BLASTX nr result

ID: Panax21_contig00032751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032751
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   155   9e-36
ref|XP_002527112.1| pentatricopeptide repeat-containing protein,...   154   2e-35
ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containi...   153   3e-35
ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|2...   148   1e-33
ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containi...   139   8e-31

>ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  155 bits (392), Expect = 9e-36
 Identities = 75/111 (67%), Positives = 88/111 (79%)
 Frame = -3

Query: 337 LKPNEVTVLGTLSACSQLGAGQEGEKVYNYIICEKLDYNVQVCNAVIDMYAKCGLVDKFF 158
           L+PN VTV G L ACSQLGA +EGE V+ YI+ EKLD NVQVCN VIDMYAKCG +DK +
Sbjct: 201 LRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAY 260

Query: 157 WGFSNMSCKKSLVTWNTMIMALAMQGDGVKAL*LFERMGLADVVPESVSYL 5
           W F NM C KSL+TWNTMIMA AM GDG KAL LFE++G + + P++VSYL
Sbjct: 261 WVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYL 311


>ref|XP_002527112.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533535|gb|EEF35275.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 364

 Score =  154 bits (389), Expect = 2e-35
 Identities = 93/210 (44%), Positives = 116/210 (55%)
 Frame = -3

Query: 634 TIISANIKAQKFTQAQALFIAAPVKDSVTYNSMLCGYVNSDWCESEVVKLFLEMQSVRDE 455
           T++    K      AQ +F    VKD  ++N+++ G+   +   SE + LF  M+ +   
Sbjct: 143 TLLDLYAKTGDLDSAQKMFDEMIVKDIASWNALISGFAQGNK-PSEALGLFKRMEVL--- 198

Query: 454 VEIDEFTVTIMLNGFEAE*GYXXXXXXXXXXXXXXXXXXLKPNEVTVLGTLSACSQLGAG 275
                        GF                         KPNE+TVLG LSACSQLGA 
Sbjct: 199 -------------GF-------------------------KPNEITVLGALSACSQLGAF 220

Query: 274 QEGEKVYNYIICEKLDYNVQVCNAVIDMYAKCGLVDKFFWGFSNMSCKKSLVTWNTMIMA 95
           +EGEK++ YI  +KLD NVQVCNA IDMYAKCG  DK +  F +MSC KSLVTWNTMIMA
Sbjct: 221 KEGEKIHEYIRSQKLDMNVQVCNAAIDMYAKCGFADKAYLVFESMSCGKSLVTWNTMIMA 280

Query: 94  LAMQGDGVKAL*LFERMGLADVVPESVSYL 5
            AM GDG KAL LF+ M    V P++VSYL
Sbjct: 281 FAMHGDGDKALKLFKYMHQEGVSPDAVSYL 310


>ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  153 bits (387), Expect = 3e-35
 Identities = 74/111 (66%), Positives = 88/111 (79%)
 Frame = -3

Query: 337 LKPNEVTVLGTLSACSQLGAGQEGEKVYNYIICEKLDYNVQVCNAVIDMYAKCGLVDKFF 158
           L+PN VTV G L ACSQLGA +EGE V+ YI+ EKL+ NVQVCN VIDMYAKCG +DK +
Sbjct: 201 LRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAY 260

Query: 157 WGFSNMSCKKSLVTWNTMIMALAMQGDGVKAL*LFERMGLADVVPESVSYL 5
           W F NM C KSL+TWNTMIMA AM GDG KAL LFE++G + + P++VSYL
Sbjct: 261 WVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYL 311


>ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|222856179|gb|EEE93726.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  148 bits (373), Expect = 1e-33
 Identities = 70/110 (63%), Positives = 85/110 (77%)
 Frame = -3

Query: 334 KPNEVTVLGTLSACSQLGAGQEGEKVYNYIICEKLDYNVQVCNAVIDMYAKCGLVDKFFW 155
           KPNE++VLG LSAC+QLG  +EGEK++ YI  E+ D N QVCN VIDMYAKCG VDK + 
Sbjct: 203 KPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYL 262

Query: 154 GFSNMSCKKSLVTWNTMIMALAMQGDGVKAL*LFERMGLADVVPESVSYL 5
            F +MSC+K +VTWNTMIMA AM G+G KAL LFE+M  + V P+ VSYL
Sbjct: 263 VFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYL 312


>ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Vitis vinifera]
          Length = 573

 Score =  139 bits (349), Expect = 8e-31
 Identities = 85/210 (40%), Positives = 110/210 (52%)
 Frame = -3

Query: 634 TIISANIKAQKFTQAQALFIAAPVKDSVTYNSMLCGYVNSDWCESEVVKLFLEMQSVRDE 455
           T+I A  K      AQ +F   P++D   +N+++ G        SE + LF  M++  ++
Sbjct: 140 TLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSK-SSEALALFNRMRAEGEK 198

Query: 454 VEIDEFTVTIMLNGFEAE*GYXXXXXXXXXXXXXXXXXXLKPNEVTVLGTLSACSQLGAG 275
           +                                         NE++VLG L+ACSQLGA 
Sbjct: 199 I-----------------------------------------NEISVLGALAACSQLGAL 217

Query: 274 QEGEKVYNYIICEKLDYNVQVCNAVIDMYAKCGLVDKFFWGFSNMSCKKSLVTWNTMIMA 95
           + GE V+  +    LD NVQVCNAVIDMYAKCG  DK F  FS M+C KS+VTWNTMIMA
Sbjct: 218 RAGEGVHACVRKMDLDINVQVCNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMA 277

Query: 94  LAMQGDGVKAL*LFERMGLADVVPESVSYL 5
            AM GDG +AL LFE MG   V  +SV+YL
Sbjct: 278 FAMHGDGCRALELFEEMGKTQVEMDSVTYL 307


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