BLASTX nr result

ID: Panax21_contig00032788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032788
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE10595.1| 4-coumarate CoA ligase [Lonicera japonica]             205   3e-51
ref|XP_002327954.1| 4-coumarate-coa ligase [Populus trichocarpa]...   184   8e-45
ref|XP_002336775.1| predicted protein [Populus trichocarpa] gi|2...   181   7e-44
gb|AGE10622.1| 4-coumarate CoA ligase, partial [Lonicera macrant...   176   2e-42
emb|CBI40068.3| unnamed protein product [Vitis vinifera]              163   1e-38

>gb|AGE10595.1| 4-coumarate CoA ligase [Lonicera japonica]
          Length = 540

 Score =  205 bits (522), Expect = 3e-51
 Identities = 112/171 (65%), Positives = 134/171 (78%)
 Frame = -3

Query: 513 VPLPPETTPLSATSYSLSLQLTSPWPDSTALIDSATGERVSYSEFTRLTKNLASYLQNLI 334
           +PLPPET  +S+ +YSLSLQLTSPWPDST LIDSATG+R+SYS+FT  T NL+S LQ+ +
Sbjct: 24  LPLPPETALISSATYSLSLQLTSPWPDSTXLIDSATGQRLSYSQFTTQTNNLSSSLQSHL 83

Query: 333 GLCYH*RTIRTAPNSTRIAILYFSLLSLGVIISPSNPISTEPDISRQIKLSQPVIAFATV 154
           GL         + NS +I +LYFSLLSLGVIISPSNP STE +ISRQIKLS+PVIAFAT 
Sbjct: 84  GLSKGDVAFILSLNSLQIPLLYFSLLSLGVIISPSNPSSTESEISRQIKLSKPVIAFATS 143

Query: 153 ATCHKITNLRYRTILIDSPEFESMMKSTASREVEHVEVNQFDVAAVMYSSG 1
           AT HKI  LR+ T+LIDSPEF SM  S + RE+  V V+Q D+AA+MYSSG
Sbjct: 144 ATSHKIPALRHGTVLIDSPEFVSMTTS-SGRELSCVGVSQCDIAAIMYSSG 193


>ref|XP_002327954.1| 4-coumarate-coa ligase [Populus trichocarpa]
           gi|224133074|ref|XP_002327955.1| acyl:coa ligase
           [Populus trichocarpa] gi|222837363|gb|EEE75742.1|
           4-coumarate-coa ligase [Populus trichocarpa]
           gi|222837364|gb|EEE75743.1| acyl:coa ligase [Populus
           trichocarpa]
          Length = 548

 Score =  184 bits (466), Expect = 8e-45
 Identities = 97/177 (54%), Positives = 127/177 (71%), Gaps = 6/177 (3%)
 Frame = -3

Query: 513 VPLPPETTPLSATSYSLSLQLT-SPWPDSTALIDSATGERVSYSEFTRLTKNLASYLQNL 337
           + LPPE TP SA  Y+LSL    SPWPDS A+I+S+T +++SYS+F    K+L  YLQN+
Sbjct: 29  IHLPPEETPFSAADYALSLHANHSPWPDSLAIINSSTSQKLSYSDFIERIKSLTLYLQNV 88

Query: 336 IGLCYH*RTIRTAPNSTRIAILYFSLLSLGVIISPSNPISTEPDISRQIKLSQPVIAFAT 157
             L  +       PNS ++ ILYFSLLSLGV+ISP+NPISTE +IS QI LS PVIAFA 
Sbjct: 89  TQLRKNDTAFILCPNSIQVPILYFSLLSLGVVISPANPISTESEISHQISLSNPVIAFAI 148

Query: 156 VATCHKITNLRYRTILIDSPEFESMM-----KSTASREVEHVEVNQFDVAAVMYSSG 1
             TCHK+  L++ TILIDSPEF+S++      +TA +++E V VNQ D+AA+M+SSG
Sbjct: 149 SKTCHKLPKLKHGTILIDSPEFDSIITMSPATTTARQDLEKVTVNQSDLAAIMFSSG 205


>ref|XP_002336775.1| predicted protein [Populus trichocarpa] gi|222836688|gb|EEE75081.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  181 bits (458), Expect = 7e-44
 Identities = 96/177 (54%), Positives = 125/177 (70%), Gaps = 6/177 (3%)
 Frame = -3

Query: 513 VPLPPETTPLSATSYSLSLQLT-SPWPDSTALIDSATGERVSYSEFTRLTKNLASYLQNL 337
           + LPPE TP SA  Y+LSL    SPWPDS A+I+S+T +++SYS+F    K+L  YLQN+
Sbjct: 29  IHLPPEETPFSAADYALSLHANHSPWPDSLAIINSSTSQKLSYSDFIERIKSLTLYLQNV 88

Query: 336 IGLCYH*RTIRTAPNSTRIAILYFSLLSLGVIISPSNPISTEPDISRQIKLSQPVIAFAT 157
             L  +       PNS ++ ILYFSLLSLGV+ISP+N ISTE +IS QI LS PVIAFA 
Sbjct: 89  TQLRKNDTAFILCPNSIKVPILYFSLLSLGVVISPANLISTESEISHQISLSSPVIAFAI 148

Query: 156 VATCHKITNLRYRTILIDSPEFESMM-----KSTASREVEHVEVNQFDVAAVMYSSG 1
             TCHK+  L+Y TILIDSPEF+S++      +T  +++E V VNQ D+AA+M+SSG
Sbjct: 149 SKTCHKLPKLKYGTILIDSPEFDSIITMSPATTTTRQDLEKVTVNQSDLAAIMFSSG 205


>gb|AGE10622.1| 4-coumarate CoA ligase, partial [Lonicera macranthoides]
          Length = 162

 Score =  176 bits (445), Expect = 2e-42
 Identities = 92/136 (67%), Positives = 110/136 (80%)
 Frame = -3

Query: 513 VPLPPETTPLSATSYSLSLQLTSPWPDSTALIDSATGERVSYSEFTRLTKNLASYLQNLI 334
           +PLPPET  +S+ +YSLSLQLTSPWPDST+LIDSATG+R+SYS+FT  T NL+S LQ+ +
Sbjct: 27  LPLPPETALISSATYSLSLQLTSPWPDSTSLIDSATGQRLSYSQFTTQTNNLSSSLQSRL 86

Query: 333 GLCYH*RTIRTAPNSTRIAILYFSLLSLGVIISPSNPISTEPDISRQIKLSQPVIAFATV 154
           GL         +PNS +I +LYFSLLSLGVIISPSNP STE +ISRQIKLS+PVIAFAT 
Sbjct: 87  GLSKGDVAFILSPNSLQIPLLYFSLLSLGVIISPSNPSSTESEISRQIKLSKPVIAFATS 146

Query: 153 ATCHKITNLRYRTILI 106
           AT HKI  LR+ T+LI
Sbjct: 147 ATSHKIPALRHGTVLI 162


>emb|CBI40068.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score =  163 bits (413), Expect = 1e-38
 Identities = 87/171 (50%), Positives = 120/171 (70%)
 Frame = -3

Query: 513 VPLPPETTPLSATSYSLSLQLTSPWPDSTALIDSATGERVSYSEFTRLTKNLASYLQNLI 334
           V LPPE   LSA +Y+ SL+  SP  DS  +I+S TG+R+SYSEF R +K LA+YLQ+++
Sbjct: 79  VQLPPENVLLSADAYTYSLRAPSPGDDSPVIINSTTGQRLSYSEFVRRSKTLAAYLQSIV 138

Query: 333 GLCYH*RTIRTAPNSTRIAILYFSLLSLGVIISPSNPISTEPDISRQIKLSQPVIAFATV 154
           GL         + N  ++ +LYF+LLSLGV++SP+NPI+T+ +++RQ +L +PVIAF   
Sbjct: 139 GLNKGDAAYILSNNLIQVPVLYFALLSLGVVVSPANPINTKAEVARQTQLCRPVIAFTIS 198

Query: 153 ATCHKITNLRYRTILIDSPEFESMMKSTASREVEHVEVNQFDVAAVMYSSG 1
              HKI  LRY TI+IDS EFE MM S   RE+  V+V+Q D+A +MYSSG
Sbjct: 199 TAVHKIPKLRYGTIVIDSFEFELMMTS-PRREMVDVKVSQSDLAGIMYSSG 248


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