BLASTX nr result

ID: Panax21_contig00032815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032815
         (1474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15987.3| unnamed protein product [Vitis vinifera]              391   e-106
ref|XP_002279930.1| PREDICTED: uncharacterized protein LOC100248...   391   e-106
ref|XP_002525610.1| conserved hypothetical protein [Ricinus comm...   383   e-104
ref|XP_002299819.1| predicted protein [Populus trichocarpa] gi|2...   380   e-103
ref|XP_002314116.1| predicted protein [Populus trichocarpa] gi|2...   375   e-101

>emb|CBI15987.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  391 bits (1004), Expect = e-106
 Identities = 198/325 (60%), Positives = 238/325 (73%), Gaps = 5/325 (1%)
 Frame = +2

Query: 227  WSFIKRIFSNSSSSVPALQTQPXXXXXXXXXXXXXXXXXXXXXXIPNDTFVSDXXXXXXX 406
            W ++K+IF+ S     ++ TQP                      +P    VSD       
Sbjct: 15   WFYLKKIFA-SKPCTASMDTQPATATVSSARSSLHSVVSVV---LPEMMVVSDPQ----- 65

Query: 407  XXXRKRPHGSFSDSDIS-DHRFLPLRNDIYPCPICGEIFHRPGSLEQHQSINHAVSELID 583
               RK P  +  +SDIS DH+F PLRNDI+PCP CGE+F +P +LEQHQ++ HAVSELID
Sbjct: 66   ---RKVPTATRPESDISADHQFFPLRNDIFPCPACGEVFQKPQNLEQHQALKHAVSELID 122

Query: 584  GDSGKNIVSIIFNTGWTNHVNTPNIYRVLKIHNSPKILTRFEEYREFVKSKAARNGAVQR 763
            GDSG NIV IIF TGWT+    P I R+LKIHNS KIL RFEEYRE VKSKAARNGAV+R
Sbjct: 123  GDSGNNIVRIIFKTGWTDSEKIPKIQRILKIHNSSKILARFEEYRESVKSKAARNGAVRR 182

Query: 764  RDERCIADGNELLRFHCSTFLCDLGQNGNSNICNQEYCSICGIIKSGFSPKMDGISTLST 943
            RDERCIADGNELLRFHCSTFLC+LGQNGNS++CN +YCS+CGII++GFSPK+DGISTLST
Sbjct: 183  RDERCIADGNELLRFHCSTFLCNLGQNGNSSVCNHQYCSVCGIIRTGFSPKLDGISTLST 242

Query: 944  SWRAHVAIPEEIVEEFSFMHVKRAMLVCRVIAGRVECDPDVVHKEDPGYGSLVGQT---- 1111
            SWRAH  IPE+I +EF FM+VKRAMLVCRV+AGR+  D D V KED G+ S+VG++    
Sbjct: 243  SWRAHATIPEDIEDEFRFMNVKRAMLVCRVVAGRIGSDQDEVDKEDGGFDSVVGRSAIGG 302

Query: 1112 DGFQTRLDDEDELLVYNPRAVLPCF 1186
             G  TRL D++ELLV+NPR+VLPCF
Sbjct: 303  GGSLTRLVDDEELLVFNPRSVLPCF 327


>ref|XP_002279930.1| PREDICTED: uncharacterized protein LOC100248366 isoform 1 [Vitis
            vinifera]
          Length = 386

 Score =  391 bits (1004), Expect = e-106
 Identities = 198/325 (60%), Positives = 238/325 (73%), Gaps = 5/325 (1%)
 Frame = +2

Query: 227  WSFIKRIFSNSSSSVPALQTQPXXXXXXXXXXXXXXXXXXXXXXIPNDTFVSDXXXXXXX 406
            W ++K+IF+ S     ++ TQP                      +P    VSD       
Sbjct: 68   WFYLKKIFA-SKPCTASMDTQPATATVSSARSSLHSVVSVV---LPEMMVVSDPQ----- 118

Query: 407  XXXRKRPHGSFSDSDIS-DHRFLPLRNDIYPCPICGEIFHRPGSLEQHQSINHAVSELID 583
               RK P  +  +SDIS DH+F PLRNDI+PCP CGE+F +P +LEQHQ++ HAVSELID
Sbjct: 119  ---RKVPTATRPESDISADHQFFPLRNDIFPCPACGEVFQKPQNLEQHQALKHAVSELID 175

Query: 584  GDSGKNIVSIIFNTGWTNHVNTPNIYRVLKIHNSPKILTRFEEYREFVKSKAARNGAVQR 763
            GDSG NIV IIF TGWT+    P I R+LKIHNS KIL RFEEYRE VKSKAARNGAV+R
Sbjct: 176  GDSGNNIVRIIFKTGWTDSEKIPKIQRILKIHNSSKILARFEEYRESVKSKAARNGAVRR 235

Query: 764  RDERCIADGNELLRFHCSTFLCDLGQNGNSNICNQEYCSICGIIKSGFSPKMDGISTLST 943
            RDERCIADGNELLRFHCSTFLC+LGQNGNS++CN +YCS+CGII++GFSPK+DGISTLST
Sbjct: 236  RDERCIADGNELLRFHCSTFLCNLGQNGNSSVCNHQYCSVCGIIRTGFSPKLDGISTLST 295

Query: 944  SWRAHVAIPEEIVEEFSFMHVKRAMLVCRVIAGRVECDPDVVHKEDPGYGSLVGQT---- 1111
            SWRAH  IPE+I +EF FM+VKRAMLVCRV+AGR+  D D V KED G+ S+VG++    
Sbjct: 296  SWRAHATIPEDIEDEFRFMNVKRAMLVCRVVAGRIGSDQDEVDKEDGGFDSVVGRSAIGG 355

Query: 1112 DGFQTRLDDEDELLVYNPRAVLPCF 1186
             G  TRL D++ELLV+NPR+VLPCF
Sbjct: 356  GGSLTRLVDDEELLVFNPRSVLPCF 380


>ref|XP_002525610.1| conserved hypothetical protein [Ricinus communis]
            gi|223535046|gb|EEF36728.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 448

 Score =  383 bits (984), Expect = e-104
 Identities = 203/327 (62%), Positives = 242/327 (74%), Gaps = 7/327 (2%)
 Frame = +2

Query: 227  WSFIKRIFSNSSSSVPALQTQPXXXXXXXXXXXXXXXXXXXXXXIPNDTFVSDXXXXXXX 406
            WS++KRIFS S +  P  Q Q                          D  VSD       
Sbjct: 126  WSYLKRIFS-SKAHKPISQAQSPAPTLASARSSQHSIVTVAVPQ--EDHQVSDITPP--- 179

Query: 407  XXXRKRPHGSFSDSDIS--DHRFLPLRNDIYPCPICGEIFHRPGSLEQHQSINHAVSELI 580
               RK+P GS  +SDIS  + +F PLRNDI+PC  CGEIF +P  LEQHQ+I HAVSEL+
Sbjct: 180  ---RKKPSGSCQESDISTSNDQFFPLRNDIFPCTACGEIFQKPQLLEQHQAIKHAVSELV 236

Query: 581  DGDSGKNIVSIIFNTGWTNHVNTPNIYRVLKIHNSPKILTRFEEYREFVKSKAARNGA-V 757
            DGDSGKNIV IIF TGW+     P I+R+LKIHNSPKIL+RFEEYRE VK+KAARN + +
Sbjct: 237  DGDSGKNIVHIIFKTGWSCKDKNPEIHRILKIHNSPKILSRFEEYRELVKAKAARNSSTI 296

Query: 758  QRRDERCIADGNELLRFHCSTFLCDLGQNGNSNICNQEYCSICGIIKSGFSPKMDGISTL 937
            +RRDERCIADGNELLRF+CSTF+CDLG NGNS+IC+Q+YCS+CGIIKSGFSPK+DGISTL
Sbjct: 297  KRRDERCIADGNELLRFYCSTFMCDLGVNGNSSICSQQYCSVCGIIKSGFSPKLDGISTL 356

Query: 938  STSWRAHVAIPEEIVEEFSFMHVKRAMLVCRVIAGRVECDPDV---VHKEDPGYGSLVGQ 1108
            S+SWRAHVA+PE+I EEF FM+VKRAMLVCRV+AGRV C+ +V   V+KED G+ S+VG+
Sbjct: 357  SSSWRAHVAVPEDIEEEFRFMNVKRAMLVCRVVAGRVGCEMEVEEEVNKEDGGFDSVVGR 416

Query: 1109 -TDGFQTRLDDEDELLVYNPRAVLPCF 1186
               G  TRL DE+ELLV+NPRAVLPCF
Sbjct: 417  GGSGVHTRL-DEEELLVFNPRAVLPCF 442


>ref|XP_002299819.1| predicted protein [Populus trichocarpa] gi|222847077|gb|EEE84624.1|
            predicted protein [Populus trichocarpa]
          Length = 279

 Score =  380 bits (975), Expect = e-103
 Identities = 184/260 (70%), Positives = 218/260 (83%), Gaps = 3/260 (1%)
 Frame = +2

Query: 416  RKRPHGSFSDSDIS-DHRFLPLRNDIYPCPICGEIFHRPGSLEQHQSINHAVSELIDGDS 592
            RK+  GS  + DIS DH+F PLRNDI+PC  CGE+F +P  LEQHQ+I HAV++L+DGDS
Sbjct: 15   RKKSTGSCEEPDISTDHQFFPLRNDIFPCTACGEVFQKPQLLEQHQAIKHAVTQLLDGDS 74

Query: 593  GKNIVSIIFNTGWTNHVNTPNIYRVLKIHNSPKILTRFEEYREFVKSKAARNGAVQRRDE 772
            GKNIV IIF TGW+    +P I R+LKIHNSPKIL+RFEEYREFVK+KAARN  ++RRDE
Sbjct: 75   GKNIVDIIFKTGWSCKEKSPEIRRILKIHNSPKILSRFEEYREFVKTKAARNSPIKRRDE 134

Query: 773  RCIADGNELLRFHCSTFLCDLGQNGNSNICNQEYCSICGIIKSGFSPKMDGISTLSTSWR 952
            RCIADGNELLRF CSTF+CDLG NG+S+ICNQ+YCS+CGIIKSGFSPKMDGISTLSTSWR
Sbjct: 135  RCIADGNELLRFFCSTFMCDLGLNGDSSICNQQYCSVCGIIKSGFSPKMDGISTLSTSWR 194

Query: 953  AHVAIPEEIVEEFSFMHVKRAMLVCRVIAGRVECDPDV-VHKEDPGYGSLVGQ-TDGFQT 1126
            AH+A PEEI EEF FM+VKRAMLVCRV+AGR+ CD D  + K+D G  S++G+   G  T
Sbjct: 195  AHMAFPEEIEEEFKFMNVKRAMLVCRVVAGRIGCDLDEDIDKQDSGSDSVLGRGGSGIHT 254

Query: 1127 RLDDEDELLVYNPRAVLPCF 1186
            R+ DE+ELLV+NPRAVLPCF
Sbjct: 255  RV-DEEELLVFNPRAVLPCF 273


>ref|XP_002314116.1| predicted protein [Populus trichocarpa] gi|222850524|gb|EEE88071.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  375 bits (964), Expect = e-101
 Identities = 197/323 (60%), Positives = 235/323 (72%), Gaps = 3/323 (0%)
 Frame = +2

Query: 227  WSFIKRIFSNSSSSVPALQTQPXXXXXXXXXXXXXXXXXXXXXXIPNDTFVSDXXXXXXX 406
            WS++K IFS+ SS        P                      IP +T + +       
Sbjct: 71   WSYLKSIFSSKSSKTQTQSGTPTLTSARSSQQSIVPT-------IPPETHLPELPP---- 119

Query: 407  XXXRKRPHGSFSDSDIS-DHRFLPLRNDIYPCPICGEIFHRPGSLEQHQSINHAVSELID 583
               RK+  GS  +SDIS DH F PLRNDI+PC  CGEIF +P  LEQHQ+  HAV++L+D
Sbjct: 120  ---RKKSSGSCEESDISTDHHFFPLRNDIFPCTACGEIFQKPQLLEQHQATKHAVTQLLD 176

Query: 584  GDSGKNIVSIIFNTGWTNHVNTPNIYRVLKIHNSPKILTRFEEYREFVKSKAARNGAVQR 763
            GDSGKNIV IIF TGW+    +P I+R+LKIHNSPKIL+RFEEYREFV++KAARN   +R
Sbjct: 177  GDSGKNIVHIIFKTGWSCKEKSPEIHRILKIHNSPKILSRFEEYREFVRAKAARNS--KR 234

Query: 764  RDERCIADGNELLRFHCSTFLCDLGQNGNSNICNQEYCSICGIIKSGFSPKMDGISTLST 943
             DERCIADGNELLRF+CSTF+CDLG N +S+ICNQ+YCS+CGIIKSGFSPKMDGISTLST
Sbjct: 235  GDERCIADGNELLRFYCSTFMCDLGLNEDSSICNQQYCSVCGIIKSGFSPKMDGISTLST 294

Query: 944  SWRAHVAIPEEIVEEFSFMHVKRAMLVCRVIAGRVECD-PDVVHKEDPGYGSLVGQ-TDG 1117
            SWRAH+AIPEEI EEF FM+VKRAMLVCRV+AGRV CD  + V K+D G  S++G+   G
Sbjct: 295  SWRAHMAIPEEIEEEFKFMNVKRAMLVCRVVAGRVGCDLEEDVDKQDGGSDSVLGRGGSG 354

Query: 1118 FQTRLDDEDELLVYNPRAVLPCF 1186
              TRL DE+ELLV+NPRAVLPCF
Sbjct: 355  VHTRL-DEEELLVFNPRAVLPCF 376


Top