BLASTX nr result

ID: Panax21_contig00032874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032874
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555215.1| PREDICTED: uncharacterized protein LOC100811...    72   1e-10
ref|XP_003536716.1| PREDICTED: uncharacterized protein LOC100788...    70   3e-10
ref|XP_002313701.1| predicted protein [Populus trichocarpa] gi|2...    66   5e-09
ref|XP_002521290.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
ref|XP_003604055.1| hypothetical protein MTR_3g118020 [Medicago ...    62   7e-08

>ref|XP_003555215.1| PREDICTED: uncharacterized protein LOC100811116 [Glycine max]
          Length = 411

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
 Frame = -3

Query: 359 VGRYTVTPSLAPILKLIIERHGDIALHCTLSDRICCSILVE-ICKTVENLQGIPFAKIQV 183
           VG+Y V  S APIL+ I E++GDI   C L   +  S  VE +C  V+ LQ  P  ++  
Sbjct: 229 VGKYHVKESFAPILRSIFEKYGDIGASCHLESVVMRSYYVECVCFVVQELQSTPIMQLAK 288

Query: 182 HHLNSLAAIIADAEHVNIRVDWLQNRHDKLKETILMLNQYQSLKCSLQEKD-EFITSTKE 6
             +  L AI+ D E   +RV WL+N  D++ E I +++++   + +    D E  T  KE
Sbjct: 289 SKIMELMAILKDVESAQLRVAWLRNIVDEIAENIELIDEHCMAEMAKANSDREMETLNKE 348


>ref|XP_003536716.1| PREDICTED: uncharacterized protein LOC100788258 [Glycine max]
          Length = 437

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
 Frame = -3

Query: 359 VGRYTVTPSLAPILKLIIERHGDIALHCTLSDRICCSILVE-ICKTVENLQGIPFAKIQV 183
           VG+Y V  S APIL+ I E++GDI   C L   +  S  VE +C  V+ LQ  P  ++  
Sbjct: 255 VGKYHVKESFAPILRSIFEKYGDIGASCHLESVVMRSYYVECVCFVVQELQSTPIMQLTK 314

Query: 182 HHLNSLAAIIADAEHVNIRVDWLQNRHDKLKETILMLNQYQSLKCSLQEKDEFITS 15
             +  L AI+ D E   +RV WL++  D++ E I +++++   + +    D  + S
Sbjct: 315 SKIKELMAILKDVESAQLRVAWLRSIVDEITENIELIDEHCVAETAKANSDREVES 370


>ref|XP_002313701.1| predicted protein [Populus trichocarpa] gi|222850109|gb|EEE87656.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
 Frame = -3

Query: 449 GSDTQSIESTFLRMAKAFNEPTSTADIGEKVGRYTVTPSLAPILKLIIERHGDIALHCTL 270
           GSD + ++S               +D    VG+Y V  ++A IL+LI E++GDIA    L
Sbjct: 342 GSDGEEVQSV-------------VSDSCVSVGKYHVRANVASILQLIFEKYGDIATGSRL 388

Query: 269 SDRICCSILVE-ICKTVENLQGIPFAKIQVHHLNSLAAIIADAEHVNIRVDWLQNRHDKL 93
                 +  +E +C  V+ LQ  PF ++    +  + A++ D E   I V WL++  + L
Sbjct: 389 ESASMRAYYLECLCFVVQELQCTPFKQLTKSKVREMLAVLKDVESAQIDVSWLRDILNDL 448

Query: 92  KETILMLNQYQSLKCSLQEKDEFITSTKE 6
            E + + NQ+Q+ + S    D+ I S K+
Sbjct: 449 AEGMELSNQHQAAEESKSNCDDLIESKKK 477


>ref|XP_002521290.1| conserved hypothetical protein [Ricinus communis]
           gi|223539558|gb|EEF41146.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 400

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
 Frame = -3

Query: 449 GSDTQSIESTFLRMAKAFNEPTST------ADIGEKVGRYTVTPSLAPILKLIIERHGDI 288
           G  T+S+  TF  +++A             +D    VG+Y V  + A IL+ II+++GDI
Sbjct: 182 GRSTESLNFTFSGISRATEGSDDEEILSVISDSCVSVGKYHVRANSASILQSIIDKYGDI 241

Query: 287 ALHCTLSDRICCSILVE-ICKTVENLQGIPFAKIQVHHLNSLAAIIADAEHVNIRVDWLQ 111
           A +C L      +  +E +C  V+ LQ     ++    +  L A++ D E   I V WL+
Sbjct: 242 AANCRLESTSLRTYYLECLCSVVQELQSTSLNQLTKSKVRELLAVLKDVESAQIDVSWLR 301

Query: 110 NRHDKLKETILMLNQYQSLKCSLQEKDEFITSTKE 6
           +  + L E + + N+ Q+ + +    D  I ST++
Sbjct: 302 SILNGLTEAVELNNKQQAAEEAKTNCDHVIESTRK 336


>ref|XP_003604055.1| hypothetical protein MTR_3g118020 [Medicago truncatula]
           gi|355493103|gb|AES74306.1| hypothetical protein
           MTR_3g118020 [Medicago truncatula]
          Length = 412

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
 Frame = -3

Query: 359 VGRYTVTPSLAPILKLIIERHGDIALHCTLSDRICCSILVE-ICKTVENLQGIPFAKIQV 183
           +G+Y V  S   IL+ I++++GDI   C L   +  S  +E +C  V+ LQ      I  
Sbjct: 237 IGKYNVKESFGSILQTIVDKYGDIGASCDLESVVMRSYYMECVCFVVQELQS-SSDSISK 295

Query: 182 HHLNSLAAIIADAEHVNIRVDWLQNRHDKLKETILMLNQYQSLKCSLQEKDEFITSTKE 6
             ++ L  I+ D E  ++RV WL N  D++ E I +++ +Q ++      D  + S +E
Sbjct: 296 SKVSELLDIVKDVESAHLRVAWLHNTLDEIVENIELISHHQDMEMEKANYDREMESLRE 354


Top