BLASTX nr result

ID: Panax21_contig00032879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032879
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321851.1| predicted protein [Populus trichocarpa] gi|2...   145   8e-33
ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g...   144   2e-32
ref|XP_003534040.1| PREDICTED: clp protease-related protein At4g...   143   3e-32
ref|NP_001242487.1| uncharacterized protein LOC100786582 [Glycin...   143   3e-32
ref|XP_002318870.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32

>ref|XP_002321851.1| predicted protein [Populus trichocarpa] gi|222868847|gb|EEF05978.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  145 bits (365), Expect = 8e-33
 Identities = 67/89 (75%), Positives = 78/89 (87%)
 Frame = +2

Query: 2   KLLGRSDMYFFSPEHPPLTEPAQRALDWAINEKLKSGETGEVTTTHFLLGIWSEKESAGY 181
           +LLG+S+MYFFSPEHPPLTE AQRALDWAI EKLKSG++GE+TTTH LLGIWSEKESAG+
Sbjct: 72  ELLGKSEMYFFSPEHPPLTEQAQRALDWAIEEKLKSGDSGEITTTHILLGIWSEKESAGH 131

Query: 182 KILSELGFDDEKAKEIAKSMDKDFVFSFK 268
            IL  LGF+D+KAKE+AKSM  D   +FK
Sbjct: 132 NILETLGFNDDKAKEVAKSMSGDVALNFK 160


>ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Cucumis sativus]
           gi|449499662|ref|XP_004160878.1| PREDICTED: clp
           protease-related protein At4g12060, chloroplastic-like
           [Cucumis sativus]
          Length = 234

 Score =  144 bits (362), Expect = 2e-32
 Identities = 69/89 (77%), Positives = 80/89 (89%)
 Frame = +2

Query: 2   KLLGRSDMYFFSPEHPPLTEPAQRALDWAINEKLKSGETGEVTTTHFLLGIWSEKESAGY 181
           KLLG++DMYF SPEHPPLTEPAQ+ALDWA+ EKLKSG++GE+TT H LLGIWSE ESAG 
Sbjct: 147 KLLGKADMYFCSPEHPPLTEPAQKALDWAVAEKLKSGQSGEITTGHLLLGIWSE-ESAGR 205

Query: 182 KILSELGFDDEKAKEIAKSMDKDFVFSFK 268
           KIL+ LGFDDEKAKEIAK++DKD  FS+K
Sbjct: 206 KILATLGFDDEKAKEIAKTVDKDATFSYK 234


>ref|XP_003534040.1| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Glycine max]
          Length = 252

 Score =  143 bits (360), Expect = 3e-32
 Identities = 66/90 (73%), Positives = 79/90 (87%)
 Frame = +2

Query: 2   KLLGRSDMYFFSPEHPPLTEPAQRALDWAINEKLKSGETGEVTTTHFLLGIWSEKESAGY 181
           +LLG+SD+YFFSPEHPPLTEPAQ+ALDWAI EKLKSGE GE+  TH LLGIWS+KESAG 
Sbjct: 161 ELLGKSDLYFFSPEHPPLTEPAQKALDWAIEEKLKSGEGGEINVTHLLLGIWSQKESAGQ 220

Query: 182 KILSELGFDDEKAKEIAKSMDKDFVFSFKK 271
           +IL+ LGF+DEKAKE++KS+D D   SFK+
Sbjct: 221 QILATLGFNDEKAKELSKSIDGDVDLSFKR 250


>ref|NP_001242487.1| uncharacterized protein LOC100786582 [Glycine max]
           gi|255639105|gb|ACU19852.1| unknown [Glycine max]
          Length = 260

 Score =  143 bits (360), Expect = 3e-32
 Identities = 66/90 (73%), Positives = 79/90 (87%)
 Frame = +2

Query: 2   KLLGRSDMYFFSPEHPPLTEPAQRALDWAINEKLKSGETGEVTTTHFLLGIWSEKESAGY 181
           +LLG+SD+YFFSPEHPPLTEPAQ+ALDWAI EKLKSGE GE++ TH LLGIWS+KESAG 
Sbjct: 169 ELLGKSDLYFFSPEHPPLTEPAQKALDWAIEEKLKSGEGGEISVTHLLLGIWSQKESAGQ 228

Query: 182 KILSELGFDDEKAKEIAKSMDKDFVFSFKK 271
           +IL  LGF+DEKAKE+AK++D D   SFK+
Sbjct: 229 QILDTLGFNDEKAKELAKTIDGDVDLSFKR 258


>ref|XP_002318870.1| predicted protein [Populus trichocarpa] gi|222859543|gb|EEE97090.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  142 bits (359), Expect = 4e-32
 Identities = 66/88 (75%), Positives = 77/88 (87%)
 Frame = +2

Query: 5   LLGRSDMYFFSPEHPPLTEPAQRALDWAINEKLKSGETGEVTTTHFLLGIWSEKESAGYK 184
           LLG+S+MYFFSPEHPPLTE AQRALDWA+ EKLKSG++GE+TTTH LLG WSEKESAG K
Sbjct: 71  LLGKSEMYFFSPEHPPLTEQAQRALDWAVEEKLKSGDSGEITTTHILLGTWSEKESAGCK 130

Query: 185 ILSELGFDDEKAKEIAKSMDKDFVFSFK 268
           IL  LGF+D+KAKE+A+SM+ D   SFK
Sbjct: 131 ILETLGFNDDKAKEVAESMNGDVALSFK 158


Top