BLASTX nr result

ID: Panax21_contig00032729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032729
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-l...   160   1e-37
emb|CBI17533.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   156   2e-36
ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   155   2e-36
ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   154   7e-36

>ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-like [Vitis vinifera]
          Length = 759

 Score =  160 bits (404), Expect = 1e-37
 Identities = 87/129 (67%), Positives = 95/129 (73%), Gaps = 1/129 (0%)
 Frame = +3

Query: 54  APPLIDSQFTKLDELLTQTQLYSEFLLEKMDDITKNGLXXXXXXXXXXXXXXXXXXXXX- 230
           AP L DSQFTKLDELLTQTQLYSEFLLEKMD IT N +                      
Sbjct: 81  APHLNDSQFTKLDELLTQTQLYSEFLLEKMDSITFNRVEEKESEIVEVKKRGRGSKRKAE 140

Query: 231 YNTRKAKKAVAAMLSRSKEGTASEDLSLTKEERTEKEQAELVPLLTGGRLKPYQIKGVKW 410
           YN RKAK+AVAAML+RSKEG   ED++LT+EER EKEQA LVPLLTGG+LK YQIKGVKW
Sbjct: 141 YNNRKAKRAVAAMLTRSKEGATPEDVNLTEEERAEKEQAGLVPLLTGGKLKSYQIKGVKW 200

Query: 411 MISLWQNGL 437
           +ISLWQNGL
Sbjct: 201 LISLWQNGL 209


>emb|CBI17533.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score =  160 bits (404), Expect = 1e-37
 Identities = 87/129 (67%), Positives = 95/129 (73%), Gaps = 1/129 (0%)
 Frame = +3

Query: 54  APPLIDSQFTKLDELLTQTQLYSEFLLEKMDDITKNGLXXXXXXXXXXXXXXXXXXXXX- 230
           AP L DSQFTKLDELLTQTQLYSEFLLEKMD IT N +                      
Sbjct: 81  APHLNDSQFTKLDELLTQTQLYSEFLLEKMDSITFNRVEEKESEIVEVKKRGRGSKRKAE 140

Query: 231 YNTRKAKKAVAAMLSRSKEGTASEDLSLTKEERTEKEQAELVPLLTGGRLKPYQIKGVKW 410
           YN RKAK+AVAAML+RSKEG   ED++LT+EER EKEQA LVPLLTGG+LK YQIKGVKW
Sbjct: 141 YNNRKAKRAVAAMLTRSKEGATPEDVNLTEEERAEKEQAGLVPLLTGGKLKSYQIKGVKW 200

Query: 411 MISLWQNGL 437
           +ISLWQNGL
Sbjct: 201 LISLWQNGL 209


>ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 828

 Score =  156 bits (394), Expect = 2e-36
 Identities = 83/126 (65%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
 Frame = +3

Query: 63  LIDSQFTKLDELLTQTQLYSEFLLEKMDDITKNGLXXXXXXXXXXXXXXXXXXXXX-YNT 239
           L D+QFTKLDELLTQTQLYSEFLLEKMDDIT N +                      YN 
Sbjct: 154 LSDNQFTKLDELLTQTQLYSEFLLEKMDDITFNEMEEDKKSVEKSSGRGSKRKAAARYNN 213

Query: 240 RKAKKAVAAMLSRSKEGTASEDLSLTKEERTEKEQAELVPLLTGGRLKPYQIKGVKWMIS 419
           +KAK+AVAAML+RSKEG   ED++LT EER EKEQ+ELVPLLTGG+LK YQ+KGVKW+IS
Sbjct: 214 KKAKRAVAAMLTRSKEGEQDEDVNLTGEERIEKEQSELVPLLTGGKLKSYQLKGVKWLIS 273

Query: 420 LWQNGL 437
           LWQNGL
Sbjct: 274 LWQNGL 279


>ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 943

 Score =  155 bits (393), Expect = 2e-36
 Identities = 82/128 (64%), Positives = 93/128 (72%)
 Frame = +3

Query: 54  APPLIDSQFTKLDELLTQTQLYSEFLLEKMDDITKNGLXXXXXXXXXXXXXXXXXXXXXY 233
           A  L D QF KLDELLTQT+LYSEFLLEKMDDIT N                       Y
Sbjct: 264 AVDLNDIQFNKLDELLTQTRLYSEFLLEKMDDITLNREEQESNPSAKKGRGSKRKVASQY 323

Query: 234 NTRKAKKAVAAMLSRSKEGTASEDLSLTKEERTEKEQAELVPLLTGGRLKPYQIKGVKWM 413
           NTRKAKKAVAAML+RSKE   +ED+++T+EER EKEQ EL+PLLTGG+LK YQ+KGVKW+
Sbjct: 324 NTRKAKKAVAAMLTRSKESEKTEDMNMTEEERVEKEQKELMPLLTGGKLKNYQLKGVKWL 383

Query: 414 ISLWQNGL 437
           ISLWQNGL
Sbjct: 384 ISLWQNGL 391


>ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 822

 Score =  154 bits (389), Expect = 7e-36
 Identities = 82/126 (65%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
 Frame = +3

Query: 63  LIDSQFTKLDELLTQTQLYSEFLLEKMDDITKNGLXXXXXXXXXXXXXXXXXXXXX-YNT 239
           L D+QFTKLDELLTQTQLYSEFLLEKMDDIT + +                      YN 
Sbjct: 148 LSDNQFTKLDELLTQTQLYSEFLLEKMDDITFSEMEEDKKSVEKSSGRGSKRKAAARYNN 207

Query: 240 RKAKKAVAAMLSRSKEGTASEDLSLTKEERTEKEQAELVPLLTGGRLKPYQIKGVKWMIS 419
           +KAK+AVAAML+RSKEG   ED++LT EER EKEQ+ELVPLLTGG+LK YQ+KGVKW+IS
Sbjct: 208 KKAKRAVAAMLTRSKEGEQDEDVNLTGEERIEKEQSELVPLLTGGKLKSYQLKGVKWLIS 267

Query: 420 LWQNGL 437
           LWQNGL
Sbjct: 268 LWQNGL 273


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