BLASTX nr result
ID: Panax21_contig00032768
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00032768 (418 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi... 225 2e-57 ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 212 3e-53 ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containi... 212 3e-53 ref|XP_002525211.1| pentatricopeptide repeat-containing protein,... 207 9e-52 ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|2... 204 5e-51 >ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37310-like [Vitis vinifera] Length = 667 Score = 225 bits (574), Expect = 2e-57 Identities = 108/139 (77%), Positives = 122/139 (87%) Frame = +2 Query: 2 AKLGFLHGAETVFDRSKDRSVIVWTSIISAYAAHGDVDAVLHLFENMLNDGLQPDPVTFT 181 AKLGFL GA+ VFD+SKDRS+IVWT+IISAY+AHGD +A L LF +ML++G QPDPVTFT Sbjct: 419 AKLGFLRGAQWVFDQSKDRSLIVWTAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFT 478 Query: 182 AVLAACAHSGVVNEAWRIFDSMHPKYGIQPLAEHYSCMVGVLSRAGKLSEAAEFINKMPV 361 AVLAACAHSG+VNEAW+IFD M KYG QP EHY+CMVGVLSRAG LSEAAEFI KMP+ Sbjct: 479 AVLAACAHSGMVNEAWKIFDEMFLKYGFQPCVEHYACMVGVLSRAGMLSEAAEFICKMPI 538 Query: 362 EPSAKAWGALLNGASVSGD 418 EP+AK WGALLNG SVSGD Sbjct: 539 EPNAKVWGALLNGVSVSGD 557 Score = 60.1 bits (144), Expect = 2e-07 Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 1/131 (0%) Frame = +2 Query: 26 AETVFDRSKDRSVIVWTSIISAYAAHGDVDAVLHLFENMLND-GLQPDPVTFTAVLAACA 202 A +FDR DR ++ W S+I+ Y+ G + L+ ML+ GL+P+ VT +VL ACA Sbjct: 193 ARILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACA 252 Query: 203 HSGVVNEAWRIFDSMHPKYGIQPLAEHYSCMVGVLSRAGKLSEAAEFINKMPVEPSAKAW 382 + + ++ + + ++ H S ++G+ ++ G L A E N+M + + Sbjct: 253 QTNDLVFGMKVHQFIIERKVEMDVSAHNS-LIGLYAKCGSLDYARELFNEMSNKDEV-TY 310 Query: 383 GALLNGASVSG 415 G++++G G Sbjct: 311 GSIVSGYMTHG 321 >ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g37310-like [Cucumis sativus] Length = 635 Score = 212 bits (539), Expect = 3e-53 Identities = 99/139 (71%), Positives = 119/139 (85%) Frame = +2 Query: 2 AKLGFLHGAETVFDRSKDRSVIVWTSIISAYAAHGDVDAVLHLFENMLNDGLQPDPVTFT 181 AK G+LHGA+ VFD+ K RS+I WTSIISAYA HGD + L LF ML +G+QPD VTFT Sbjct: 388 AKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFT 447 Query: 182 AVLAACAHSGVVNEAWRIFDSMHPKYGIQPLAEHYSCMVGVLSRAGKLSEAAEFINKMPV 361 +VLAACAHSG ++EAW+IF+ + P+YGIQPL EHY+CMVGVLSRAGKLS+A EFI+KMP+ Sbjct: 448 SVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFISKMPL 507 Query: 362 EPSAKAWGALLNGASVSGD 418 EP+AK WGALLNGASV+GD Sbjct: 508 EPTAKVWGALLNGASVAGD 526 >ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37310-like [Cucumis sativus] Length = 595 Score = 212 bits (539), Expect = 3e-53 Identities = 99/139 (71%), Positives = 119/139 (85%) Frame = +2 Query: 2 AKLGFLHGAETVFDRSKDRSVIVWTSIISAYAAHGDVDAVLHLFENMLNDGLQPDPVTFT 181 AK G+LHGA+ VFD+ K RS+I WTSIISAYA HGD + L LF ML +G+QPD VTFT Sbjct: 388 AKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFT 447 Query: 182 AVLAACAHSGVVNEAWRIFDSMHPKYGIQPLAEHYSCMVGVLSRAGKLSEAAEFINKMPV 361 +VLAACAHSG ++EAW+IF+ + P+YGIQPL EHY+CMVGVLSRAGKLS+A EFI+KMP+ Sbjct: 448 SVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFISKMPL 507 Query: 362 EPSAKAWGALLNGASVSGD 418 EP+AK WGALLNGASV+GD Sbjct: 508 EPTAKVWGALLNGASVAGD 526 >ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 654 Score = 207 bits (526), Expect = 9e-52 Identities = 94/139 (67%), Positives = 116/139 (83%) Frame = +2 Query: 2 AKLGFLHGAETVFDRSKDRSVIVWTSIISAYAAHGDVDAVLHLFENMLNDGLQPDPVTFT 181 AK G+L GA+ VFD+SKDRS+++WT+IISAYA HGD + L LF ML G+QPDPVTFT Sbjct: 406 AKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPDPVTFT 465 Query: 182 AVLAACAHSGVVNEAWRIFDSMHPKYGIQPLAEHYSCMVGVLSRAGKLSEAAEFINKMPV 361 AVLAACAH G+V++AW IF+SM KYGIQPL EHY+C+VG L +A +LSEA EF++KMP+ Sbjct: 466 AVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKARRLSEAKEFVSKMPI 525 Query: 362 EPSAKAWGALLNGASVSGD 418 EPSAK WGALL+GAS+S D Sbjct: 526 EPSAKVWGALLHGASISSD 544 >ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|222854472|gb|EEE92019.1| predicted protein [Populus trichocarpa] Length = 621 Score = 204 bits (520), Expect = 5e-51 Identities = 95/139 (68%), Positives = 120/139 (86%) Frame = +2 Query: 2 AKLGFLHGAETVFDRSKDRSVIVWTSIISAYAAHGDVDAVLHLFENMLNDGLQPDPVTFT 181 AKLGFL GA+ VFD+SK+RS+I+WT+IISA+AAHGD ++ L F+ ML++G+QPD VTFT Sbjct: 404 AKLGFLFGAQYVFDQSKERSLIIWTAIISAHAAHGDANSALTFFDEMLSNGIQPDHVTFT 463 Query: 182 AVLAACAHSGVVNEAWRIFDSMHPKYGIQPLAEHYSCMVGVLSRAGKLSEAAEFINKMPV 361 AVLAACAH G+V++AW IF+SM KYGIQPL EHY+CMVGVL RAG+LS+A EFI+ MP+ Sbjct: 464 AVLAACAHCGMVDKAWEIFNSMSKKYGIQPLGEHYACMVGVLGRAGRLSQATEFISTMPI 523 Query: 362 EPSAKAWGALLNGASVSGD 418 EP+AK WGALL+GAS+ D Sbjct: 524 EPNAKVWGALLHGASLCVD 542