BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032841
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            108   4e-22
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...   101   9e-20
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    98   7e-19
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...    98   7e-19
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    98   9e-19

>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  108 bits (271), Expect = 4e-22
 Identities = 55/129 (42%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
 Frame = -2

Query: 366 HT*CTLAAGEMINGLYHMSFPM-------LSAANASTLLCSTTLWHQRLGHIPYAVMNKI 208
           HT      G M NGLY+ S  +       +S + A + L    LWH+RLGHIP+ V+ ++
Sbjct: 223 HTVKVKGTGSMENGLYYWSHIVSPTVAYSVSPSVALSTLDDVDLWHRRLGHIPHKVLQQM 282

Query: 207 PVISSSTERNCESCTICPLTKQICLPFPSSTTCSSDLFETIHCNLWGPYRTATRNGCRYF 28
            +   S+     SC ICPL KQ  LPFP S T + ++F+ IH ++WGPY+  T +G RYF
Sbjct: 283 QIPHISSSSKLTSCPICPLAKQTRLPFPQSPTRADNVFDLIHADVWGPYKFPTHDGNRYF 342

Query: 27  LTIVDDFSK 1
           LT+VDD S+
Sbjct: 343 LTLVDDCSR 351


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score =  101 bits (251), Expect = 9e-20
 Identities = 54/119 (45%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
 Frame = -2

Query: 351 LAAGEMINGLYHMSFPMLSAANASTLLCSTTLWHQRLGHIPYAVMNKIPV--ISSSTERN 178
           + AG  +NGLY       +AA  S  L S+ LWHQRLGH     ++ +P   ++SST  +
Sbjct: 475 IGAGRELNGLYFFRGVETAAAVTSKALPSSQLWHQRLGHPSSKALHLLPFSDVTSSTF-D 533

Query: 177 CESCTICPLTKQICLPFPSSTTCSSDLFETIHCNLWGPYRTATRNGCRYFLTIVDDFSK 1
            ++C IC   KQ   PFP S+  +S  FE +HC+LWGPYRT +  G RYFLT+VDD+S+
Sbjct: 534 SKTCEICIQAKQTRDPFPLSSNKTSFAFELVHCDLWGPYRTTSICGSRYFLTLVDDYSR 592


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 47/118 (39%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
 Frame = -2

Query: 351 LAAGEMINGLYHMSFPMLSAANASTLLCSTTLWHQRLGHIPYAVMNKIPVIS-SSTERNC 175
           +  GE  +G+Y+++    +  +   +     LWHQRLGH  ++V++ +P+ S SS   + 
Sbjct: 481 IGTGEERDGVYYLTDAATTTVHKVDITTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSS 540

Query: 174 ESCTICPLTKQICLPFPSSTTCSSDLFETIHCNLWGPYRTATRNGCRYFLTIVDDFSK 1
            SC +C   KQ    FP S+  S+D F  IHC++WGPYR  +  G  YFLTIVDDFS+
Sbjct: 541 RSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSR 598


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 1/118 (0%)
 Frame = -2

Query: 351 LAAGEMINGLYHMSFPMLSAANASTLLCSTTLWHQRLGHIPYAVMNKIPVI-SSSTERNC 175
           + +GE  +G+Y+++    +  + + +     LWHQRLGH  ++V++ +PV+ SSS     
Sbjct: 59  IGSGEERDGVYYLTDVATAKIHTAKVSSDQALWHQRLGHPSFSVLSSLPVLTSSSLSVGS 118

Query: 174 ESCTICPLTKQICLPFPSSTTCSSDLFETIHCNLWGPYRTATRNGCRYFLTIVDDFSK 1
            SC +C   KQ    FP ST  S + F  IHC++WGPYR  +  G  YFLTIVDDFS+
Sbjct: 119 RSCDVCFRAKQTREVFPVSTNKSIECFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSR 176


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 97.8 bits (242), Expect = 9e-19
 Identities = 47/118 (39%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
 Frame = -2

Query: 351 LAAGEMINGLYHMSFPMLSAANASTLLCSTTLWHQRLGHIPYAVMNKIPVIS-SSTERNC 175
           +  GE  +G+Y+++    +  +   +     LWHQRLGH  ++V++ +P+ S SS   + 
Sbjct: 481 IGTGEERDGVYYLTDAATTTVHKVDVTTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSS 540

Query: 174 ESCTICPLTKQICLPFPSSTTCSSDLFETIHCNLWGPYRTATRNGCRYFLTIVDDFSK 1
            SC +C   KQ    FP S+  S+D F  IHC++WGPYR  +  G  YFLTIVDDFS+
Sbjct: 541 RSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSR 598