BLASTX nr result

ID: Panax21_contig00032768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032768
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi...   225   2e-57
ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   212   3e-53
ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containi...   212   3e-53
ref|XP_002525211.1| pentatricopeptide repeat-containing protein,...   207   9e-52
ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|2...   204   5e-51

>ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Vitis vinifera]
          Length = 667

 Score =  225 bits (574), Expect = 2e-57
 Identities = 108/139 (77%), Positives = 122/139 (87%)
 Frame = +2

Query: 2   AKLGFLHGAETVFDRSKDRSVIVWTSIISAYAAHGDVDAVLHLFENMLNDGLQPDPVTFT 181
           AKLGFL GA+ VFD+SKDRS+IVWT+IISAY+AHGD +A L LF +ML++G QPDPVTFT
Sbjct: 419 AKLGFLRGAQWVFDQSKDRSLIVWTAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFT 478

Query: 182 AVLAACAHSGVVNEAWRIFDSMHPKYGIQPLAEHYSCMVGVLSRAGKLSEAAEFINKMPV 361
           AVLAACAHSG+VNEAW+IFD M  KYG QP  EHY+CMVGVLSRAG LSEAAEFI KMP+
Sbjct: 479 AVLAACAHSGMVNEAWKIFDEMFLKYGFQPCVEHYACMVGVLSRAGMLSEAAEFICKMPI 538

Query: 362 EPSAKAWGALLNGASVSGD 418
           EP+AK WGALLNG SVSGD
Sbjct: 539 EPNAKVWGALLNGVSVSGD 557



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
 Frame = +2

Query: 26  AETVFDRSKDRSVIVWTSIISAYAAHGDVDAVLHLFENMLND-GLQPDPVTFTAVLAACA 202
           A  +FDR  DR ++ W S+I+ Y+  G  +    L+  ML+  GL+P+ VT  +VL ACA
Sbjct: 193 ARILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACA 252

Query: 203 HSGVVNEAWRIFDSMHPKYGIQPLAEHYSCMVGVLSRAGKLSEAAEFINKMPVEPSAKAW 382
            +  +    ++   +  +     ++ H S ++G+ ++ G L  A E  N+M  +     +
Sbjct: 253 QTNDLVFGMKVHQFIIERKVEMDVSAHNS-LIGLYAKCGSLDYARELFNEMSNKDEV-TY 310

Query: 383 GALLNGASVSG 415
           G++++G    G
Sbjct: 311 GSIVSGYMTHG 321


>ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g37310-like [Cucumis sativus]
          Length = 635

 Score =  212 bits (539), Expect = 3e-53
 Identities = 99/139 (71%), Positives = 119/139 (85%)
 Frame = +2

Query: 2   AKLGFLHGAETVFDRSKDRSVIVWTSIISAYAAHGDVDAVLHLFENMLNDGLQPDPVTFT 181
           AK G+LHGA+ VFD+ K RS+I WTSIISAYA HGD +  L LF  ML +G+QPD VTFT
Sbjct: 388 AKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFT 447

Query: 182 AVLAACAHSGVVNEAWRIFDSMHPKYGIQPLAEHYSCMVGVLSRAGKLSEAAEFINKMPV 361
           +VLAACAHSG ++EAW+IF+ + P+YGIQPL EHY+CMVGVLSRAGKLS+A EFI+KMP+
Sbjct: 448 SVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFISKMPL 507

Query: 362 EPSAKAWGALLNGASVSGD 418
           EP+AK WGALLNGASV+GD
Sbjct: 508 EPTAKVWGALLNGASVAGD 526


>ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Cucumis sativus]
          Length = 595

 Score =  212 bits (539), Expect = 3e-53
 Identities = 99/139 (71%), Positives = 119/139 (85%)
 Frame = +2

Query: 2   AKLGFLHGAETVFDRSKDRSVIVWTSIISAYAAHGDVDAVLHLFENMLNDGLQPDPVTFT 181
           AK G+LHGA+ VFD+ K RS+I WTSIISAYA HGD +  L LF  ML +G+QPD VTFT
Sbjct: 388 AKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFT 447

Query: 182 AVLAACAHSGVVNEAWRIFDSMHPKYGIQPLAEHYSCMVGVLSRAGKLSEAAEFINKMPV 361
           +VLAACAHSG ++EAW+IF+ + P+YGIQPL EHY+CMVGVLSRAGKLS+A EFI+KMP+
Sbjct: 448 SVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFISKMPL 507

Query: 362 EPSAKAWGALLNGASVSGD 418
           EP+AK WGALLNGASV+GD
Sbjct: 508 EPTAKVWGALLNGASVAGD 526


>ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535508|gb|EEF37177.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  207 bits (526), Expect = 9e-52
 Identities = 94/139 (67%), Positives = 116/139 (83%)
 Frame = +2

Query: 2   AKLGFLHGAETVFDRSKDRSVIVWTSIISAYAAHGDVDAVLHLFENMLNDGLQPDPVTFT 181
           AK G+L GA+ VFD+SKDRS+++WT+IISAYA HGD +  L LF  ML  G+QPDPVTFT
Sbjct: 406 AKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPDPVTFT 465

Query: 182 AVLAACAHSGVVNEAWRIFDSMHPKYGIQPLAEHYSCMVGVLSRAGKLSEAAEFINKMPV 361
           AVLAACAH G+V++AW IF+SM  KYGIQPL EHY+C+VG L +A +LSEA EF++KMP+
Sbjct: 466 AVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKARRLSEAKEFVSKMPI 525

Query: 362 EPSAKAWGALLNGASVSGD 418
           EPSAK WGALL+GAS+S D
Sbjct: 526 EPSAKVWGALLHGASISSD 544


>ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|222854472|gb|EEE92019.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score =  204 bits (520), Expect = 5e-51
 Identities = 95/139 (68%), Positives = 120/139 (86%)
 Frame = +2

Query: 2   AKLGFLHGAETVFDRSKDRSVIVWTSIISAYAAHGDVDAVLHLFENMLNDGLQPDPVTFT 181
           AKLGFL GA+ VFD+SK+RS+I+WT+IISA+AAHGD ++ L  F+ ML++G+QPD VTFT
Sbjct: 404 AKLGFLFGAQYVFDQSKERSLIIWTAIISAHAAHGDANSALTFFDEMLSNGIQPDHVTFT 463

Query: 182 AVLAACAHSGVVNEAWRIFDSMHPKYGIQPLAEHYSCMVGVLSRAGKLSEAAEFINKMPV 361
           AVLAACAH G+V++AW IF+SM  KYGIQPL EHY+CMVGVL RAG+LS+A EFI+ MP+
Sbjct: 464 AVLAACAHCGMVDKAWEIFNSMSKKYGIQPLGEHYACMVGVLGRAGRLSQATEFISTMPI 523

Query: 362 EPSAKAWGALLNGASVSGD 418
           EP+AK WGALL+GAS+  D
Sbjct: 524 EPNAKVWGALLHGASLCVD 542


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