BLASTX nr result

ID: Panax21_contig00032878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032878
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300382.1| predicted protein [Populus trichocarpa] gi|1...   184   6e-45
ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245...   177   6e-43
gb|AFK47679.1| unknown [Lotus japonicus]                              177   1e-42
ref|XP_002266196.2| PREDICTED: cellulose synthase-like protein E...   177   1e-42
ref|XP_002522778.1| coated vesicle membrane protein, putative [R...   177   1e-42

>ref|XP_002300382.1| predicted protein [Populus trichocarpa] gi|118482006|gb|ABK92934.1|
           unknown [Populus trichocarpa]
           gi|222847640|gb|EEE85187.1| predicted protein [Populus
           trichocarpa]
          Length = 213

 Score =  184 bits (467), Expect = 6e-45
 Identities = 89/132 (67%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
 Frame = +1

Query: 70  FGIRFLLDREECLSHKVEF-GATVRFSFVVIKVHGWREAMNVGVDLVVKGPSGEQIHDFR 246
           FGIRF++DREEC SH V++ G TV  SFVV+KV       + GVDLVVKGPSG+QIHDFR
Sbjct: 25  FGIRFVIDREECFSHDVKYEGDTVHVSFVVVKVDSSWHYSDDGVDLVVKGPSGDQIHDFR 84

Query: 247 DKTKEMFDFAALQKGVYRFCFTNKSPFHETIDFDVHSSYIFVYDEHAKDEHFKTLMEEIA 426
           DK  E  +F A QKGV+RFCFTNKSP+HETIDFDVH  +   YDEHAKDEHF+ L+E+I+
Sbjct: 85  DKISEKIEFVAHQKGVHRFCFTNKSPYHETIDFDVHVGHFSYYDEHAKDEHFQPLLEQIS 144

Query: 427 KLEEALYNILYE 462
           KLEEALYNI +E
Sbjct: 145 KLEEALYNIQFE 156


>ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245903 isoform 2 [Vitis
           vinifera] gi|225447506|ref|XP_002265305.1| PREDICTED:
           uncharacterized protein LOC100245903 isoform 1 [Vitis
           vinifera] gi|296085048|emb|CBI28463.3| unnamed protein
           product [Vitis vinifera]
          Length = 214

 Score =  177 bits (450), Expect = 6e-43
 Identities = 85/131 (64%), Positives = 102/131 (77%), Gaps = 1/131 (0%)
 Frame = +1

Query: 73  GIRFLLDREECLSHKVEF-GATVRFSFVVIKVHGWREAMNVGVDLVVKGPSGEQIHDFRD 249
           GIRF++DRE+C SH V++ G TV  SFVVIK          GVDLV+KGPSG+QIHDFRD
Sbjct: 27  GIRFVVDREDCFSHDVQYEGDTVHVSFVVIKADASWHYAEDGVDLVIKGPSGDQIHDFRD 86

Query: 250 KTKEMFDFAALQKGVYRFCFTNKSPFHETIDFDVHSSYIFVYDEHAKDEHFKTLMEEIAK 429
           KT E F+F A +KG++RFCFTNKSP+ ETIDFDVH  +   YD+HAKDEHF  L+E+IAK
Sbjct: 87  KTSEKFEFVAQKKGLHRFCFTNKSPYQETIDFDVHVGHFTYYDQHAKDEHFNPLLEQIAK 146

Query: 430 LEEALYNILYE 462
           LEEALYNI +E
Sbjct: 147 LEEALYNIQFE 157


>gb|AFK47679.1| unknown [Lotus japonicus]
          Length = 212

 Score =  177 bits (448), Expect = 1e-42
 Identities = 85/131 (64%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
 Frame = +1

Query: 73  GIRFLLDREECLSHKVEF-GATVRFSFVVIKVHGWREAMNVGVDLVVKGPSGEQIHDFRD 249
           GIRF++DR+EC SH V++ G TV  SFVVIK        + GVDLVVKGP+GEQIHDFRD
Sbjct: 25  GIRFVIDRDECFSHDVKYEGDTVHISFVVIKADSPWHYGDEGVDLVVKGPAGEQIHDFRD 84

Query: 250 KTKEMFDFAALQKGVYRFCFTNKSPFHETIDFDVHSSYIFVYDEHAKDEHFKTLMEEIAK 429
           KT E F+F A + GV++FCFTNKSP+HETIDFDVH  +   Y++HAKDEHF  L+E+IAK
Sbjct: 85  KTSEKFEFVAHKSGVHKFCFTNKSPYHETIDFDVHVGHFSYYEQHAKDEHFTPLLEQIAK 144

Query: 430 LEEALYNILYE 462
           LEEALYNI +E
Sbjct: 145 LEEALYNIQFE 155


>ref|XP_002266196.2| PREDICTED: cellulose synthase-like protein E1 [Vitis vinifera]
          Length = 922

 Score =  177 bits (448), Expect = 1e-42
 Identities = 85/131 (64%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
 Frame = +1

Query: 73   GIRFLLDREECLSHKVEF-GATVRFSFVVIKVHGWREAMNVGVDLVVKGPSGEQIHDFRD 249
            GIRF++DREEC SH VE+ G T+  SFVVIKV         GVDLVVKGPSG QI D+RD
Sbjct: 735  GIRFVIDREECFSHNVEYEGDTIHASFVVIKVDASWHYNKDGVDLVVKGPSGNQIQDYRD 794

Query: 250  KTKEMFDFAALQKGVYRFCFTNKSPFHETIDFDVHSSYIFVYDEHAKDEHFKTLMEEIAK 429
            KT E F+F A +KG++RFCFTNKSP+HETIDFDV++ +   YD+HAKDEHF  L+E+I+K
Sbjct: 795  KTSEKFEFMAHEKGLHRFCFTNKSPYHETIDFDVYTGHFAYYDQHAKDEHFNPLLEQISK 854

Query: 430  LEEALYNILYE 462
            LEEALYNI +E
Sbjct: 855  LEEALYNIQFE 865


>ref|XP_002522778.1| coated vesicle membrane protein, putative [Ricinus communis]
            gi|223538016|gb|EEF39629.1| coated vesicle membrane
            protein, putative [Ricinus communis]
          Length = 938

 Score =  177 bits (448), Expect = 1e-42
 Identities = 84/131 (64%), Positives = 101/131 (77%), Gaps = 1/131 (0%)
 Frame = +1

Query: 73   GIRFLLDREECLSHKVEF-GATVRFSFVVIKVHGWREAMNVGVDLVVKGPSGEQIHDFRD 249
            GIRF++DREEC SH V++ G TV  SFVV+K          GVDLV+KGPSG+QIHDFRD
Sbjct: 751  GIRFVIDREECFSHDVKYEGDTVHVSFVVVKTDSSWHYTEDGVDLVIKGPSGDQIHDFRD 810

Query: 250  KTKEMFDFAALQKGVYRFCFTNKSPFHETIDFDVHSSYIFVYDEHAKDEHFKTLMEEIAK 429
            K  + ++F A QKGV+ FCFTNKSP+HETIDFDVH  +   YDEHAKDEHFK L+++I K
Sbjct: 811  KVSDKYEFMARQKGVHHFCFTNKSPYHETIDFDVHVGHFSYYDEHAKDEHFKPLLDQIWK 870

Query: 430  LEEALYNILYE 462
            LEEALYNI +E
Sbjct: 871  LEEALYNIQFE 881


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