BLASTX nr result

ID: Panax21_contig00032747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032747
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|2...    98   2e-27
emb|CBI22055.3| unnamed protein product [Vitis vinifera]               97   2e-26
ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...    82   9e-22
ref|XP_002522593.1| conserved hypothetical protein [Ricinus comm...    68   2e-15
gb|EEC81533.1| hypothetical protein OsI_24939 [Oryza sativa Indi...    79   1e-14

>ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|222854808|gb|EEE92355.1|
            predicted protein [Populus trichocarpa]
          Length = 1476

 Score = 98.2 bits (243), Expect(2) = 2e-27
 Identities = 46/60 (76%), Positives = 52/60 (86%)
 Frame = -2

Query: 602  QTLCSEAKSLKQTVIASKIPATKRSMERFLFQLKAFLHTTASGCTFWMGNLKHKT*WGRL 423
            QTLCSEAK  KQT I SKIPATKRSMERFLF++KA LH+T+SGCTFWMGNLKHK   G++
Sbjct: 1379 QTLCSEAKGSKQTAITSKIPATKRSMERFLFRVKALLHSTSSGCTFWMGNLKHKDLTGQV 1438



 Score = 50.1 bits (118), Expect(2) = 2e-27
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = -1

Query: 441  DLMGQVVSSQPYIGDQDENIDDEPVDSVLSDQPATVANDEDSETE 307
            DL GQVVSSQ Y  DQ+ N+D++  ++V  DQP +VA+ ED ETE
Sbjct: 1433 DLTGQVVSSQAYADDQNNNVDEDLAEAVEEDQPVSVAS-EDRETE 1476


>emb|CBI22055.3| unnamed protein product [Vitis vinifera]
          Length = 1507

 Score = 97.4 bits (241), Expect(2) = 2e-26
 Identities = 46/60 (76%), Positives = 52/60 (86%)
 Frame = -2

Query: 602  QTLCSEAKSLKQTVIASKIPATKRSMERFLFQLKAFLHTTASGCTFWMGNLKHKT*WGRL 423
            QTLCSEAK LKQTVI SKIP+TKRSMERFLF++KA LHT+ S CTFWMGNLKHK   G++
Sbjct: 1410 QTLCSEAKGLKQTVITSKIPSTKRSMERFLFRVKALLHTSPSECTFWMGNLKHKDLMGQV 1469



 Score = 47.4 bits (111), Expect(2) = 2e-26
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = -1

Query: 441  DLMGQVVSSQPYIGDQDENIDDEPVDSVLSDQPATVANDEDSE 313
            DLMGQVVSSQ Y+  Q++N+D+ P + +  DQ    A++ED E
Sbjct: 1464 DLMGQVVSSQAYMDHQNDNLDENPEEPIAEDQSTGDASEEDRE 1506


>ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group D2 protein-like
            [Vitis vinifera]
          Length = 1069

 Score = 81.6 bits (200), Expect(2) = 9e-22
 Identities = 38/51 (74%), Positives = 44/51 (86%)
 Frame = -2

Query: 575  LKQTVIASKIPATKRSMERFLFQLKAFLHTTASGCTFWMGNLKHKT*WGRL 423
            LKQTVI SKIP+TKRSMERFLF++KA LHT+ S CTFWMGNLKHK   G++
Sbjct: 981  LKQTVITSKIPSTKRSMERFLFRVKALLHTSPSECTFWMGNLKHKDLMGQV 1031



 Score = 47.4 bits (111), Expect(2) = 9e-22
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = -1

Query: 441  DLMGQVVSSQPYIGDQDENIDDEPVDSVLSDQPATVANDEDSE 313
            DLMGQVVSSQ Y+  Q++N+D+ P + +  DQ    A++ED E
Sbjct: 1026 DLMGQVVSSQAYMDHQNDNLDENPEEPIAEDQSTGDASEEDRE 1068


>ref|XP_002522593.1| conserved hypothetical protein [Ricinus communis]
            gi|223538184|gb|EEF39794.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1188

 Score = 68.2 bits (165), Expect(2) = 2e-15
 Identities = 30/51 (58%), Positives = 40/51 (78%)
 Frame = -2

Query: 575  LKQTVIASKIPATKRSMERFLFQLKAFLHTTASGCTFWMGNLKHKT*WGRL 423
            LK+  + SKIP+TKR++ERFLF +KA LH T++  TFWMGNLKHK   G++
Sbjct: 1086 LKKIAVTSKIPSTKRAIERFLFHVKALLHATSNARTFWMGNLKHKDLMGQV 1136



 Score = 39.7 bits (91), Expect(2) = 2e-15
 Identities = 18/40 (45%), Positives = 29/40 (72%)
 Frame = -1

Query: 441  DLMGQVVSSQPYIGDQDENIDDEPVDSVLSDQPATVANDE 322
            DLMGQVV SQ Y  DQD ++D +  ++  ++QP +VA+++
Sbjct: 1131 DLMGQVVGSQVYGDDQDADVDGDLAEAEDNNQPISVASED 1170


>gb|EEC81533.1| hypothetical protein OsI_24939 [Oryza sativa Indica Group]
            gi|222636453|gb|EEE66585.1| hypothetical protein
            OsJ_23134 [Oryza sativa Japonica Group]
          Length = 1489

 Score = 78.6 bits (192), Expect(2) = 1e-14
 Identities = 36/60 (60%), Positives = 47/60 (78%)
 Frame = -2

Query: 602  QTLCSEAKSLKQTVIASKIPATKRSMERFLFQLKAFLHTTASGCTFWMGNLKHKT*WGRL 423
            QT+C+EAK  K+T+I SKIP  KRS+ERF+FQ+KA LH  ++  TFWMGNL+HK   G+L
Sbjct: 1380 QTICAEAKGHKRTMITSKIPVAKRSLERFVFQVKALLHNCSTEETFWMGNLRHKDLQGQL 1439



 Score = 26.6 bits (57), Expect(2) = 1e-14
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
 Frame = -1

Query: 441  DLMGQVVSSQPYIGDQDENIDDEPVDSVLSDQPATVAN------DEDSETE*N 301
            DL GQ+VSSQ Y G  D++ +DE     +   P T A+      DED+  + N
Sbjct: 1434 DLQGQLVSSQVY-GSVDDSPNDE--QEQMETDPETPADENANAMDEDAAEDSN 1483


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