BLASTX nr result
ID: Panax21_contig00032682
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00032682
(521 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-l... 79 3e-29
ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207... 75 3e-27
emb|CBI37573.3| unnamed protein product [Vitis vinifera] 70 2e-26
ref|XP_002309892.1| predicted protein [Populus trichocarpa] gi|2... 77 3e-26
ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communi... 79 1e-24
>ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
Length = 674
Score = 79.3 bits (194), Expect(3) = 3e-29
Identities = 44/68 (64%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Frame = +3
Query: 138 IWTMKFSPDGQYLASGGEDGVVRIWSVTSVCTSSKSLYAECN--SQGKVGKSCSDIKRLS 311
IWTMKFSPDGQYLASGGEDGVVRIW VTS S K L E N + K GKS K+ S
Sbjct: 234 IWTMKFSPDGQYLASGGEDGVVRIWCVTSTDASCKYLTTEGNFGCEVKDGKSSFGRKKPS 293
Query: 312 QASVIIPD 335
A V+IPD
Sbjct: 294 YAPVVIPD 301
Score = 56.6 bits (135), Expect(3) = 3e-29
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = +1
Query: 325 LFQIEELPLQEFHCHTSDIFLLDWSNSNCLLSSSKDKT 438
+FQIEE PLQEFH H SD+ L WS SN LLSSS DKT
Sbjct: 303 IFQIEESPLQEFHGHASDVLDLAWSKSNSLLSSSMDKT 340
Score = 37.7 bits (86), Expect(3) = 3e-29
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 434 RLVRPWKVGHEERLGVFHHNNYV 502
+ VR W+VGH+E L VF HNNYV
Sbjct: 339 KTVRLWQVGHDECLNVFRHNNYV 361
>ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207772 [Cucumis sativus]
gi|449507515|ref|XP_004163054.1| PREDICTED:
uncharacterized LOC101207772 [Cucumis sativus]
Length = 668
Score = 75.1 bits (183), Expect(3) = 3e-27
Identities = 50/104 (48%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
Frame = +3
Query: 51 KSQKNKLKIQKFNHKTR-----GLY--HTITLDYC*IWTMKFSPDGQYLASGGEDGVVRI 209
KSQ ++K+ + HK R LY I IWTMKFSPDG+YLASGGEDGVVRI
Sbjct: 190 KSQSCRMKV--YQHKKRCSEFSALYMRQQICAHKGLIWTMKFSPDGKYLASGGEDGVVRI 247
Query: 210 WSVTSVCTSSKSLY--AECNSQGKVGKSCSDIKRLSQASVIIPD 335
W VT SS+ L N++ K GKS K L A+V+IP+
Sbjct: 248 WRVTYANASSEFLADDGNYNTKPKEGKSSFSSKPLRFATVVIPE 291
Score = 60.5 bits (145), Expect(3) = 3e-27
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +1
Query: 325 LFQIEELPLQEFHCHTSDIFLLDWSNSNCLLSSSKDKT 438
+FQI+ELP+QE H H+SDI + WS SNCLLSSSKDKT
Sbjct: 293 VFQIDELPIQELHGHSSDILDIAWSTSNCLLSSSKDKT 330
Score = 31.6 bits (70), Expect(3) = 3e-27
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 434 RLVRPWKVGHEERLGVFHHNNYV 502
+ VR W+V ++ L VFHH NYV
Sbjct: 329 KTVRLWQVSSDQCLNVFHHKNYV 351
>emb|CBI37573.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 69.7 bits (169), Expect(3) = 2e-26
Identities = 40/66 (60%), Positives = 41/66 (62%)
Frame = +3
Query: 138 IWTMKFSPDGQYLASGGEDGVVRIWSVTSVCTSSKSLYAECNSQGKVGKSCSDIKRLSQA 317
IWTMKFSPDGQYLASGGEDGVVRIW VTS S K L E N C S A
Sbjct: 240 IWTMKFSPDGQYLASGGEDGVVRIWCVTSTDASCKYLTTEGNF------GCEP----SYA 289
Query: 318 SVIIPD 335
V+IPD
Sbjct: 290 PVVIPD 295
Score = 56.6 bits (135), Expect(3) = 2e-26
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = +1
Query: 325 LFQIEELPLQEFHCHTSDIFLLDWSNSNCLLSSSKDKT 438
+FQIEE PLQEFH H SD+ L WS SN LLSSS DKT
Sbjct: 297 IFQIEESPLQEFHGHASDVLDLAWSKSNSLLSSSMDKT 334
Score = 37.7 bits (86), Expect(3) = 2e-26
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 434 RLVRPWKVGHEERLGVFHHNNYV 502
+ VR W+VGH+E L VF HNNYV
Sbjct: 333 KTVRLWQVGHDECLNVFRHNNYV 355
>ref|XP_002309892.1| predicted protein [Populus trichocarpa] gi|222852795|gb|EEE90342.1|
predicted protein [Populus trichocarpa]
Length = 550
Score = 76.6 bits (187), Expect(3) = 3e-26
Identities = 39/68 (57%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +3
Query: 138 IWTMKFSPDGQYLASGGEDGVVRIWSVTSVCTSSKSLYAECNSQG--KVGKSCSDIKRLS 311
IWTMKFSPDGQYLA+GGED ++RIW VTSV +S KS +E +S K GKS K+
Sbjct: 170 IWTMKFSPDGQYLATGGEDRIIRIWRVTSVDSSCKSFSSEGHSDSNLKEGKSSLRTKKRM 229
Query: 312 QASVIIPD 335
+SV+IP+
Sbjct: 230 HSSVVIPE 237
Score = 57.0 bits (136), Expect(3) = 3e-26
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = +1
Query: 325 LFQIEELPLQEFHCHTSDIFLLDWSNSNCLLSSSKDKT 438
+FQIEE PLQEFH HTS+I L WS+SN LLSSS DKT
Sbjct: 239 VFQIEETPLQEFHGHTSEILDLAWSDSNHLLSSSMDKT 276
Score = 30.0 bits (66), Expect(3) = 3e-26
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 434 RLVRPWKVGHEERLGVFHHNNYV 502
+ VR W VG LG+FHH++YV
Sbjct: 275 KTVRLWLVGCNYCLGIFHHSSYV 297
>ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communis]
gi|223543598|gb|EEF45127.1| WD-repeat protein, putative
[Ricinus communis]
Length = 654
Score = 78.6 bits (192), Expect(2) = 1e-24
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +3
Query: 138 IWTMKFSPDGQYLASGGEDGVVRIWSVTSVCTSSKSLYAECNSQGKVGKSCSDIKRLSQA 317
IWTMKFSPDGQYLA+GGEDG+VRIW VTSV KS +E + K GKS +++S A
Sbjct: 220 IWTMKFSPDGQYLATGGEDGIVRIWQVTSVNGCQKSFASEDSFDMKEGKS---KRKMSHA 276
Query: 318 SVIIPD 335
SV+IP+
Sbjct: 277 SVVIPE 282
Score = 59.7 bits (143), Expect(2) = 1e-24
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +1
Query: 325 LFQIEELPLQEFHCHTSDIFLLDWSNSNCLLSSSKDKTCSPMESGT 462
+FQ+EE P+ EF+ H+SD+ L WSNSNCLLSSSKDKT + G+
Sbjct: 284 IFQLEESPVHEFYGHSSDVLDLAWSNSNCLLSSSKDKTVRLWQVGS 329