BLASTX nr result

ID: Panax21_contig00032901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032901
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267...   152   4e-35
ref|XP_002326860.1| chromatin remodeling complex subunit [Populu...   149   2e-34
ref|XP_002892292.1| hypothetical protein ARALYDRAFT_470549 [Arab...   146   2e-33
gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]            145   3e-33
ref|NP_172040.2| chromatin remodeling 31 [Arabidopsis thaliana] ...   145   3e-33

>ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267731 [Vitis vinifera]
          Length = 1070

 Score =  152 bits (383), Expect = 4e-35
 Identities = 75/129 (58%), Positives = 98/129 (75%)
 Frame = +2

Query: 47  KAVRMVKLFSWSKGNSILGVSYNLYEKLAGEKFIRENGSKKRKKVVVDKENEELRKILLE 226
           K++RMVKL+SW K  SILG+SY L+EKLAGE+ + +  +KK K  V D    ++RKILLE
Sbjct: 609 KSIRMVKLYSWKKDRSILGISYTLFEKLAGERVLADQENKKVK--VQDYTKVQVRKILLE 666

Query: 227 FPGLVVFDEGHTPRNDRSCIWNTLLKLQTKKRVILSGTPFQNNFGELFNTLRLVRPAIAN 406
            PGL+V DEGHTPRN++S IW  L K+ T++R+ILSGTPFQNNF EL+NTL LVRP  A+
Sbjct: 667 LPGLLVLDEGHTPRNEQSLIWKALSKIDTERRIILSGTPFQNNFKELYNTLCLVRPKFAD 726

Query: 407 VLSKERTFG 433
            ++ E+  G
Sbjct: 727 RIAVEQYGG 735


>ref|XP_002326860.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222835175|gb|EEE73610.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 576

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/124 (58%), Positives = 94/124 (75%)
 Frame = +2

Query: 44  MKAVRMVKLFSWSKGNSILGVSYNLYEKLAGEKFIRENGSKKRKKVVVDKENEELRKILL 223
           + A+RMVKL+SW K  SILG+SY L+E+L GE+       K + KV    E++++RK+LL
Sbjct: 122 LNAIRMVKLYSWKKERSILGISYRLFEELVGEE-------KSKTKVSDKTEDDQVRKVLL 174

Query: 224 EFPGLVVFDEGHTPRNDRSCIWNTLLKLQTKKRVILSGTPFQNNFGELFNTLRLVRPAIA 403
           E PGL+V DEGHTPRNDRS IW  L K+QT+KR+ILSGTPFQNNF EL+NTL LV+P  A
Sbjct: 175 ELPGLLVLDEGHTPRNDRSRIWKALSKVQTQKRIILSGTPFQNNFDELYNTLCLVKPKFA 234

Query: 404 NVLS 415
           + +S
Sbjct: 235 DEIS 238


>ref|XP_002892292.1| hypothetical protein ARALYDRAFT_470549 [Arabidopsis lyrata subsp.
            lyrata] gi|297338134|gb|EFH68551.1| hypothetical protein
            ARALYDRAFT_470549 [Arabidopsis lyrata subsp. lyrata]
          Length = 1406

 Score =  146 bits (368), Expect = 2e-33
 Identities = 76/132 (57%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
 Frame = +2

Query: 2    AALELLKQNNKCL-DMKAVRMVKLFSWSKGNSILGVSYNLYEKLAGEKFIRENGSKKRKK 178
            AAL LL Q N        +RMVK++SW K  SILG+SYNLYEKLAG K   +  +K  ++
Sbjct: 925  AALGLLMQKNATARSNNEIRMVKIYSWIKSKSILGISYNLYEKLAGVKD-EDKKTKTVRE 983

Query: 179  VVVDKENEELRKILLEFPGLVVFDEGHTPRNDRSCIWNTLLKLQTKKRVILSGTPFQNNF 358
            V  DKE +++R+IL+  PGL+V DE HTPRN RSCIW TL K++T+KR++LSGTPFQNNF
Sbjct: 984  VKPDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNF 1043

Query: 359  GELFNTLRLVRP 394
             EL N L L RP
Sbjct: 1044 QELCNVLGLARP 1055


>gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]
          Length = 1465

 Score =  145 bits (366), Expect = 3e-33
 Identities = 76/132 (57%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
 Frame = +2

Query: 2    AALELLKQNNKCL-DMKAVRMVKLFSWSKGNSILGVSYNLYEKLAGEKFIRENGSKKRKK 178
            AAL LL Q N        +RMVK++SW K  SILG+SYNLYEKLAG K   +  +K  ++
Sbjct: 984  AALGLLMQKNATARSNNEIRMVKIYSWIKSKSILGISYNLYEKLAGVKD-EDKKTKMVRE 1042

Query: 179  VVVDKENEELRKILLEFPGLVVFDEGHTPRNDRSCIWNTLLKLQTKKRVILSGTPFQNNF 358
            V  DKE +++R+IL+  PGL+V DE HTPRN RSCIW TL K++T+KR++LSGTPFQNNF
Sbjct: 1043 VKPDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNF 1102

Query: 359  GELFNTLRLVRP 394
             EL N L L RP
Sbjct: 1103 LELCNVLGLARP 1114


>ref|NP_172040.2| chromatin remodeling 31 [Arabidopsis thaliana]
            gi|332189724|gb|AEE27845.1| chromatin remodeling 31
            [Arabidopsis thaliana]
          Length = 1410

 Score =  145 bits (366), Expect = 3e-33
 Identities = 76/132 (57%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
 Frame = +2

Query: 2    AALELLKQNNKCL-DMKAVRMVKLFSWSKGNSILGVSYNLYEKLAGEKFIRENGSKKRKK 178
            AAL LL Q N        +RMVK++SW K  SILG+SYNLYEKLAG K   +  +K  ++
Sbjct: 929  AALGLLMQKNATARSNNEIRMVKIYSWIKSKSILGISYNLYEKLAGVKD-EDKKTKMVRE 987

Query: 179  VVVDKENEELRKILLEFPGLVVFDEGHTPRNDRSCIWNTLLKLQTKKRVILSGTPFQNNF 358
            V  DKE +++R+IL+  PGL+V DE HTPRN RSCIW TL K++T+KR++LSGTPFQNNF
Sbjct: 988  VKPDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNF 1047

Query: 359  GELFNTLRLVRP 394
             EL N L L RP
Sbjct: 1048 LELCNVLGLARP 1059


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