BLASTX nr result

ID: Panax21_contig00032625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032625
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ07906.1| putative transposase [Zea luxurians]                    82   3e-14
ref|NP_001174701.1| Os06g0258800 [Oryza sativa Japonica Group] g...    79   3e-13
gb|ACF83798.1| unknown [Zea mays]                                      75   7e-12
ref|NP_001059372.2| Os07g0279200 [Oryza sativa Japonica Group] g...    74   1e-11
ref|NP_001174623.1| Os06g0170650 [Oryza sativa Japonica Group] g...    74   1e-11

>gb|AEJ07906.1| putative transposase [Zea luxurians]
          Length = 722

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
 Frame = +3

Query: 3   LIVQSGFNYLQDSIYKIRVMINYAYGSNRRIQNFRNFCHARGEKFKRAKFDNNTRWNSTY 182
           LIV+SG   L+  +   R  IN+   SN RI  F+ +C ARG + ++   D + RWNSTY
Sbjct: 340 LIVKSGMKRLKPFLEDFRTAINFLNASNSRIATFKEYCLARGVRPRKFGLDMDVRWNSTY 399

Query: 183 DLFKDVYKRKNILMEFYNT*ADHELTNQD-WDILGQLLNILKVFKKHTKILSGFYYPTIH 359
            + K +   K +   F N+  + +L   + W +  ++L  L+++   T +LSG YYPT  
Sbjct: 400 LMLKHLVPYKTVFSVFINSHYESQLLPPNHWYVAEKILEFLELYYDSTVVLSGVYYPTSP 459

Query: 360 HVLFACLEITN 392
            VL   LEI +
Sbjct: 460 LVLHHILEIAS 470


>ref|NP_001174701.1| Os06g0258800 [Oryza sativa Japonica Group]
           gi|255676901|dbj|BAH93429.1| Os06g0258800 [Oryza sativa
           Japonica Group]
          Length = 704

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
 Frame = +3

Query: 3   LIVQSGFNYLQDSIYKIRVMINYAYGSNRRIQNFRNFCHARGEKFKRAKFDNNTRWNSTY 182
           LIV++G    +  +   R  I++   SN+RI  ++N+C A+G + ++   D + RWN+TY
Sbjct: 295 LIVKAGLEVFKPMLQDFRTAISFVNASNQRIALYKNWCIAKGVRLRKFDLDMDVRWNATY 354

Query: 183 DLFKDVYKRKNILMEFYNT*ADHE-----LTNQDWDILGQLLNILKVFKKHTKILSGFYY 347
            + K ++  K +   F  T    E     LT+  W I   +L  L+ F   T ILSG YY
Sbjct: 355 LMLKHLFPHKELFSLFIETHYPRENDRLLLTDLHWTIAETVLLFLEQFYDSTVILSGVYY 414

Query: 348 PT----IHHVL 368
           PT    +HH+L
Sbjct: 415 PTSPLIMHHIL 425


>gb|ACF83798.1| unknown [Zea mays]
          Length = 187

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
 Frame = +3

Query: 3   LIVQSGFNYLQDSIYKIRVMINYAYGSNRRIQNFRNFCHARGEKFKRAKFDNNTRWNSTY 182
           LIV+SG   L+  +   R  I++   SN+RI  ++++C A   + ++   D + RWNSTY
Sbjct: 28  LIVKSGLKRLKPYVEDFRTAISFLNASNQRIAAYKSYCVAMDVRPRKFGLDMDVRWNSTY 87

Query: 183 DLFKDVYKRKNILMEFYNT*ADHE-----LTNQDWDILGQLLNILKVFKKHTKILSGFYY 347
            + K V   K     F  T          LT   W+I  ++L  L++F   T  LSG YY
Sbjct: 88  LMLKHVIPYKTTFSVFIQTHYQQVMGQTLLTQAHWEIGEKILTFLELFYDSTVALSGIYY 147

Query: 348 PT----IHHVLFACLEITNMFQD 404
           PT    +HH++     ++N   D
Sbjct: 148 PTSPLMLHHIIEIASHLSNYEND 170


>ref|NP_001059372.2| Os07g0279200 [Oryza sativa Japonica Group]
           gi|255677670|dbj|BAF21286.2| Os07g0279200 [Oryza sativa
           Japonica Group]
          Length = 772

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
 Frame = +3

Query: 3   LIVQSGFNYLQDSIYKIRVMINYAYGSNRRIQNFRNFCHARGEKFKRAKFDNNTRWNSTY 182
           LIV++G    +  +   R  I++   SN+RI  ++NFC A+G + ++   D + RWN+TY
Sbjct: 328 LIVKAGLEIFKPMLQDFRTAISFINASNQRIALYKNFCIAKGIRPRKFGLDMDVRWNATY 387

Query: 183 DLFKDVYKRKNILMEF---YNT*ADHE--LTNQDWDILGQLLNILKVFKKHTKILSGFYY 347
            + K +   + I   F   ++  AD +  LT+  W I   +L  L+ F   T ILSG YY
Sbjct: 388 LMLKHLLPHRVIFSVFIASHHPMADGQPLLTDLHWTIAETVLLFLEQFYDSTVILSGVYY 447

Query: 348 PT----IHHVL 368
           PT    +HH+L
Sbjct: 448 PTSPLIMHHIL 458


>ref|NP_001174623.1| Os06g0170650 [Oryza sativa Japonica Group]
           gi|255676758|dbj|BAH93351.1| Os06g0170650 [Oryza sativa
           Japonica Group]
          Length = 756

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
 Frame = +3

Query: 3   LIVQSGFNYLQDSIYKIRVMINYAYGSNRRIQNFRNFCHARGEKFKRAKFDNNTRWNSTY 182
           LIV++G    +  +   R  I++   SN+RI  ++NFC A+G + ++   D + RWN+TY
Sbjct: 328 LIVKAGLEIFKPMLQDFRTAISFINASNQRIALYKNFCIAKGIRPRKFGLDMDVRWNATY 387

Query: 183 DLFKDVYKRKNILMEF---YNT*ADHE--LTNQDWDILGQLLNILKVFKKHTKILSGFYY 347
            + K +   + I   F   ++  AD +  LT+  W I   +L  L+ F   T ILSG YY
Sbjct: 388 LMLKHLLPHRVIFSVFIASHHPMADGQPLLTDLHWTIAETVLLFLEQFYDSTVILSGVYY 447

Query: 348 PT----IHHVL 368
           PT    +HH+L
Sbjct: 448 PTSPLIMHHIL 458


Top