BLASTX nr result

ID: Panax21_contig00032664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032664
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276607.2| PREDICTED: uncharacterized protein LOC100253...    75   1e-11
emb|CBI15828.3| unnamed protein product [Vitis vinifera]               75   1e-11
ref|XP_002518281.1| nucleic acid binding protein, putative [Rici...    61   1e-07
ref|XP_004170318.1| PREDICTED: uncharacterized LOC101207419 [Cuc...    57   3e-06
ref|XP_004142733.1| PREDICTED: uncharacterized protein LOC101207...    57   3e-06

>ref|XP_002276607.2| PREDICTED: uncharacterized protein LOC100253523 [Vitis vinifera]
          Length = 854

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 59/170 (34%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
 Frame = +1

Query: 1    GTGTYIPILDCYSLRERPSQGRRNQAQEIRCQLQKHGCNNG-------TNSFEGGGQELT 159
            GTGTY P +     R+RP   RRNQA E   QL +    NG        N  E    EL+
Sbjct: 691  GTGTYFPNMSHLPNRDRPVGQRRNQALESHSQLHRRKHRNGLVAAQQEMNLIEETSHELS 750

Query: 160  QAQSMVLGNGEPGLYHEPLHVMSDNSPGNGISISNRILEFGSFGPLPS------------ 303
            Q Q  VLG+G      + +H        NG S+  + LEFGSFG + S            
Sbjct: 751  QLQYPVLGHG------KSIH-------ANGSSLPPKRLEFGSFGTMSSGLPTPDRCTKPD 797

Query: 304  ----------TSSLKAVEEQNPKQVKGKRQRRIAEKSLNLENEADFPPLS 423
                      T+S      Q+PK V G  ++R    S +L+NE DFPPLS
Sbjct: 798  SSGTLPAWGATASPVGSRMQSPKPVLGNEEKRFEGLSYHLKNEDDFPPLS 847


>emb|CBI15828.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 59/170 (34%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
 Frame = +1

Query: 1    GTGTYIPILDCYSLRERPSQGRRNQAQEIRCQLQKHGCNNG-------TNSFEGGGQELT 159
            GTGTY P +     R+RP   RRNQA E   QL +    NG        N  E    EL+
Sbjct: 766  GTGTYFPNMSHLPNRDRPVGQRRNQALESHSQLHRRKHRNGLVAAQQEMNLIEETSHELS 825

Query: 160  QAQSMVLGNGEPGLYHEPLHVMSDNSPGNGISISNRILEFGSFGPLPS------------ 303
            Q Q  VLG+G      + +H        NG S+  + LEFGSFG + S            
Sbjct: 826  QLQYPVLGHG------KSIH-------ANGSSLPPKRLEFGSFGTMSSGLPTPDRCTKPD 872

Query: 304  ----------TSSLKAVEEQNPKQVKGKRQRRIAEKSLNLENEADFPPLS 423
                      T+S      Q+PK V G  ++R    S +L+NE DFPPLS
Sbjct: 873  SSGTLPAWGATASPVGSRMQSPKPVLGNEEKRFEGLSYHLKNEDDFPPLS 922


>ref|XP_002518281.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223542501|gb|EEF44041.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 821

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 57/177 (32%), Positives = 77/177 (43%), Gaps = 32/177 (18%)
 Frame = +1

Query: 1    GTGTYIPILDCYSLRERPSQGRR-NQAQEIRCQLQKHGCNNGTNSFEGG------GQELT 159
            GTGTYIP +  +S RERPS  RR N        L +   +NG  +   G      G EL+
Sbjct: 644  GTGTYIPNMSYHSNRERPSSERRKNHVTANNGDLHRRTRDNGLAATRPGINSYQHGHELS 703

Query: 160  QAQSMVLGNGEPGLYHEPL--HVMSDNSPGNGISISNRILEFG----------------- 282
            +A+   LGNG+P      L    +   S  NG S  +  ++FG                 
Sbjct: 704  EAEYPYLGNGKPVPSEVQLSQSFVWGPSSANGFSRPSERIDFGGQELQLQEASLQERVPT 763

Query: 283  ------SFGPLPSTSSLKAVEEQNPKQVKGKRQRRIAEKSLNLENEADFPPLS**RA 435
                  S    PS+  + A E + P  V    Q R A +S +L++E DFPPLS  RA
Sbjct: 764  QDSSTSSTLVFPSSPEVTAAERREP--VLQNVQERAASESYHLKDEVDFPPLSHGRA 818


>ref|XP_004170318.1| PREDICTED: uncharacterized LOC101207419 [Cucumis sativus]
          Length = 816

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 55/172 (31%), Positives = 76/172 (44%), Gaps = 31/172 (18%)
 Frame = +1

Query: 1    GTGTYIPILDCYSLRERPSQGRRNQAQEIRCQLQKHGCNNG-------TNSFEGGGQELT 159
            GTGTY P ++ Y  R+RP+  R      +R        NNG       T   E  GQ+L 
Sbjct: 651  GTGTYFPNMNHY--RDRPASARGRNQVSVRSPR-----NNGRSLTPLETTVAEKSGQDLY 703

Query: 160  QAQSMVLGNGEPGLYHEPLHVMSDNSPGNG-ISISNRILEFGSFGPLPSTSSL------- 315
            Q  ++  G G   L      V   +  GNG +   +R +EFGSFG LP  SS+       
Sbjct: 704  QVPTVNHGGGIGMLSSSSSPVRKAHHNGNGAMPRPDRAVEFGSFGHLPIESSVDCSGEPT 763

Query: 316  ---------KAVEEQNPKQVKGKR-----QRRIA--EKSLNLENEADFPPLS 423
                      A+   +PK  K K+     Q R++   +S  L++E DFPPLS
Sbjct: 764  PATAHFQNSSALNVSSPKMQKAKQTLITDQDRLSVHMQSYELKDEEDFPPLS 815


>ref|XP_004142733.1| PREDICTED: uncharacterized protein LOC101207419 [Cucumis sativus]
          Length = 898

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 55/172 (31%), Positives = 76/172 (44%), Gaps = 31/172 (18%)
 Frame = +1

Query: 1    GTGTYIPILDCYSLRERPSQGRRNQAQEIRCQLQKHGCNNG-------TNSFEGGGQELT 159
            GTGTY P ++ Y  R+RP+  R      +R        NNG       T   E  GQ+L 
Sbjct: 733  GTGTYFPNMNHY--RDRPASARGRNQVSVRSPR-----NNGRSLTPLETTVAEKSGQDLY 785

Query: 160  QAQSMVLGNGEPGLYHEPLHVMSDNSPGNG-ISISNRILEFGSFGPLPSTSSL------- 315
            Q  ++  G G   L      V   +  GNG +   +R +EFGSFG LP  SS+       
Sbjct: 786  QVPTVNHGGGIGMLSSSSSPVRKAHHNGNGAMPRPDRAVEFGSFGHLPIESSVDCSGEPT 845

Query: 316  ---------KAVEEQNPKQVKGKR-----QRRIA--EKSLNLENEADFPPLS 423
                      A+   +PK  K K+     Q R++   +S  L++E DFPPLS
Sbjct: 846  PATAHFQNSSALNVSSPKMQKAKQTLITDQDRLSVHMQSYELKDEEDFPPLS 897


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