BLASTX nr result

ID: Panax21_contig00032745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032745
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]    87   2e-15
ref|XP_002524463.1| nucleic acid binding protein, putative [Rici...    87   2e-15
emb|CBI28171.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin...    62   5e-08
ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin...    62   5e-08

>emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]
          Length = 554

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/84 (52%), Positives = 62/84 (73%)
 Frame = +1

Query: 1   KQQLLSSVVTRKSVPKTRRSTEESSVFSGPKTLDQIKEEKKNAYENGDSFRKVRHSSRAS 180
           ++Q +SS  +RK V + R ST E + F+GPK+L QIKEEK+ A ENG+ F K+ +SS   
Sbjct: 464 QRQHISSEDSRKPVSRERISTREYTTFTGPKSLAQIKEEKRKAEENGEGFGKMGYSSNTP 523

Query: 181 SENFQGPKPLSKILEDKKRLVSVI 252
           S +FQGPKPLS+IL+DK++L S +
Sbjct: 524 SADFQGPKPLSEILKDKRKLGSAM 547


>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536251|gb|EEF37903.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 530

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/79 (55%), Positives = 59/79 (74%)
 Frame = +1

Query: 1   KQQLLSSVVTRKSVPKTRRSTEESSVFSGPKTLDQIKEEKKNAYENGDSFRKVRHSSRAS 180
           ++Q LSS V RK   K R+S++ S+ F+GPKTL QIKEEKK A ENGD   K  +SSR +
Sbjct: 448 RKQSLSSEVLRKPASKERKSSQASTQFTGPKTLAQIKEEKKKAEENGDYTGKTDNSSRMA 507

Query: 181 SENFQGPKPLSKILEDKKR 237
           + +F+ PKPLS+IL+DK+R
Sbjct: 508 TADFESPKPLSEILKDKRR 526


>emb|CBI28171.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 43/80 (53%), Positives = 60/80 (75%)
 Frame = +1

Query: 1   KQQLLSSVVTRKSVPKTRRSTEESSVFSGPKTLDQIKEEKKNAYENGDSFRKVRHSSRAS 180
           ++Q +SS  +RK V + R ST E + F+GPK+L QIKEEK+ A ENG+ F K+ +SS   
Sbjct: 428 QRQHISSEDSRKPVSRERISTREYTTFTGPKSLAQIKEEKRKAEENGEGFGKMGYSSNTP 487

Query: 181 SENFQGPKPLSKILEDKKRL 240
           S +FQGPKPLS+IL+DK++L
Sbjct: 488 SADFQGPKPLSEILKDKRKL 507


>ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Glycine max]
          Length = 526

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 37/80 (46%), Positives = 49/80 (61%)
 Frame = +1

Query: 1   KQQLLSSVVTRKSVPKTRRSTEESSVFSGPKTLDQIKEEKKNAYENGDSFRKVRHSSRAS 180
           K+Q +SS ++RK V K R    ESS FSGPKTL +IKEEK      G    K      ++
Sbjct: 451 KRQFVSSKISRKPVFKQRGLIHESSTFSGPKTLAEIKEEKMKKNAEGSLHWK------ST 504

Query: 181 SENFQGPKPLSKILEDKKRL 240
           S +FQ PKPLS+IL+ K+ +
Sbjct: 505 STDFQDPKPLSEILKVKRTM 524


>ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Glycine max]
          Length = 524

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 36/80 (45%), Positives = 49/80 (61%)
 Frame = +1

Query: 1   KQQLLSSVVTRKSVPKTRRSTEESSVFSGPKTLDQIKEEKKNAYENGDSFRKVRHSSRAS 180
           K+Q LSS ++RK   K R    E S FSGPKTL +IKEEK    E    +       +++
Sbjct: 450 KRQFLSSKISRKPAFKQRGFIHEFSAFSGPKTLAEIKEEKMKKAEGSLHW-------KST 502

Query: 181 SENFQGPKPLSKILEDKKRL 240
           S +FQ PKPLS+IL+DK+ +
Sbjct: 503 STDFQDPKPLSEILKDKRTM 522


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