BLASTX nr result

ID: Panax21_contig00032648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032648
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511601.1| ubiquitin-protein ligase, putative [Ricinus ...   153   1e-35
ref|XP_004133782.1| PREDICTED: protein ARABIDILLO 1-like [Cucumi...   149   2e-34
ref|XP_004170976.1| PREDICTED: protein ARABIDILLO 1-like, partia...   149   2e-34
ref|XP_002301228.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33
ref|XP_002327055.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-33

>ref|XP_002511601.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223548781|gb|EEF50270.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 920

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/102 (72%), Positives = 80/102 (78%)
 Frame = +2

Query: 59  MSRRLRRKVARRGNNKLDLPSYPEINDENISLDETGVVDWTRLPDDSVIQLFSCLNYRDR 238
           MSRR+RRKVAR+G  K+ L S+PEI DE    D    VDWT LPDD+VIQLFSCLNYRDR
Sbjct: 1   MSRRVRRKVARKGKEKVALSSFPEIEDEVSCSDSNEAVDWTGLPDDTVIQLFSCLNYRDR 60

Query: 239 ASLSSTCRNWRILGISQCLWQSLDLRTHKCDATLATVLASRC 364
           ASLSSTCR WR LGIS CLW SLDLR+HKCDA  AT LA RC
Sbjct: 61  ASLSSTCRTWRALGISPCLWTSLDLRSHKCDAATATSLAPRC 102


>ref|XP_004133782.1| PREDICTED: protein ARABIDILLO 1-like [Cucumis sativus]
          Length = 918

 Score =  149 bits (377), Expect = 2e-34
 Identities = 70/102 (68%), Positives = 79/102 (77%)
 Frame = +2

Query: 59  MSRRLRRKVARRGNNKLDLPSYPEINDENISLDETGVVDWTRLPDDSVIQLFSCLNYRDR 238
           M+RR+RRKV R+G  KL LPSYPEI+ E   LD    VDWT LPDD+VIQLFSCLNYRDR
Sbjct: 1   MNRRVRRKVTRKGKEKLILPSYPEIDSEIADLDNKQTVDWTSLPDDTVIQLFSCLNYRDR 60

Query: 239 ASLSSTCRNWRILGISQCLWQSLDLRTHKCDATLATVLASRC 364
           A+ SSTCR WR+LG+S CLW S DLR HK DAT+A  LA RC
Sbjct: 61  ANFSSTCRTWRLLGLSSCLWTSFDLRAHKIDATMAGSLALRC 102


>ref|XP_004170976.1| PREDICTED: protein ARABIDILLO 1-like, partial [Cucumis sativus]
          Length = 574

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/102 (68%), Positives = 79/102 (77%)
 Frame = +2

Query: 59  MSRRLRRKVARRGNNKLDLPSYPEINDENISLDETGVVDWTRLPDDSVIQLFSCLNYRDR 238
           M+RR+RRKV R+G  KL LPSYPEI+ E   LD    VDWT LPDD+VIQLFSCLNYRDR
Sbjct: 1   MNRRVRRKVTRKGKEKLILPSYPEIDGEIADLDNKQTVDWTSLPDDTVIQLFSCLNYRDR 60

Query: 239 ASLSSTCRNWRILGISQCLWQSLDLRTHKCDATLATVLASRC 364
           A+ SSTCR WR+LG+S CLW S DLR HK DAT+A  LA RC
Sbjct: 61  ANFSSTCRTWRLLGLSSCLWTSFDLRAHKIDATMAGSLALRC 102


>ref|XP_002301228.1| predicted protein [Populus trichocarpa] gi|222842954|gb|EEE80501.1|
           predicted protein [Populus trichocarpa]
          Length = 918

 Score =  146 bits (369), Expect = 1e-33
 Identities = 67/102 (65%), Positives = 80/102 (78%)
 Frame = +2

Query: 59  MSRRLRRKVARRGNNKLDLPSYPEINDENISLDETGVVDWTRLPDDSVIQLFSCLNYRDR 238
           M+RR+R+KVA++   K++LPS PEI D  +  D    VDWT LPDD+VIQLFSCLNYRDR
Sbjct: 1   MNRRVRQKVAKKSKEKVELPSNPEIGDAGLCPDSNEDVDWTSLPDDTVIQLFSCLNYRDR 60

Query: 239 ASLSSTCRNWRILGISQCLWQSLDLRTHKCDATLATVLASRC 364
           ASLSSTC+ WR+LG+S CLW SLDLR HKCD  +A  LASRC
Sbjct: 61  ASLSSTCKTWRVLGLSSCLWISLDLRAHKCDPGMAVSLASRC 102


>ref|XP_002327055.1| predicted protein [Populus trichocarpa] gi|222835370|gb|EEE73805.1|
           predicted protein [Populus trichocarpa]
          Length = 918

 Score =  144 bits (363), Expect = 7e-33
 Identities = 66/102 (64%), Positives = 79/102 (77%)
 Frame = +2

Query: 59  MSRRLRRKVARRGNNKLDLPSYPEINDENISLDETGVVDWTRLPDDSVIQLFSCLNYRDR 238
           M+RR+RRKVA++   K+ +P  PEI D ++  D    VDWT LPDD+VIQLFSCLNYRDR
Sbjct: 1   MNRRVRRKVAKKSKEKVGVPGNPEIGDADLCPDSNEDVDWTSLPDDTVIQLFSCLNYRDR 60

Query: 239 ASLSSTCRNWRILGISQCLWQSLDLRTHKCDATLATVLASRC 364
           ASLSSTC+ WR+LG+S CLW SLDLR HKCD  +A  LASRC
Sbjct: 61  ASLSSTCKIWRVLGLSSCLWTSLDLRAHKCDPGMAVSLASRC 102


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