BLASTX nr result

ID: Panax21_contig00032621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032621
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267...    74   1e-11
emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]    74   2e-11
ref|XP_002521085.1| DNA binding protein, putative [Ricinus commu...    64   1e-08
ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Popu...    64   1e-08
emb|CBI37340.3| unnamed protein product [Vitis vinifera]               57   1e-06

>ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267035 [Vitis vinifera]
          Length = 2022

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 15/132 (11%)
 Frame = -2

Query: 352 SSSTDVVPSRGGH-ASFASRHVPRDAKGLVVDA--DNHKDHIVSSKSNLKATSPNCSMAP 182
           SSS D+VPSRGGH +S  +RH  RDAKG + +   +N KDH VS  S+ K+ S N  +  
Sbjct: 201 SSSADIVPSRGGHGSSLPARHGSRDAKGSISETNFNNQKDHNVSPISDPKSISSNGDVVF 260

Query: 181 KVELHDSRLD--LEVVQAVESAIGITKGSLSDA----------NQLNQFSESDSQRTPVY 38
           KV   +++LD  L+ V+AVE+   +TKGS+ +           NQ  Q  + D Q+T   
Sbjct: 261 KVVAPENQLDMVLDSVRAVEATSSLTKGSVPETNFDTTSSKWDNQHIQSVQVDIQQTLTD 320

Query: 37  MAPGKPESLGDR 2
           +A   P+ +G R
Sbjct: 321 VASADPDPVGGR 332


>emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]
          Length = 2257

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 15/132 (11%)
 Frame = -2

Query: 352 SSSTDVVPSRGGH-ASFASRHVPRDAKGLVVDA--DNHKDHIVSSKSNLKATSPNCSMAP 182
           SSS D++PSRGGH +S  +RH  RDAKG + +   +N KDH VS  S+ K+ S N  +  
Sbjct: 201 SSSADIIPSRGGHGSSLPARHGSRDAKGSISETNFNNQKDHNVSPISDPKSISSNGDVVF 260

Query: 181 KVELHDSRLD--LEVVQAVESAIGITKGSLSDA----------NQLNQFSESDSQRTPVY 38
           KV   +++LD  L+ V+AVE+   +TKGS+ +           NQ  Q  + D Q+T   
Sbjct: 261 KVVAPENQLDMVLDSVRAVEATSSLTKGSVPETNFDTTSSKWDNQHIQSVQVDIQQTLTD 320

Query: 37  MAPGKPESLGDR 2
           +A   P+ +G R
Sbjct: 321 VASADPDPVGGR 332


>ref|XP_002521085.1| DNA binding protein, putative [Ricinus communis]
           gi|223539654|gb|EEF41236.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 2009

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 17/134 (12%)
 Frame = -2

Query: 352 SSSTDVVPSRGGHASFASRHVP-RDAKGLVVDADNHKDHIVSSKSNLKATSPNCSMAPKV 176
           SSSTDVV S GGH S    H   RDAKG + + ++ KD ++ S    K+T+ N  M  ++
Sbjct: 199 SSSTDVVQSSGGHGSLLQVHAGLRDAKGPISETNHQKDRMIPSSLYPKSTTSNGDMVSQI 258

Query: 175 ELHD--SRLDLEVVQAVESAIGITKG--------------SLSDANQLNQFSESDSQRTP 44
           E+ +  S ++L+  QA E+     K               S  D +  N  S+   Q+ P
Sbjct: 259 EIKNTQSNMELDGAQAPEAIASPPKPSPLENRSDVMEANISRDDQHDKNNLSKVHDQKAP 318

Query: 43  VYMAPGKPESLGDR 2
           + MA G  + +GD+
Sbjct: 319 INMASGHSDHVGDK 332


>ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Populus trichocarpa]
           gi|222844768|gb|EEE82315.1| hypothetical protein
           POPTRDRAFT_756271 [Populus trichocarpa]
          Length = 2006

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 10/113 (8%)
 Frame = -2

Query: 352 SSSTDVVPSRGGH-ASFASRHVPRDAKGLVVDADNHKDHIVSSKSNLKATSPNCSMAPKV 176
           SSSTD+V S  GH +S  +R   RD KGLV + D+HK  I++S SN K+T+ N  +  ++
Sbjct: 200 SSSTDIVQSSVGHGSSLPARGEARDVKGLVTETDDHKAQIITSISNPKSTTSNGDLFFQI 259

Query: 175 ELHD--SRLDLEVVQAVESAIG-------ITKGSLSDANQLNQFSESDSQRTP 44
           +  +  S  +L+ VQA+++ +        +T+  +   NQ +Q SE+D+++ P
Sbjct: 260 DTSNTQSNTELDCVQALKTVVNLPDDRLDVTESIVLRDNQHDQPSEADAEKAP 312


>emb|CBI37340.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 21/122 (17%)
 Frame = -2

Query: 352 SSSTDVVPSRGGH-ASFASRHVPRDAKGLVVDA--DNHKDHIVSSKSNLKATSPNCSMAP 182
           SSS D+VPSRGGH +S  +RH  RDAKG + +   +N KDH VS  S+ K+ S N  +  
Sbjct: 201 SSSADIVPSRGGHGSSLPARHGSRDAKGSISETNFNNQKDHNVSPISDPKSISSNGDVVF 260

Query: 181 KVELHDSRLDL--------------EVVQA----VESAIGITKGSLSDANQLNQFSESDS 56
           KV   +++LD+               VV A    + SA  +   + + + QLN FS    
Sbjct: 261 KVVAPENQLDMVLDSVRAWDNQHIQSVVSAGPECLPSAATVKSENETSSGQLNGFSNLKR 320

Query: 55  QR 50
           +R
Sbjct: 321 ER 322


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