BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032775
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515531.1| pentatricopeptide repeat-containing protein,...   335   3e-90
ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containi...   329   2e-88
ref|XP_002308660.1| predicted protein [Populus trichocarpa] gi|2...   319   3e-85
ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containi...   315   4e-84
ref|XP_003588753.1| Pentatricopeptide repeat-containing protein ...   300   1e-79

>ref|XP_002515531.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545475|gb|EEF46980.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 397

 Score =  335 bits (860), Expect = 3e-90
 Identities = 164/204 (80%), Positives = 180/204 (88%), Gaps = 1/204 (0%)
 Frame = -1

Query: 610 HNVMPNKFTYPFVLKACAGIGKLNLGKQVHGSVIKIGFDDDIHVQNTMVHMYCCCSGGIE 431
           ++V+PNKFTYPFVLKACAGIG LNLGK VHGSV+K GFD+D+HVQNTMVHMYCC   GIE
Sbjct: 130 YDVLPNKFTYPFVLKACAGIGYLNLGKSVHGSVLKFGFDNDVHVQNTMVHMYCCGRDGIE 189

Query: 430 FARMVFDEMPKSDSVTWSAMIGGYARLGMSTDAIELFRNMQTAGVC-ADKITMVSLLSAC 254
           FAR VFDEM K D V+WSAMIGGYARLG  +DAI+LFR MQ  GVC  D+ITMVS+LSAC
Sbjct: 190 FAREVFDEMCKRDPVSWSAMIGGYARLGRCSDAIDLFREMQIEGVCRPDEITMVSVLSAC 249

Query: 253 TDLGALELGEWVESYIEREKVQKSVELCNALIDMFAKCGDVDKELRLFRNMSDRTIVTWT 74
           TDLGALELG+WVESYIE+EKVQKSVELCNALIDMFAKCGDVDK ++LFRNM DRTIV+WT
Sbjct: 250 TDLGALELGKWVESYIEKEKVQKSVELCNALIDMFAKCGDVDKAIKLFRNMKDRTIVSWT 309

Query: 73  SVIDGTAMHGRGLEAVSLFEEMKK 2
           SVI G AMHGRGLEAV  FEEM K
Sbjct: 310 SVIAGLAMHGRGLEAVEFFEEMIK 333



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 40/124 (32%), Positives = 64/124 (51%)
 Frame = -1

Query: 598 PNKFTYPFVLKACAGIGKLNLGKQVHGSVIKIGFDDDIHVQNTMVHMYCCCSGGIEFARM 419
           P++ T   VL AC  +G L LGK V   + K      + + N ++ M+  C G ++ A  
Sbjct: 237 PDEITMVSVLSACTDLGALELGKWVESYIEKEKVQKSVELCNALIDMFAKC-GDVDKAIK 295

Query: 418 VFDEMPKSDSVTWSAMIGGYARLGMSTDAIELFRNMQTAGVCADKITMVSLLSACTDLGA 239
           +F  M     V+W+++I G A  G   +A+E F  M  +GV  D +  + LLSAC+  G 
Sbjct: 296 LFRNMKDRTIVSWTSVIAGLAMHGRGLEAVEFFEEMIKSGVLPDDVAFIGLLSACSHSGL 355

Query: 238 LELG 227
           ++ G
Sbjct: 356 VDKG 359


>ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
           gi|296082021|emb|CBI21026.3| unnamed protein product
           [Vitis vinifera]
          Length = 583

 Score =  329 bits (844), Expect = 2e-88
 Identities = 156/202 (77%), Positives = 176/202 (87%)
 Frame = -1

Query: 610 HNVMPNKFTYPFVLKACAGIGKLNLGKQVHGSVIKIGFDDDIHVQNTMVHMYCCCSGGIE 431
           + + PNK+ +PFVLKACAG+  LNLGK VHGS++K GFDDDI VQNTMVHMYCCCSGG+E
Sbjct: 103 YGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGME 162

Query: 430 FARMVFDEMPKSDSVTWSAMIGGYARLGMSTDAIELFRNMQTAGVCADKITMVSLLSACT 251
           FAR +FDEMPK D VTW+AMIGGYARLG S  A+ LFR MQ AGVC D +TMVS+LSACT
Sbjct: 163 FARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACT 222

Query: 250 DLGALELGEWVESYIEREKVQKSVELCNALIDMFAKCGDVDKELRLFRNMSDRTIVTWTS 71
           DLGALELG+W+ESYIE+E+V K+VEL NAL+DMFAKCGDVDK L LFRNMS RTIV+WTS
Sbjct: 223 DLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTS 282

Query: 70  VIDGTAMHGRGLEAVSLFEEMK 5
           VI G AMHGRGLEAVSLFEEMK
Sbjct: 283 VIVGLAMHGRGLEAVSLFEEMK 304



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
 Frame = -1

Query: 604 VMPNKFTYPFVLKACAGIGKLNLGKQVHGSVIKIGFDDDIHVQNTMVHMYCCCSGGIEFA 425
           V P+  T   VL AC  +G L LGK +   + K      + + N +V M+  C G ++ A
Sbjct: 207 VCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKC-GDVDKA 265

Query: 424 RMVFDEMPKSDSVTWSAMIGGYARLGMSTDAIELFRNMQTAGVCADKITMVSLLSACTDL 245
             +F  M K   V+W+++I G A  G   +A+ LF  M+ +G+  + I  + LLSAC+  
Sbjct: 266 LGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHS 325

Query: 244 GALELGEWVESYIERE-KVQKSVELCNALIDMFAKCGDVDKELRLFRNMS-DRTIVTWTS 71
           G +E G    S + R+  +   +E    ++D+ ++ G V + L     M  +   + W +
Sbjct: 326 GLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRT 385

Query: 70  VIDGTAMHG 44
           +I    +HG
Sbjct: 386 LISACRVHG 394


>ref|XP_002308660.1| predicted protein [Populus trichocarpa] gi|222854636|gb|EEE92183.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  319 bits (817), Expect = 3e-85
 Identities = 153/201 (76%), Positives = 175/201 (87%), Gaps = 3/201 (1%)
 Frame = -1

Query: 601 MPNKFTYPFVLKACAGIGKLNLGKQVHGSVIKIGFDDDIHVQNTMVHMYCCC---SGGIE 431
           +PNKFTYPFVLKACAGIG LNLGK VHGSV+K GF D+++VQNT+VHMYCCC    GGIE
Sbjct: 7   LPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIE 66

Query: 430 FARMVFDEMPKSDSVTWSAMIGGYARLGMSTDAIELFRNMQTAGVCADKITMVSLLSACT 251
           FAR VFDEM KSDSV+WSAMIGGY R+G S+DAI LFR MQ  GVC D+ITMVS+LSACT
Sbjct: 67  FARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACT 126

Query: 250 DLGALELGEWVESYIEREKVQKSVELCNALIDMFAKCGDVDKELRLFRNMSDRTIVTWTS 71
            LGALELG+WVESY+E+E+VQK+VEL NALIDMFAKCGDVDK   LFR+M +R IV+WTS
Sbjct: 127 GLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTS 186

Query: 70  VIDGTAMHGRGLEAVSLFEEM 8
           VI G AMHGRG+EAV++FEEM
Sbjct: 187 VIGGLAMHGRGVEAVAVFEEM 207



 Score =  101 bits (252), Expect = 9e-20
 Identities = 57/189 (30%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
 Frame = -1

Query: 604 VMPNKFTYPFVLKACAGIGKLNLGKQVHGSVIKIGFDDDIHVQNTMVHMYCCCSGGIEFA 425
           V P++ T   VL AC G+G L LGK V   V K     ++ + N ++ M+  C G ++ A
Sbjct: 111 VCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKC-GDVDKA 169

Query: 424 RMVFDEMPKSDSVTWSAMIGGYARLGMSTDAIELFRNMQTAGVCADKITMVSLLSACTDL 245
             +F  M + + V+W+++IGG A  G   +A+ +F  M  +GV  D +  + LLSAC+  
Sbjct: 170 TNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHS 229

Query: 244 GALELGE-WVESYIEREKVQKSVELCNALIDMFAKCGDVDKELRLFRNMS-DRTIVTWTS 71
           G ++ G+ + +S  +   +   +E    ++DM  + G V + L+  + M  D   V W +
Sbjct: 230 GLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRT 289

Query: 70  VIDGTAMHG 44
           +I+    HG
Sbjct: 290 LINACRAHG 298


>ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
           gi|449529652|ref|XP_004171812.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 606

 Score =  315 bits (807), Expect = 4e-84
 Identities = 149/199 (74%), Positives = 172/199 (86%)
 Frame = -1

Query: 604 VMPNKFTYPFVLKACAGIGKLNLGKQVHGSVIKIGFDDDIHVQNTMVHMYCCCSGGIEFA 425
           ++PNKFTYPFVLKACAG+  LNLG+ VHGSV+K GFD DIHVQNTMVHMY CC+GGI  A
Sbjct: 128 ILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSA 187

Query: 424 RMVFDEMPKSDSVTWSAMIGGYARLGMSTDAIELFRNMQTAGVCADKITMVSLLSACTDL 245
           R VFDEMPKSDSVTWSAMIGGYAR+G ST+A+ LFR MQ A VC D+ITMVS+LSACTDL
Sbjct: 188 RKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDL 247

Query: 244 GALELGEWVESYIEREKVQKSVELCNALIDMFAKCGDVDKELRLFRNMSDRTIVTWTSVI 65
           GALELG+W+E+YIER ++ K VE+ NALIDMFAKCGD+ K L+LFR M+++TIV+WTSVI
Sbjct: 248 GALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVI 307

Query: 64  DGTAMHGRGLEAVSLFEEM 8
            G AMHGRG EA  LFEEM
Sbjct: 308 VGMAMHGRGQEATCLFEEM 326



 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
 Frame = -1

Query: 604 VMPNKFTYPFVLKACAGIGKLNLGKQVHGSVIKIGFDDDIHVQNTMVHMYCCCSGGIEFA 425
           V P++ T   +L AC  +G L LGK +   + +      + V N ++ M+  C G I  A
Sbjct: 230 VCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKC-GDISKA 288

Query: 424 RMVFDEMPKSDSVTWSAMIGGYARLGMSTDAIELFRNMQTAGVCADKITMVSLLSACTDL 245
             +F  M +   V+W+++I G A  G   +A  LF  M ++GV  D +  + LLSAC+  
Sbjct: 289 LKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHS 348

Query: 244 GALELG-EWVESYIEREKVQKSVELCNALIDMFAKCGDVDKELRLFRNM 101
           G +E G E+  S +++ K+   +E    ++DM+ + G V + L   RNM
Sbjct: 349 GLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNM 397



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
 Frame = -1

Query: 574 VLKACAGIGKLNLGKQVHGSVIKIGFDDDIHVQNTMVHMYCCCSGGIEFARMVFDEMPKS 395
           +L+AC  + KL    Q+H  ++K+G  ++  V      +          A  +F     +
Sbjct: 35  LLQACNALPKLT---QIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEADT 91

Query: 394 ---DSVTWSAMIGGYARLGMSTD-AIELFRNMQTAGVCADKITMVSLLSACTDLGALELG 227
              D+  ++ +I  YA+ G S D A+ L+  M    +  +K T   +L AC  L  L LG
Sbjct: 92  RLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLG 151

Query: 226 EWVESYIEREKVQKSVELCNALIDMFAKC-GDVDKELRLFRNMSDRTIVTWTSVIDGTAM 50
           + V   + +      + + N ++ M++ C G ++   ++F  M     VTW+++I G A 
Sbjct: 152 QTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYAR 211

Query: 49  HGRGLEAVSLFEEMK 5
            GR  EAV+LF EM+
Sbjct: 212 VGRSTEAVALFREMQ 226


>ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477801|gb|AES59004.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 600

 Score =  300 bits (769), Expect = 1e-79
 Identities = 140/202 (69%), Positives = 167/202 (82%), Gaps = 1/202 (0%)
 Frame = -1

Query: 610 HNVMPNKFTYPFVLKACAGIGKLNLGKQVHGSVIKIGFDDDIHVQNTMVHMYCCCS-GGI 434
           + V PNKFT+PFVLK CAGIG L LGK VHG V+K GF++D+HV NT++HMYCC    G 
Sbjct: 119 YGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGF 178

Query: 433 EFARMVFDEMPKSDSVTWSAMIGGYARLGMSTDAIELFRNMQTAGVCADKITMVSLLSAC 254
           EFA  VFD+ PK D+VTWSAMI G+ RLG S+ A++LFR MQ  GVC D+ITMVS+LSAC
Sbjct: 179 EFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSAC 238

Query: 253 TDLGALELGEWVESYIEREKVQKSVELCNALIDMFAKCGDVDKELRLFRNMSDRTIVTWT 74
            DLGALELG+WVESY+E++ + KSVELCNALIDMFAKCG+VDK ++LFR M  RTIV+WT
Sbjct: 239 ADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWT 298

Query: 73  SVIDGTAMHGRGLEAVSLFEEM 8
           SVI G AMHGRGL+AVSLF+EM
Sbjct: 299 SVIAGLAMHGRGLDAVSLFDEM 320



 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 2/191 (1%)
 Frame = -1

Query: 604 VMPNKFTYPFVLKACAGIGKLNLGKQVHGSVIKIGFDDDIHVQNTMVHMYCCCSGGIEFA 425
           V P++ T   VL ACA +G L LGK V   V K      + + N ++ M+  C G ++ A
Sbjct: 224 VCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKC-GNVDKA 282

Query: 424 RMVFDEMPKSDSVTWSAMIGGYARLGMSTDAIELFRNMQTAGVCADKITMVSLLSACTDL 245
             +F +M     V+W+++I G A  G   DA+ LF  M   G+  D +  + +LSAC+  
Sbjct: 283 IKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHS 342

Query: 244 GALELGEWVESYIERE-KVQKSVELCNALIDMFAKCGDVDKELRLFRNMS-DRTIVTWTS 71
           G ++ G +    +ER   +   VE    ++D+  + G V +     + M  +   + W +
Sbjct: 343 GLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRT 402

Query: 70  VIDGTAMHGRG 38
           +I  TA H  G
Sbjct: 403 II--TACHATG 411