BLASTX nr result

ID: Panax21_contig00032730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032730
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi...   252   2e-65
emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]   246   2e-63
ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|2...   243   2e-62
ref|XP_002512558.1| pentatricopeptide repeat-containing protein,...   233   2e-59
ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containi...   227   7e-58

>ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial [Vitis vinifera]
           gi|296088528|emb|CBI37519.3| unnamed protein product
           [Vitis vinifera]
          Length = 525

 Score =  252 bits (644), Expect = 2e-65
 Identities = 120/176 (68%), Positives = 144/176 (81%)
 Frame = -3

Query: 528 QFDVAWQLIIEMDQELQKQEQFKDINAKPTTTTFYVLIRRFIAAGFTRQAIRAFDDMGCF 349
           QFDVAWQ IIEMDQ           + +PT+TTF +LIRR ++AG TRQA+RAFDDM CF
Sbjct: 132 QFDVAWQFIIEMDQN----------SLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCF 181

Query: 348 VEKQTDQFDFCYLLDTLCKYGYVKVATEIFNKRKWEFEPNEKMYTVLIYGWCKINKGKMA 169
           VEK  D  DFCYLLDTL KYGYVK+A++IFN+RK++FE N KMYT+LIYGWCKIN+  +A
Sbjct: 182 VEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIA 241

Query: 168 DRFLKEMVDRGIEPNVVTYNVILNGICRRCSLHPEDRFERTIQEAQKVFDEMRGRG 1
           +R L EMV+RGIE NVVTYNV+LNGICRR SLHP+DRFERTI++A+KV DEMR +G
Sbjct: 242 ERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKG 297


>emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
          Length = 525

 Score =  246 bits (628), Expect = 2e-63
 Identities = 117/176 (66%), Positives = 141/176 (80%)
 Frame = -3

Query: 528 QFDVAWQLIIEMDQELQKQEQFKDINAKPTTTTFYVLIRRFIAAGFTRQAIRAFDDMGCF 349
           QFDVAWQ IIEMDQ           + +PT+TTF +LIRR ++AG TRQA+RAFDDM CF
Sbjct: 132 QFDVAWQFIIEMDQN----------SLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCF 181

Query: 348 VEKQTDQFDFCYLLDTLCKYGYVKVATEIFNKRKWEFEPNEKMYTVLIYGWCKINKGKMA 169
           VEK  D  DFCYLLDTL KYGYVK+A++IFN+RK++FE N KMYT+LIYGWCKIN+  +A
Sbjct: 182 VEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIA 241

Query: 168 DRFLKEMVDRGIEPNVVTYNVILNGICRRCSLHPEDRFERTIQEAQKVFDEMRGRG 1
           +R L EMV+RG+  NVVTYNV+LNGICR  SLHP+DRFERTI++A+KV DEMR  G
Sbjct: 242 ERLLGEMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQXG 297


>ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|222855714|gb|EEE93261.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  243 bits (619), Expect = 2e-62
 Identities = 120/176 (68%), Positives = 134/176 (76%)
 Frame = -3

Query: 528 QFDVAWQLIIEMDQELQKQEQFKDINAKPTTTTFYVLIRRFIAAGFTRQAIRAFDDMGCF 349
           QFDV WQLI+EMDQ           N KPT+ TF+VLIRR +AAG TRQAIRAFDDM  F
Sbjct: 155 QFDVCWQLIVEMDQR----------NVKPTSETFFVLIRRLVAAGLTRQAIRAFDDMESF 204

Query: 348 VEKQTDQFDFCYLLDTLCKYGYVKVATEIFNKRKWEFEPNEKMYTVLIYGWCKINKGKMA 169
           V +  ++  FC+LLDTLCKYGYVKV  EIFNKRK  F PN KMYTVLIYGWCKI +  MA
Sbjct: 205 VSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRKHRFSPNVKMYTVLIYGWCKIGRIDMA 264

Query: 168 DRFLKEMVDRGIEPNVVTYNVILNGICRRCSLHPEDRFERTIQEAQKVFDEMRGRG 1
           +RFLKE  +RGIE  VVTYNV+LNGICRR SLHPE RFERTI  A+ +FDEMR RG
Sbjct: 265 ERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMRERG 320


>ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548519|gb|EEF50010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 511

 Score =  233 bits (593), Expect = 2e-59
 Identities = 112/176 (63%), Positives = 136/176 (77%)
 Frame = -3

Query: 528 QFDVAWQLIIEMDQELQKQEQFKDINAKPTTTTFYVLIRRFIAAGFTRQAIRAFDDMGCF 349
           QFDV+WQLII+MDQ           N +P + TF +LIRR I+AGFTRQAIRAFDDM  F
Sbjct: 118 QFDVSWQLIIQMDQN----------NLQPNSHTFLILIRRLISAGFTRQAIRAFDDMESF 167

Query: 348 VEKQTDQFDFCYLLDTLCKYGYVKVATEIFNKRKWEFEPNEKMYTVLIYGWCKINKGKMA 169
           + +  +Q  FC+LLDTLCKYGY+KVA E+FNKRK+ F PN ++YTVLIYGWCKI +  MA
Sbjct: 168 IAETVNQTHFCFLLDTLCKYGYIKVAVEVFNKRKFRFLPNVRIYTVLIYGWCKIGRIDMA 227

Query: 168 DRFLKEMVDRGIEPNVVTYNVILNGICRRCSLHPEDRFERTIQEAQKVFDEMRGRG 1
           +RF++EM + GIE NVVTYNV+L+GICRR  L PE RFERTI +A KVFDEMR +G
Sbjct: 228 ERFIREMDEMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKG 283


>ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Glycine max]
          Length = 510

 Score =  227 bits (579), Expect = 7e-58
 Identities = 110/176 (62%), Positives = 131/176 (74%)
 Frame = -3

Query: 528 QFDVAWQLIIEMDQELQKQEQFKDINAKPTTTTFYVLIRRFIAAGFTRQAIRAFDDMGCF 349
           QFDVAWQLI+EMDQ           +  PT +TF  LIRR I AG TRQA+RAF D+  F
Sbjct: 116 QFDVAWQLIVEMDQRH---------HLTPTPSTFLTLIRRLICAGLTRQAVRAFHDIDAF 166

Query: 348 VEKQTDQFDFCYLLDTLCKYGYVKVATEIFNKRKWEFEPNEKMYTVLIYGWCKINKGKMA 169
            E +T   DFC LLDTLCKYG+V++A E+FNK K  F P  KMYTVLIYGWCKI + K A
Sbjct: 167 SETKTTPQDFCVLLDTLCKYGHVRLAVEVFNKNKHTFPPTVKMYTVLIYGWCKIGRIKTA 226

Query: 168 DRFLKEMVDRGIEPNVVTYNVILNGICRRCSLHPEDRFERTIQEAQKVFDEMRGRG 1
             FL EM+D+GIEPNVVTYNV+LNG+CR+ SLHPE+RFERTI+ A++VFD+MR  G
Sbjct: 227 QSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQMRESG 282


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