BLASTX nr result

ID: Panax21_contig00032851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032851
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26997.3| unnamed protein product [Vitis vinifera]              299   8e-79
ref|XP_002283623.1| PREDICTED: zinc finger protein 6 [Vitis vini...   299   8e-79
ref|XP_002527000.1| zinc finger protein, putative [Ricinus commu...   248   2e-63
ref|XP_002314851.1| predicted protein [Populus trichocarpa] gi|2...   234   2e-59
ref|XP_004135395.1| PREDICTED: zinc finger protein 6-like [Cucum...   233   4e-59

>emb|CBI26997.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  299 bits (765), Expect = 8e-79
 Identities = 153/218 (70%), Positives = 168/218 (77%)
 Frame = -3

Query: 942 MEELQFHTQPNHNTTTNGRLKLFGFNVIEEEDQDSTKTPSASSDSGVFPPPHDGRKYECQ 763
           M E+ +  +   +  TNGRLK+FGFNV E+ED +S+KTPS S +SG FP   D RKYECQ
Sbjct: 40  MAEIDYQAKAT-SAPTNGRLKIFGFNVSEDEDVESSKTPSGSPESGGFPATGD-RKYECQ 97

Query: 762 YCFREFANSQALGGHQNAHKKERQQLKRAQMQATRNAAVSYIRNPIVSAFAPPPHLLAPN 583
           YC REFANSQALGGHQNAHKKERQQLKRAQMQATRNAA SYIRNP++SAFAPPPHLLAP 
Sbjct: 98  YCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAATSYIRNPMISAFAPPPHLLAPA 157

Query: 582 GPMVMQPAAGTTSPSWVYVPRAAPPFQVSHGCVFPSGSSLGRRPGTLSYTGGGIAESTLT 403
           GP+V+   A   S SWVYVPR  PPF VSHGCVFPS S  GR   TLSY  GG+ ESTLT
Sbjct: 158 GPVVVPAGAAPQSASWVYVPRGPPPFHVSHGCVFPSSS--GRGAATLSY-AGGVGESTLT 214

Query: 402 SVEPQQGRARHHDGPSLSRFSRGDGGPTFDDAFGLDLH 289
           +  PQ       D PSLSRFSRGDGGPTFDDAFGLDLH
Sbjct: 215 TSAPQSRAHGRVDAPSLSRFSRGDGGPTFDDAFGLDLH 252


>ref|XP_002283623.1| PREDICTED: zinc finger protein 6 [Vitis vinifera]
           gi|147769067|emb|CAN72502.1| hypothetical protein
           VITISV_027276 [Vitis vinifera]
          Length = 221

 Score =  299 bits (765), Expect = 8e-79
 Identities = 153/218 (70%), Positives = 168/218 (77%)
 Frame = -3

Query: 942 MEELQFHTQPNHNTTTNGRLKLFGFNVIEEEDQDSTKTPSASSDSGVFPPPHDGRKYECQ 763
           M E+ +  +   +  TNGRLK+FGFNV E+ED +S+KTPS S +SG FP   D RKYECQ
Sbjct: 1   MAEIDYQAKAT-SAPTNGRLKIFGFNVSEDEDVESSKTPSGSPESGGFPATGD-RKYECQ 58

Query: 762 YCFREFANSQALGGHQNAHKKERQQLKRAQMQATRNAAVSYIRNPIVSAFAPPPHLLAPN 583
           YC REFANSQALGGHQNAHKKERQQLKRAQMQATRNAA SYIRNP++SAFAPPPHLLAP 
Sbjct: 59  YCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAATSYIRNPMISAFAPPPHLLAPA 118

Query: 582 GPMVMQPAAGTTSPSWVYVPRAAPPFQVSHGCVFPSGSSLGRRPGTLSYTGGGIAESTLT 403
           GP+V+   A   S SWVYVPR  PPF VSHGCVFPS S  GR   TLSY  GG+ ESTLT
Sbjct: 119 GPVVVPAGAAPQSASWVYVPRGPPPFHVSHGCVFPSSS--GRGAATLSY-AGGVGESTLT 175

Query: 402 SVEPQQGRARHHDGPSLSRFSRGDGGPTFDDAFGLDLH 289
           +  PQ       D PSLSRFSRGDGGPTFDDAFGLDLH
Sbjct: 176 TSAPQSRAHGRVDAPSLSRFSRGDGGPTFDDAFGLDLH 213


>ref|XP_002527000.1| zinc finger protein, putative [Ricinus communis]
           gi|223533635|gb|EEF35372.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 247

 Score =  248 bits (632), Expect = 2e-63
 Identities = 140/248 (56%), Positives = 167/248 (67%), Gaps = 30/248 (12%)
 Frame = -3

Query: 942 MEELQFHTQPNHNTTTNGRLKLFGFNVIEEEDQDSTKTP------SASSDSGVFPPPHDG 781
           MEEL + T+PN  TT   RLKLFGF+V  ++DQD   TP      S+SS S         
Sbjct: 1   MEELDYQTKPNSTTT---RLKLFGFSV-SDDDQDQLLTPIDSSIKSSSSTSPEAASTDSN 56

Query: 780 RKYECQYCFREFANSQALGGHQNAHKKERQQLKRAQMQATRN-----AAVSYIRNPIVSA 616
           RKYECQYC REFANSQALGGHQNAHKKERQQLKRAQMQATRN     AAVS+ RNP++SA
Sbjct: 57  RKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAAAAAAAVSFGRNPMISA 116

Query: 615 FAPPPHLLAPNGPMVMQPAAGTTSPSWVYVPRAAPPFQVSHGCVFPSGSS---------- 466
           FAPPPHLLAP GP+V+  AA     SWVY+PR APPF V+HGCVFP+G +          
Sbjct: 117 FAPPPHLLAPPGPVVLPAAAS----SWVYLPRPAPPFHVTHGCVFPTGPAGGGASGVAGG 172

Query: 465 -LGRRPGTLSYTGGGIAESTLTSVEPQQGRARHHDG--------PSLSRFSRGDGGPTFD 313
             G+  G L Y+GG + +   ++  PQQ ++R H+G         SLSRFS+GDGGP+FD
Sbjct: 173 FGGKSVGGLPYSGGAVGDMGFSN-GPQQAQSRVHNGRPDGLHGPTSLSRFSKGDGGPSFD 231

Query: 312 DAFGLDLH 289
           +A GLDLH
Sbjct: 232 EALGLDLH 239


>ref|XP_002314851.1| predicted protein [Populus trichocarpa] gi|222863891|gb|EEF01022.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  234 bits (597), Expect = 2e-59
 Identities = 146/246 (59%), Positives = 162/246 (65%), Gaps = 28/246 (11%)
 Frame = -3

Query: 942 MEELQFHTQPNHNTTTNGRLKLFGFNVIEEEDQ----DSTKTPSASS-DSGVFPPPH--- 787
           M EL + T+  HN+T+  RLKLFGFNV E+E+Q    DS K+ S +S D   F       
Sbjct: 1   MAELDYETK--HNSTST-RLKLFGFNVSEDEEQITTTDSLKSSSCNSPDDSSFATATTTV 57

Query: 786 ------DGRKYECQYCFREFANSQALGGHQNAHKKERQQLKRAQMQATRN---AAVSYIR 634
                 D RKYECQYC REFANSQALGGHQNAHKKERQQLKRAQMQATRN   AAVS+ R
Sbjct: 58  PATASGDSRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAAAAAVSFGR 117

Query: 633 NPIVSAFAPPPHLLAPNGPMVMQPAAGTTSPSWVYVPRAAPPFQVSHGCVFPSGSSLGRR 454
           NP++SAFAPPPHLLA     VM PAA   SPSWVY+PRAA PF VSHGCVFPSG S GR 
Sbjct: 118 NPMISAFAPPPHLLAQAAGQVMVPAA---SPSWVYLPRAATPFHVSHGCVFPSGVS-GRG 173

Query: 453 PGTLSY--TGGGIAESTLTSVEPQQGRAR--------HHDGP-SLSRFSRGDGGPTFDDA 307
            G L Y  + G    ST  S   QQ ++R         H GP SLSRFS GD GP FD+ 
Sbjct: 174 GGGLPYGDSVGDFGFSTSASGPHQQLQSRAHFSSVVDDHSGPTSLSRFSEGDDGPNFDEK 233

Query: 306 FGLDLH 289
            GLDLH
Sbjct: 234 LGLDLH 239


>ref|XP_004135395.1| PREDICTED: zinc finger protein 6-like [Cucumis sativus]
          Length = 229

 Score =  233 bits (595), Expect = 4e-59
 Identities = 128/224 (57%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
 Frame = -3

Query: 918 QPNHNTTTNGRLKLFGFNVIE---EEDQDSTKTPSASSDSGVFPPPHDGRKYECQYCFRE 748
           Q   N+TT  +LKLFGF+V E   E+D  + KTP+ SS+SGVF P  D RKYECQYC RE
Sbjct: 6   QTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTD-RKYECQYCCRE 64

Query: 747 FANSQALGGHQNAHKKERQQLKRAQMQATRNAAVSYIRNPIVSAFAPPPHLLAPNGP--- 577
           FANSQALGGHQNAHKKERQQLKRAQ+QATRNAAV+Y+RNPI+SAFAPPPHLLA   P   
Sbjct: 65  FANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATAAPAAA 124

Query: 576 ------MVMQPAAGTTSPSWVYVPRAAPP--FQVSHGCVFPSGSSLGRRPGTLSYTGGGI 421
                 ++  PA   TS SWVY+PR  PP     SHGCVFP+    G     LS  GGG+
Sbjct: 125 PPGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGG-GGTSAMLSAYGGGV 183

Query: 420 AESTLTSVEPQQGRARHHDGPSLSRFSRGDGGPTFDDAFGLDLH 289
             S   ++ PQ       +G SL RFS+G+ G  FD+  GLDLH
Sbjct: 184 GNSMAFTMGPQV------EGVSLKRFSKGENGSGFDEGIGLDLH 221


Top