Query: 1087 VCKLWYKLVSDKYFIQLYNEMSVRNPMVLIEVTESSHSRSSLICVDNFRGVSEFSLDFIK 908
            VCKLWY+L  DKYFIQL  ++S +NPM+L+E+++SS S++SLICVDN RGVSEFSL+F+ 
Sbjct: 32   VCKLWYRLSLDKYFIQLX-QVSRKNPMILVEISDSSESKTSLICVDNLRGVSEFSLNFLN 90

Query: 907  DRVKVRASCNGLLCCSSIPDNGVYYVCNPMTKEYKLLPRSRERHVTRFYPDGEATLVGLA 728
            DRVKVRASCNGLLCCSSIPD GV+YVCNP+T+EY+LLP+SRERHVTRFYPDGEATLVGLA
Sbjct: 91   DRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREYRLLPKSRERHVTRFYPDGEATLVGLA 150

Query: 727  CNLLTQKYNVVLAGYHRSFGHRPDKTFICLVFDSELNKWRKFISMQDDQFTHMNKNQVVF 548
            C+   QK+NVVLAGYHR FGHRPD +FICLVFDSELNKWRKF+S QDD FTHMNKNQVVF
Sbjct: 151  CDSAHQKFNVVLAGYHRMFGHRPDGSFICLVFDSELNKWRKFVSFQDDHFTHMNKNQVVF 210

Query: 547  INGSLHWMTESCSCLLVLDLNYDIWRKISLPDELSCGTGNRVYLLESDGCLSVIQISEAW 368
            +N +LHW+T S + +LVLDL+ D+WRK+ LP  L  GTGNR+YLL+ DGCLSVI+ISEAW
Sbjct: 211  VNIALHWLTASSTYILVLDLSCDVWRKMQLPYNLIYGTGNRIYLLDLDGCLSVIKISEAW 270

Query: 367  MNIWVLKDYESEEWGVVDRVSLRCIRGMVPGIFPISQTGLYVFLATHKQVMVYQRNTRVW 188
            MNIWVLKDY  +EW +VD+VSLRCIRGMVPGIFPISQTG  VFLATHKQ++VY R T++W
Sbjct: 271  MNIWVLKDYWKDEWCMVDKVSLRCIRGMVPGIFPISQTGECVFLATHKQILVYHRKTQIW 330

Query: 187  KEMYSVKNSSTLPLWFSAHAYRSTIFS 107
            KEMYSVK  STLPLWFSAHAYRST+FS
Sbjct: 331  KEMYSVKYRSTLPLWFSAHAYRSTMFS 357


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