BLASTX nr result

ID: Panax21_contig00032787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032787
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE10595.1| 4-coumarate CoA ligase [Lonicera japonica]             183   1e-44
ref|XP_002327954.1| 4-coumarate-coa ligase [Populus trichocarpa]...   169   2e-40
ref|XP_002336775.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-39
ref|XP_002509558.1| AMP dependent CoA ligase, putative [Ricinus ...   161   5e-38
ref|XP_002315623.1| acyl:coa ligase [Populus trichocarpa] gi|222...   159   2e-37

>gb|AGE10595.1| 4-coumarate CoA ligase [Lonicera japonica]
          Length = 540

 Score =  183 bits (465), Expect = 1e-44
 Identities = 100/146 (68%), Positives = 117/146 (80%)
 Frame = -2

Query: 438 PHSTAIIDSATGERVSYSEFTHLTKNLASYL*NLIGLCKGQTAFILSPNSTRIPILYFSL 259
           P ST +IDSATG+R+SYS+FT  T NL+S L + +GL KG  AFILS NS +IP+LYFSL
Sbjct: 49  PDSTXLIDSATGQRLSYSQFTTQTNNLSSSLQSHLGLSKGDVAFILSLNSLQIPLLYFSL 108

Query: 258 LSLGVIISPSNPISTESDISHQIKLSQPVIAFATVAT*HKITNLRYQTILIDSPEFESMM 79
           LSLGVIISPSNP STES+IS QIKLS+PVIAFAT AT HKI  LR+ T+LIDSPEF SM 
Sbjct: 109 LSLGVIISPSNPSSTESEISRQIKLSKPVIAFATSATSHKIPALRHGTVLIDSPEFVSMT 168

Query: 78  KSTASRELEHVEVNQCDVGAVMYSSG 1
            S + REL  V V+QCD+ A+MYSSG
Sbjct: 169 TS-SGRELSCVGVSQCDIAAIMYSSG 193


>ref|XP_002327954.1| 4-coumarate-coa ligase [Populus trichocarpa]
           gi|224133074|ref|XP_002327955.1| acyl:coa ligase
           [Populus trichocarpa] gi|222837363|gb|EEE75742.1|
           4-coumarate-coa ligase [Populus trichocarpa]
           gi|222837364|gb|EEE75743.1| acyl:coa ligase [Populus
           trichocarpa]
          Length = 548

 Score =  169 bits (429), Expect = 2e-40
 Identities = 90/156 (57%), Positives = 116/156 (74%), Gaps = 5/156 (3%)
 Frame = -2

Query: 453 SHQKPPHSTAIIDSATGERVSYSEFTHLTKNLASYL*NLIGLCKGQTAFILSPNSTRIPI 274
           +H   P S AII+S+T +++SYS+F    K+L  YL N+  L K  TAFIL PNS ++PI
Sbjct: 50  NHSPWPDSLAIINSSTSQKLSYSDFIERIKSLTLYLQNVTQLRKNDTAFILCPNSIQVPI 109

Query: 273 LYFSLLSLGVIISPSNPISTESDISHQIKLSQPVIAFATVAT*HKITNLRYQTILIDSPE 94
           LYFSLLSLGV+ISP+NPISTES+ISHQI LS PVIAFA   T HK+  L++ TILIDSPE
Sbjct: 110 LYFSLLSLGVVISPANPISTESEISHQISLSNPVIAFAISKTCHKLPKLKHGTILIDSPE 169

Query: 93  FESMM-----KSTASRELEHVEVNQCDVGAVMYSSG 1
           F+S++      +TA ++LE V VNQ D+ A+M+SSG
Sbjct: 170 FDSIITMSPATTTARQDLEKVTVNQSDLAAIMFSSG 205


>ref|XP_002336775.1| predicted protein [Populus trichocarpa] gi|222836688|gb|EEE75081.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  166 bits (421), Expect = 1e-39
 Identities = 89/156 (57%), Positives = 114/156 (73%), Gaps = 5/156 (3%)
 Frame = -2

Query: 453 SHQKPPHSTAIIDSATGERVSYSEFTHLTKNLASYL*NLIGLCKGQTAFILSPNSTRIPI 274
           +H   P S AII+S+T +++SYS+F    K+L  YL N+  L K  TAFIL PNS ++PI
Sbjct: 50  NHSPWPDSLAIINSSTSQKLSYSDFIERIKSLTLYLQNVTQLRKNDTAFILCPNSIKVPI 109

Query: 273 LYFSLLSLGVIISPSNPISTESDISHQIKLSQPVIAFATVAT*HKITNLRYQTILIDSPE 94
           LYFSLLSLGV+ISP+N ISTES+ISHQI LS PVIAFA   T HK+  L+Y TILIDSPE
Sbjct: 110 LYFSLLSLGVVISPANLISTESEISHQISLSSPVIAFAISKTCHKLPKLKYGTILIDSPE 169

Query: 93  FESMM-----KSTASRELEHVEVNQCDVGAVMYSSG 1
           F+S++      +T  ++LE V VNQ D+ A+M+SSG
Sbjct: 170 FDSIITMSPATTTTRQDLEKVTVNQSDLAAIMFSSG 205


>ref|XP_002509558.1| AMP dependent CoA ligase, putative [Ricinus communis]
           gi|223549457|gb|EEF50945.1| AMP dependent CoA ligase,
           putative [Ricinus communis]
          Length = 540

 Score =  161 bits (408), Expect = 5e-38
 Identities = 85/145 (58%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
 Frame = -2

Query: 432 STAIIDSATGERVSYSEFTHLTKNLASYL*NLIGLCKGQTAFILSPNSTRIPILYFSLLS 253
           S A+IDS++G  +SYS+F   TK+L  YL N+I L K   AF+L P ST+IPILYFSLLS
Sbjct: 53  SLALIDSSSGHGISYSDFYLFTKSLTCYLHNVIKLSKNDVAFVLCPKSTKIPILYFSLLS 112

Query: 252 LGVIISPSNPISTESDISHQIKLSQPVIAFATVAT*HKITNLRYQTILIDSPEFESMM-K 76
           LGVIISPSNP++TE +IS QI LS+PVIAFAT +T HKI  L ++TIL+DSPEF S++  
Sbjct: 113 LGVIISPSNPLNTELEISRQISLSKPVIAFATSSTAHKIPKLNHKTILLDSPEFNSILTT 172

Query: 75  STASRELEHVEVNQCDVGAVMYSSG 1
           S  + EL+ V V Q D+  + YSSG
Sbjct: 173 SCPTHELDKVTVRQSDLAGIFYSSG 197


>ref|XP_002315623.1| acyl:coa ligase [Populus trichocarpa] gi|222864663|gb|EEF01794.1|
           acyl:coa ligase [Populus trichocarpa]
          Length = 552

 Score =  159 bits (402), Expect = 2e-37
 Identities = 86/154 (55%), Positives = 104/154 (67%), Gaps = 3/154 (1%)
 Frame = -2

Query: 453 SHQKPPHSTAIIDSATGERVSYSEFTHLTKNLASYL*NLIGLCKGQTAFILSPNSTRIPI 274
           S   PP +TA++D+ TG R+S+ E  H T+ LAS L N   L KG TAFILSPNS  IPI
Sbjct: 51  SFPSPPQTTALLDAVTGRRISFPELIHFTETLASSLLNRFRLKKGDTAFILSPNSIHIPI 110

Query: 273 LYFSLLSLGVIISPSNPISTESDISHQIKLSQPVIAFATVAT*HKITNLRYQTILIDSPE 94
           LY SL +LGV+ISPSNP+S+E +I HQ  LS+PVIAF T  T HKI     +TIL+DSPE
Sbjct: 111 LYLSLFTLGVVISPSNPLSSEQEILHQTNLSKPVIAFVTSQTAHKIPYSVKKTILLDSPE 170

Query: 93  FESMMKSTAS---RELEHVEVNQCDVGAVMYSSG 1
           FES+M S        LE V V Q D  A++YSSG
Sbjct: 171 FESLMTSQTQGTVNGLERVRVYQSDPAAILYSSG 204


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