BLASTX nr result

ID: Panax21_contig00032680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032680
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat...   246   1e-63
ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat...   226   1e-57
ref|XP_002304652.1| predicted protein [Populus trichocarpa] gi|2...   220   8e-56
ref|XP_002512645.1| pentatricopeptide repeat-containing protein,...   220   1e-55
ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat...   218   4e-55

>ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  246 bits (628), Expect = 1e-63
 Identities = 113/147 (76%), Positives = 137/147 (93%)
 Frame = +3

Query: 3   MVSAYSMHGLGEEALRIFDTMQKTDIKPNQLTFVGILSACSNTGSLDQGQNYFTSMVGDY 182
           M+S YSMHGLG EALRIFD MQ+T++KP++LTFVG+LSAC+N G LDQGQ YFTSM+ D+
Sbjct: 311 MISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDH 370

Query: 183 GIEPCIEHYTCMVSLLGK*GHLDKAMKLIEEIPFEPSVMVWRALLGACVVHNDLELGKLS 362
           GIEPCIEHYTCMV LLG+ GHLDKA+KLI+EIPF+PSVMVWRALLGACV+HND+ELG++S
Sbjct: 371 GIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRIS 430

Query: 363 AERVLEMEPQDEASYVLLSNIYASCKR 443
           A+RVLEMEPQD+A++VLLSN+YA+ KR
Sbjct: 431 AQRVLEMEPQDKATHVLLSNMYATAKR 457


>ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
           gi|449515059|ref|XP_004164567.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At5g13230,
           mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  226 bits (577), Expect = 1e-57
 Identities = 102/147 (69%), Positives = 132/147 (89%)
 Frame = +3

Query: 3   MVSAYSMHGLGEEALRIFDTMQKTDIKPNQLTFVGILSACSNTGSLDQGQNYFTSMVGDY 182
           ++  YSMHGLG EA+++F+ M++T  KP++LTFVG+LSACSNTG LD+G+ YFTSM  DY
Sbjct: 421 IICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDY 480

Query: 183 GIEPCIEHYTCMVSLLGK*GHLDKAMKLIEEIPFEPSVMVWRALLGACVVHNDLELGKLS 362
           GIEPC+EHYTCMV L+G+ G+LD+A+K IE+IPFEPSVM+WRALLGACV+HND+ELG++S
Sbjct: 481 GIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRIS 540

Query: 363 AERVLEMEPQDEASYVLLSNIYASCKR 443
           A+RVLE+EP+DEAS+VLLSNIYA  +R
Sbjct: 541 AQRVLELEPRDEASHVLLSNIYARARR 567


>ref|XP_002304652.1| predicted protein [Populus trichocarpa] gi|222842084|gb|EEE79631.1|
           predicted protein [Populus trichocarpa]
          Length = 820

 Score =  220 bits (561), Expect = 8e-56
 Identities = 103/147 (70%), Positives = 128/147 (87%)
 Frame = +3

Query: 3   MVSAYSMHGLGEEALRIFDTMQKTDIKPNQLTFVGILSACSNTGSLDQGQNYFTSMVGDY 182
           M+S YS+HGL  EAL+ F++M +T+ KP+++TFVGILSACSN G LD+GQ YF SMV +Y
Sbjct: 520 MISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEY 579

Query: 183 GIEPCIEHYTCMVSLLGK*GHLDKAMKLIEEIPFEPSVMVWRALLGACVVHNDLELGKLS 362
            IEPC EHYTCMV LLG+ GHLDKA KL+ EIPFEPSVMVWRALL ACV+HND+ELG++S
Sbjct: 580 DIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRIS 639

Query: 363 AERVLEMEPQDEASYVLLSNIYASCKR 443
           A+RVLE+EP+DEA++VLLSNIYA+ +R
Sbjct: 640 AQRVLEIEPEDEATHVLLSNIYANARR 666


>ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548606|gb|EEF50097.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 716

 Score =  220 bits (560), Expect = 1e-55
 Identities = 104/147 (70%), Positives = 126/147 (85%)
 Frame = +3

Query: 3   MVSAYSMHGLGEEALRIFDTMQKTDIKPNQLTFVGILSACSNTGSLDQGQNYFTSMVGDY 182
           M+S YSMHGL  EAL+ F  MQ+T+  PN+LTFV ILSACSN G LD GQNYF SMV DY
Sbjct: 416 MISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDY 475

Query: 183 GIEPCIEHYTCMVSLLGK*GHLDKAMKLIEEIPFEPSVMVWRALLGACVVHNDLELGKLS 362
           GIEPC+EHYTCMV LLG+ GHLDKA+KLIEEIP EP+V VWRALLGACV+HND++LG +S
Sbjct: 476 GIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMS 535

Query: 363 AERVLEMEPQDEASYVLLSNIYASCKR 443
           A+++L+++PQDEA++VLLSNIYA  +R
Sbjct: 536 AQQILQIDPQDEATHVLLSNIYARTRR 562



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/145 (26%), Positives = 70/145 (48%)
 Frame = +3

Query: 3   MVSAYSMHGLGEEALRIFDTMQKTDIKPNQLTFVGILSACSNTGSLDQGQNYFTSMVGDY 182
           M+S Y+      EA+ +F  M++  + PNQ TF  +L +C++  +L  G+     ++   
Sbjct: 214 MISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVL-KV 272

Query: 183 GIEPCIEHYTCMVSLLGK*GHLDKAMKLIEEIPFEPSVMVWRALLGACVVHNDLELGKLS 362
           G++  +     ++ +  K G LD +MKL  E+P    V  W  ++   V   D +     
Sbjct: 273 GLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEV-TWNTMIVGYVQSGDGDKALSL 331

Query: 363 AERVLEMEPQDEASYVLLSNIYASC 437
            + +LE + Q  AS V  S++  +C
Sbjct: 332 YKNMLECQVQ--ASEVTYSSVLRAC 354


>ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  218 bits (555), Expect = 4e-55
 Identities = 101/147 (68%), Positives = 128/147 (87%)
 Frame = +3

Query: 3   MVSAYSMHGLGEEALRIFDTMQKTDIKPNQLTFVGILSACSNTGSLDQGQNYFTSMVGDY 182
           ++  YS+HGLG EAL +FD MQ+++ KPN+LTFVG+LSACSN G LD+G+ +F SM+ DY
Sbjct: 480 LICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDY 539

Query: 183 GIEPCIEHYTCMVSLLGK*GHLDKAMKLIEEIPFEPSVMVWRALLGACVVHNDLELGKLS 362
           GIEPCIEHYTCMV LLG+ G  D+A+KLI EIPF+PSVMVWRALLGACV+H +L+LGK+ 
Sbjct: 540 GIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVC 599

Query: 363 AERVLEMEPQDEASYVLLSNIYASCKR 443
           A+RVLEMEPQD+A++VLLSN+YA+ KR
Sbjct: 600 AQRVLEMEPQDDATHVLLSNMYATAKR 626


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