BLASTX nr result

ID: Panax21_contig00032849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032849
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28040.3| unnamed protein product [Vitis vinifera]              145   3e-33
emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]   145   3e-33
ref|XP_002325006.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_004155724.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ...   131   5e-29
ref|XP_004142566.1| PREDICTED: putative E3 ubiquitin-protein lig...   131   5e-29

>emb|CBI28040.3| unnamed protein product [Vitis vinifera]
          Length = 1154

 Score =  145 bits (366), Expect = 3e-33
 Identities = 68/91 (74%), Positives = 80/91 (87%)
 Frame = -2

Query: 428  AALKIWSTSNYGMVGSVPSTMEVRSMAISTDIIYLGCKGGIVEVWCRKKLERKETLQTGT 249
            AA+KIWS +NY MVGS+ STMEVR++A+S+++IYLG K G VE+WCRKKL R ETLQTGT
Sbjct: 1064 AAVKIWSATNYSMVGSLASTMEVRTLAVSSELIYLGSKSGTVEIWCRKKLIRVETLQTGT 1123

Query: 248  NGKVVCMALDSDEEILVVGTSDGRIQAWGLS 156
            NGKV CMA+D DEE+LVVGTSDGRIQAW LS
Sbjct: 1124 NGKVQCMAVDGDEEVLVVGTSDGRIQAWELS 1154


>emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]
          Length = 1618

 Score =  145 bits (366), Expect = 3e-33
 Identities = 68/91 (74%), Positives = 80/91 (87%)
 Frame = -2

Query: 428  AALKIWSTSNYGMVGSVPSTMEVRSMAISTDIIYLGCKGGIVEVWCRKKLERKETLQTGT 249
            AA+KIWS +NY MVGS+ STMEVR++A+S+++IYLG K G VE+WCRKKL R ETLQTGT
Sbjct: 1528 AAVKIWSATNYSMVGSLASTMEVRTLAVSSELIYLGSKSGTVEIWCRKKLIRVETLQTGT 1587

Query: 248  NGKVVCMALDSDEEILVVGTSDGRIQAWGLS 156
            NGKV CMA+D DEE+LVVGTSDGRIQAW LS
Sbjct: 1588 NGKVQCMAVDGDEEVLVVGTSDGRIQAWELS 1618


>ref|XP_002325006.1| predicted protein [Populus trichocarpa] gi|222866440|gb|EEF03571.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  133 bits (334), Expect = 2e-29
 Identities = 62/92 (67%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
 Frame = -2

Query: 428 AALKIWSTSNYGMVGSVPSTMEVRSMAISTDIIYLGCKGGIVEVWCRKKLE-RKETLQTG 252
           A +KIW+ SNYG+VGS+PS +EVRSMAIS+D+IY+GCK G VE+W RKK + R E LQTG
Sbjct: 254 AGVKIWNASNYGLVGSLPSILEVRSMAISSDLIYVGCKAGTVEIWDRKKQQNRVEILQTG 313

Query: 251 TNGKVVCMALDSDEEILVVGTSDGRIQAWGLS 156
           TN KV+CMAL+++E++LV+GTS G+IQAWGLS
Sbjct: 314 TNDKVLCMALNANEDVLVIGTSTGQIQAWGLS 345


>ref|XP_004155724.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ubiquitin-protein ligase
            LIN-2-like [Cucumis sativus]
          Length = 1230

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/90 (65%), Positives = 77/90 (85%)
 Frame = -2

Query: 428  AALKIWSTSNYGMVGSVPSTMEVRSMAISTDIIYLGCKGGIVEVWCRKKLERKETLQTGT 249
            AA+KIWSTSNYGM+GS+ ++++VRSMA+S+D+ YLG KGG+VE+W R+K  + +TLQ G 
Sbjct: 1141 AAVKIWSTSNYGMIGSLTTSLDVRSMAVSSDLTYLGGKGGMVEIWSREKHNKIDTLQMGR 1200

Query: 248  NGKVVCMALDSDEEILVVGTSDGRIQAWGL 159
            N K+VCMALD  EE+LV+GTSDGRIQ WGL
Sbjct: 1201 NCKIVCMALDEREEVLVIGTSDGRIQGWGL 1230


>ref|XP_004142566.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Cucumis
            sativus]
          Length = 1336

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/90 (65%), Positives = 77/90 (85%)
 Frame = -2

Query: 428  AALKIWSTSNYGMVGSVPSTMEVRSMAISTDIIYLGCKGGIVEVWCRKKLERKETLQTGT 249
            AA+KIWSTSNYGM+GS+ ++++VRSMA+S+D+ YLG KGG+VE+W R+K  + +TLQ G 
Sbjct: 1247 AAVKIWSTSNYGMIGSLTTSLDVRSMAVSSDLTYLGGKGGMVEIWSREKHNKIDTLQMGR 1306

Query: 248  NGKVVCMALDSDEEILVVGTSDGRIQAWGL 159
            N K+VCMALD  EE+LV+GTSDGRIQ WGL
Sbjct: 1307 NCKIVCMALDEREEVLVIGTSDGRIQGWGL 1336


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