BLASTX nr result

ID: Panax21_contig00032646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032646
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310442.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
emb|CAN69476.1| hypothetical protein VITISV_017346 [Vitis vinife...    90   2e-16
ref|XP_002533524.1| hypothetical protein RCOM_1007940 [Ricinus c...    87   2e-15
ref|NP_180706.2| uncharacterized protein [Arabidopsis thaliana] ...    84   2e-14
ref|XP_002881178.1| hypothetical protein ARALYDRAFT_482077 [Arab...    83   3e-14

>ref|XP_002310442.1| predicted protein [Populus trichocarpa] gi|222853345|gb|EEE90892.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 59/134 (44%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
 Frame = +3

Query: 9   SFRLRVQSRKMDMEKGCRRRLVFGSGSKSSNILELKCT-NGNKEVRRSNTMPSRLSESTK 185
           S  ++    ++D +  CRRRLVF SGS +SNI+E K   + N   ++ N+MPSRL +S K
Sbjct: 349 SVEMKFHDSRVDSKMVCRRRLVFSSGSAASNIMEKKQRRDNNSSTKKMNSMPSRLKKSVK 408

Query: 186 SLTKIAPLNMEVDKAVEANGNGLTKKSMGWFSEEGFDSNMELPIEKLLGLDEFDGREGVE 365
                 P      K    N N          S++ F SN +LPIE LLGLDEFDG EGV+
Sbjct: 409 DGRIPTP------KVDSGNTN---------LSQDDFASNRKLPIEILLGLDEFDGHEGVD 453

Query: 366 SEFNKDDFSLNESL 407
           SEFN+  FSL++SL
Sbjct: 454 SEFNEGVFSLDDSL 467


>emb|CAN69476.1| hypothetical protein VITISV_017346 [Vitis vinifera]
           gi|297743765|emb|CBI36648.3| unnamed protein product
           [Vitis vinifera]
          Length = 434

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 57/125 (45%), Positives = 76/125 (60%)
 Frame = +3

Query: 30  SRKMDMEKGCRRRLVFGSGSKSSNILELKCTNGNKEVRRSNTMPSRLSESTKSLTKIAPL 209
           +RK D  +   RRLVF SGS +S ILE K  +  K V R++T PS LS+  K+  +  P 
Sbjct: 315 NRKTDPNE-VSRRLVFTSGSTASKILEWKQRSNKKGVWRTSTTPSSLSKPAKTSEETVPS 373

Query: 210 NMEVDKAVEANGNGLTKKSMGWFSEEGFDSNMELPIEKLLGLDEFDGREGVESEFNKDDF 389
           + + +  +E       +K +     E F SN ELPIE LLGLDEFDG EGV+ EFNKDDF
Sbjct: 374 DSD-NNIIEPT----EEKVLNQIFLEEFASNEELPIETLLGLDEFDGHEGVDLEFNKDDF 428

Query: 390 SLNES 404
            L+++
Sbjct: 429 FLDQA 433


>ref|XP_002533524.1| hypothetical protein RCOM_1007940 [Ricinus communis]
           gi|223526606|gb|EEF28854.1| hypothetical protein
           RCOM_1007940 [Ricinus communis]
          Length = 366

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 59/132 (44%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
 Frame = +3

Query: 36  KMDMEKGCRRRLVFGSGS-KSSNILELKC---TNGNKEVR-RSNTMPSRLSESTKSLTKI 200
           KMD  K CRRRL F S S  +  +LE K    TN +K+++  S+T PSRL  ST+   KI
Sbjct: 235 KMDSRKDCRRRLDFSSVSIVAVKMLEHKQRSNTNYSKKIKPASSTTPSRLRRSTEHSAKI 294

Query: 201 APLNMEVDKAVEANGNGLTKKSMGWFS----EEGFDSNMELPIEKLLGLDEFDGREGVES 368
            P+ ME D   +A    +    +        ++   SN ELPIE LLGL EFDG EGV+S
Sbjct: 295 VPIEME-DDIKQAKNREVAVAKLNCIHVDLLQDDIISNEELPIETLLGLGEFDGHEGVDS 353

Query: 369 EFNKDDFSLNES 404
           EFN+D F+L++S
Sbjct: 354 EFNEDVFTLDDS 365


>ref|NP_180706.2| uncharacterized protein [Arabidopsis thaliana]
           gi|67633568|gb|AAY78708.1| unknown [Arabidopsis
           thaliana] gi|330253459|gb|AEC08553.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 472

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 28/161 (17%)
 Frame = +3

Query: 9   SFRLRVQSRKMDMEKGCRRRLVF---GSGSKSSNILELKCTNGNKE-------------- 137
           S R ++Q+RK+D+++GC+R+L+F   GS SK + I EL  T  N                
Sbjct: 312 SMRAQLQTRKLDLKEGCKRKLMFNGPGSNSKPTRIPELNRTISNSSNNSSMKKTEISKNQ 371

Query: 138 ------VRRSNTMPSRLSESTKSLTKIAPLNM-----EVDKAVEANGNGLTKKSMGWFSE 284
                 V+R+ ++PSRL +S+K  +K+ P+       E+ K  +     +  +    F E
Sbjct: 372 QPIRNSVKRNKSLPSRLRKSSKISSKVVPIEAAEESGEIVKEQKTPKKLIMTRKSRTFLE 431

Query: 285 EGFDSNMELPIEKLLGLDEFDGREGVESEFNKDDFSLNESL 407
           + F    +  IEK +GL EF GREG++S+FN D F  ++SL
Sbjct: 432 DDFALMNDFSIEKAVGLCEFKGREGIDSDFNTDGFLFDDSL 472


>ref|XP_002881178.1| hypothetical protein ARALYDRAFT_482077 [Arabidopsis lyrata subsp.
           lyrata] gi|297327017|gb|EFH57437.1| hypothetical protein
           ARALYDRAFT_482077 [Arabidopsis lyrata subsp. lyrata]
          Length = 472

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 29/162 (17%)
 Frame = +3

Query: 9   SFRLRVQSRKMDMEKGCRRRLVF---GSGSKSSNILELK----------CTNGNK----- 134
           S R ++Q+RK+D+++GC+R+L+F   GS SK + I EL           CT   +     
Sbjct: 312 SMRAQLQTRKLDLKEGCKRKLMFNGHGSNSKPTRIPELNRTISTSSNNSCTKKTEISKNE 371

Query: 135 -----EVRRSNTMPSRLSESTKSLTKIAPLNMEVDKAVEANGNGLTKKSM------GWFS 281
                 V+R+ ++PSRL +S+K  +K+ P+    D+ VE      T K +        F 
Sbjct: 372 QPIRNSVKRNKSLPSRLRKSSKISSKVVPVEA-ADETVEILKEQKTPKKLIMTRKSRTFL 430

Query: 282 EEGFDSNMELPIEKLLGLDEFDGREGVESEFNKDDFSLNESL 407
           E+ F    +  IEK +GL EF GREG++S+FN D F  ++SL
Sbjct: 431 EDDFALMNDFSIEKAVGLCEFRGREGIDSDFNTDGFLFDDSL 472


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