BLASTX nr result

ID: Panax21_contig00032902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032902
         (1455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316033.1| GRAS family transcription factor [Populus tr...   340   4e-91
ref|XP_002316034.1| GRAS family transcription factor [Populus tr...   335   2e-90
ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus commun...   332   1e-88
ref|XP_002316031.1| GRAS family transcription factor [Populus tr...   330   4e-88
ref|XP_002316030.1| GRAS family transcription factor [Populus tr...   327   4e-87

>ref|XP_002316033.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222865073|gb|EEF02204.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 561

 Score =  340 bits (873), Expect = 4e-91
 Identities = 184/382 (48%), Positives = 253/382 (66%), Gaps = 1/382 (0%)
 Frame = +2

Query: 182  DVEPALFLLASADKVANEQFDRARKLLNVCNQLASNTGNPVQRVVYYFAQALQERIDRKT 361
            +VE A  +LASA+KV N+Q+D AR+LLN C+ L+SNTGNPVQRVVYYF++AL++RIDR+T
Sbjct: 182  NVELAECMLASAEKVGNQQYDSARRLLNQCDLLSSNTGNPVQRVVYYFSEALRKRIDRET 241

Query: 362  GSSSSEGQEYCKRWLLDLEESITNLKPTXXXXXXXXXXXXIHKSVGIQAILDTMVSSRRV 541
            G  +SE  E     L D+ E++    P             +    G QAIL+ M  ++R+
Sbjct: 242  GKVASESLESD---LFDVYEAVMIPNPIIQACYEGIPFYQVPHFAGTQAILENMAEAKRI 298

Query: 542  HLIDLGIRSGMHWPFLMQALKVRHECPLESLKITAVGTSSEEIIKETGKMLSQFAETMGL 721
            H+IDL I +G+ W  LM AL  R+ECPLE LKITAVGT+S++ I++TG  L  FA+T  +
Sbjct: 299  HVIDLKISNGLQWTVLMHALASRNECPLELLKITAVGTNSKQHIEDTGNRLKSFAQTTNI 358

Query: 722  PLSFKMVMVSEMNDLKEDMFELEAEETVGVYSSLVLRNFIGRFGQFETLIGVIKNLHPTV 901
            P SFK+VMVS M DLKED+FEL+A+E + VYS   L++ I +  Q   L+ V ++++P V
Sbjct: 359  PFSFKIVMVSSMLDLKEDLFELDADEQLAVYSEYALKSLIVQPNQLGHLMEVFRSINPCV 418

Query: 902  MVMIEKEADTTSLEFMDRFIGGLLHFGALFDSVEACMGASN-AHRMPLEADYFRLGIQQI 1078
            +VMIE EA+  S  F+ RFI  L +F A FD V+AC+  ++ + RM +E+ Y   GI+ I
Sbjct: 419  LVMIEIEANHNSRVFVHRFIETLFYFSAYFDCVDACLEHNDPSSRMIIESIYLGEGIRNI 478

Query: 1079 VTFDVEERSAWDMKIEGWRSLFNNFDMVEKELSMSSLYQANLVVDNSAFRSFCTISMDGK 1258
            V  + EER   ++KI+ WR     F MVE ELS +SL+QAN V+   AF S CT   DGK
Sbjct: 479  VASEGEERKIRNVKIDVWRKFLAQFGMVETELSEASLHQANFVIKKFAFGSCCTFDTDGK 538

Query: 1259 CLLSGWKGAPIFSVSAWEFLPE 1324
             LL GWKG PI S+S W+F+ +
Sbjct: 539  SLLIGWKGTPILSLSTWKFMSQ 560


>ref|XP_002316034.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222865074|gb|EEF02205.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 588

 Score =  335 bits (860), Expect(2) = 2e-90
 Identities = 176/382 (46%), Positives = 255/382 (66%)
 Frame = +2

Query: 170  EIDDDVEPALFLLASADKVANEQFDRARKLLNVCNQLASNTGNPVQRVVYYFAQALQERI 349
            E   +VE A  LLASA+KV N+QF+RA + LN C  L+SN  +PVQRVV+YF++AL+ERI
Sbjct: 201  EAAKNVELAELLLASAEKVGNQQFERANRFLNYCEHLSSNGESPVQRVVHYFSEALRERI 260

Query: 350  DRKTGSSSSEGQEYCKRWLLDLEESITNLKPTXXXXXXXXXXXXIHKSVGIQAILDTMVS 529
            DR+TG  + +  E  K    DL+ ++  L P             +    GIQAI++ +  
Sbjct: 261  DRETGRITPKWPE--KSHSFDLDRAMMTLNPAILACYQNVPFSQVAHFAGIQAIVEKVNR 318

Query: 530  SRRVHLIDLGIRSGMHWPFLMQALKVRHECPLESLKITAVGTSSEEIIKETGKMLSQFAE 709
            ++R+H+IDL IR+G+ W  LMQAL  +HE PLE LKI+A+G++S+E+I++TGK L  FAE
Sbjct: 319  AKRIHIIDLEIRNGVQWTVLMQALVSQHESPLELLKISAIGSTSKELIEDTGKRLMSFAE 378

Query: 710  TMGLPLSFKMVMVSEMNDLKEDMFELEAEETVGVYSSLVLRNFIGRFGQFETLIGVIKNL 889
            TM +P SFK+VMVS+M DLK+D+FEL AEE V VY+   LR+ I    + ++++ V +N+
Sbjct: 379  TMNIPFSFKVVMVSDMLDLKKDLFELGAEEAVAVYAENSLRSLIALPNRLDSIMKVFRNI 438

Query: 890  HPTVMVMIEKEADTTSLEFMDRFIGGLLHFGALFDSVEACMGASNAHRMPLEADYFRLGI 1069
            +P ++V++E EA+  S  F++RFI  L  + A FD  +ACMG  + +RM  E+ Y R  I
Sbjct: 439  NPRIVVVMEVEANNNSPSFVNRFIEALFFYSAYFDCFDACMGRDSPNRMIAESKYIRQEI 498

Query: 1070 QQIVTFDVEERSAWDMKIEGWRSLFNNFDMVEKELSMSSLYQANLVVDNSAFRSFCTISM 1249
            + IV  + EER    +K++ WR+ F  F MVE ELS SSLYQA+L+++  A  S CT+ M
Sbjct: 499  RNIVATEGEERKIRHVKLDVWRTFFARFAMVETELSKSSLYQASLLLNKIARWSSCTLDM 558

Query: 1250 DGKCLLSGWKGAPIFSVSAWEF 1315
            + K L+ GWKG P+ S+S W+F
Sbjct: 559  NEKSLVIGWKGTPMHSLSVWKF 580



 Score = 25.4 bits (54), Expect(2) = 2e-90
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +1

Query: 4   RAEQGNNTIHSATCTPSRK----ELSTVDTIKVAMEKFLGFTSQSAGDASVL 147
           R   G  T+  ++  P  K    ELST + +K+A  KF+   S+    AS+L
Sbjct: 136 RQFDGERTVERSSGAPRAKVIGTELSTEEIMKMAGAKFIQSFSRMVDTASML 187


>ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus communis]
            gi|223537292|gb|EEF38923.1| DELLA protein GAI1, putative
            [Ricinus communis]
          Length = 594

 Score =  332 bits (852), Expect = 1e-88
 Identities = 166/378 (43%), Positives = 255/378 (67%)
 Frame = +2

Query: 185  VEPALFLLASADKVANEQFDRARKLLNVCNQLASNTGNPVQRVVYYFAQALQERIDRKTG 364
            VE A  LLASA+++ N+Q+D A +LL  C+ ++SNTGNPVQRVVYYFA+AL +RID +TG
Sbjct: 209  VELAESLLASAERIGNQQYDSASRLLKQCDSISSNTGNPVQRVVYYFAEALHDRIDIETG 268

Query: 365  SSSSEGQEYCKRWLLDLEESITNLKPTXXXXXXXXXXXXIHKSVGIQAILDTMVSSRRVH 544
             + S+  E  K+   +++E++    PT            +    GIQAI+D +  ++++H
Sbjct: 269  KTKSK--ELGKKQAFEIDEAMMTPNPTILASHLETPFCQVAHFAGIQAIVDNVADAKKIH 326

Query: 545  LIDLGIRSGMHWPFLMQALKVRHECPLESLKITAVGTSSEEIIKETGKMLSQFAETMGLP 724
            ++DL +R GM W  LMQAL  R +CPLE LKITA+GT+S E+I+ TGK L  FAETM + 
Sbjct: 327  ILDLSLRYGMQWTVLMQALVSRCDCPLEHLKITAIGTTSRELIENTGKRLISFAETMNIA 386

Query: 725  LSFKMVMVSEMNDLKEDMFELEAEETVGVYSSLVLRNFIGRFGQFETLIGVIKNLHPTVM 904
             SFKM +VS++ DLKED+ +L+  ETV +Y + + RN I    + ++++ +IKN++P V+
Sbjct: 387  FSFKMALVSDLLDLKEDLLDLDDGETVAIYFAYLPRNLISLPNRLDSMMRMIKNVNPCVI 446

Query: 905  VMIEKEADTTSLEFMDRFIGGLLHFGALFDSVEACMGASNAHRMPLEADYFRLGIQQIVT 1084
            V+ E EA+  S  F++RF+  L ++ A FD ++ACM  ++ +RM +E+ YF +GI+ ++ 
Sbjct: 447  VVAEVEANHNSPTFVNRFVEALFYYSAYFDCLDACMERNDKNRMIMESMYFGIGIKNMIA 506

Query: 1085 FDVEERSAWDMKIEGWRSLFNNFDMVEKELSMSSLYQANLVVDNSAFRSFCTISMDGKCL 1264
             + EER   ++K++ WR+ F  F MVE +LS S+L QANL+V   A  +  T+  +GK L
Sbjct: 507  TEGEERVIRNVKLDAWRAFFARFGMVETDLSSSALLQANLIVKKFACGNCFTLDRNGKSL 566

Query: 1265 LSGWKGAPIFSVSAWEFL 1318
            + GWKG P+ S+SAW+F+
Sbjct: 567  VLGWKGTPLHSLSAWKFI 584


>ref|XP_002316031.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222865071|gb|EEF02202.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 489

 Score =  330 bits (847), Expect = 4e-88
 Identities = 176/377 (46%), Positives = 245/377 (64%)
 Frame = +2

Query: 185  VEPALFLLASADKVANEQFDRARKLLNVCNQLASNTGNPVQRVVYYFAQALQERIDRKTG 364
            VE   FL+A+A+KV  +QFD   ++L++C+Q++S TGNPVQR+VYYF  AL+ERIDR+TG
Sbjct: 115  VELIQFLIAAAEKVGQQQFDHVSEMLSMCDQMSSATGNPVQRIVYYFTGALRERIDRETG 174

Query: 365  SSSSEGQEYCKRWLLDLEESITNLKPTXXXXXXXXXXXXIHKSVGIQAILDTMVSSRRVH 544
              +  G         ++EE++ +L P             I +  GIQAI+ +   ++R+H
Sbjct: 175  KITPRGLFTISS---NVEEAMVSLSPAILECHQRMPFCQIAQLTGIQAIVVSAADAKRLH 231

Query: 545  LIDLGIRSGMHWPFLMQALKVRHECPLESLKITAVGTSSEEIIKETGKMLSQFAETMGLP 724
            +IDL I SG+ W  LMQAL  R++CP E LKITA GT+S   I+ETGK L+QFAET+ LP
Sbjct: 232  VIDLKIDSGVQWIALMQALAARNDCPTELLKITAFGTTSMSKIQETGKRLAQFAETVNLP 291

Query: 725  LSFKMVMVSEMNDLKEDMFELEAEETVGVYSSLVLRNFIGRFGQFETLIGVIKNLHPTVM 904
             SF +VMV  +NDLK++ F++EA E + VYSSL L+N +      E L+ VI++L P +M
Sbjct: 292  FSFNLVMVLNINDLKKESFDIEAGEFIAVYSSLFLKNLLAHPNCLEYLMRVIRDLRPQIM 351

Query: 905  VMIEKEADTTSLEFMDRFIGGLLHFGALFDSVEACMGASNAHRMPLEADYFRLGIQQIVT 1084
            V+ E EA+  S  F DRF+  LL+F A+FD +EACM  S+  RM  E  Y    I+  + 
Sbjct: 352  VITEPEANHNSQAFKDRFVETLLYFSAIFDCLEACMDRSDPSRMGAEGLYLSYAIKNSIA 411

Query: 1085 FDVEERSAWDMKIEGWRSLFNNFDMVEKELSMSSLYQANLVVDNSAFRSFCTISMDGKCL 1264
             + +ER+   +KI+ WR+    F M E ELSM+SLYQA  VV   A  S+CT+ M+GKCL
Sbjct: 412  KEGKERTFQCVKIDFWRAYLAEFGMEETELSMTSLYQAIQVVKKFACGSYCTLDMNGKCL 471

Query: 1265 LSGWKGAPIFSVSAWEF 1315
            + GWKG PI S+S W+F
Sbjct: 472  IIGWKGTPINSLSVWKF 488


>ref|XP_002316030.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222865070|gb|EEF02201.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 446

 Score =  327 bits (839), Expect = 4e-87
 Identities = 181/378 (47%), Positives = 242/378 (64%)
 Frame = +2

Query: 182  DVEPALFLLASADKVANEQFDRARKLLNVCNQLASNTGNPVQRVVYYFAQALQERIDRKT 361
            D+E AL LLASADK+ N+QFD A K LN+C  L+S  GN VQRVV+YFA+AL ERI+RK 
Sbjct: 54   DMELALLLLASADKIENQQFDNASKSLNLCGFLSSKRGNSVQRVVHYFAKALGERIERKI 113

Query: 362  GSSSSEGQEYCKRWLLDLEESITNLKPTXXXXXXXXXXXXIHKSVGIQAILDTMVSSRRV 541
            G  +  G E  K  LL  EE+   L P             + +  GIQA+++ + S+++V
Sbjct: 114  GVVTLTGME-SKGQLLHPEETTVTLNPALIACSLRQPYSQVSQFAGIQAVVERLTSAKKV 172

Query: 542  HLIDLGIRSGMHWPFLMQALKVRHECPLESLKITAVGTSSEEIIKETGKMLSQFAETMGL 721
            H IDL IRSG H   LMQAL  RHE P+E LKITAVGT+SE+ ++E G  LS FAET+ L
Sbjct: 173  HFIDLAIRSGGHCIVLMQALANRHESPVELLKITAVGTTSEQKMEEAGVKLSCFAETLSL 232

Query: 722  PLSFKMVMVSEMNDLKEDMFELEAEETVGVYSSLVLRNFIGRFGQFETLIGVIKNLHPTV 901
            P SFK + +  + DLKEDMFEL   E V ++S ++LR      G  E+L+GV++NL+P V
Sbjct: 233  PFSFKAITIENIKDLKEDMFELSDGEVVAIFSRIMLRTIKPHPGCMESLLGVLRNLNPRV 292

Query: 902  MVMIEKEADTTSLEFMDRFIGGLLHFGALFDSVEACMGASNAHRMPLEADYFRLGIQQIV 1081
            MV+ E EA+     F+DRF+  L  + A +D +E  M   + +RM LEA      I+ IV
Sbjct: 293  MVITEFEANHCLPIFIDRFLEALFFYSAFYDCLEFNMDPCDPYRMTLEA-CLGQEIRDIV 351

Query: 1082 TFDVEERSAWDMKIEGWRSLFNNFDMVEKELSMSSLYQANLVVDNSAFRSFCTISMDGKC 1261
              + ++R    +KI+GWR+ F    MVE+ELS SS YQA LV+ N A  + CT+  +GKC
Sbjct: 352  AAEDDKRMFQHLKIDGWRANFAKLGMVEEELSTSSFYQAELVLQNFASGNLCTLDRNGKC 411

Query: 1262 LLSGWKGAPIFSVSAWEF 1315
            L++GW+G PI SVSAW F
Sbjct: 412  LITGWRGTPILSVSAWRF 429


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