BLASTX nr result
ID: Panax21_contig00032618
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00032618 (453 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI40586.3| unnamed protein product [Vitis vinifera] 112 2e-23 ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III s... 112 2e-23 ref|XP_004158339.1| PREDICTED: DNA-directed RNA polymerase III s... 100 1e-19 ref|XP_004141147.1| PREDICTED: DNA-directed RNA polymerase III s... 100 1e-19 gb|AFK43219.1| unknown [Lotus japonicus] 94 9e-18 >emb|CBI40586.3| unnamed protein product [Vitis vinifera] Length = 175 Score = 112 bits (281), Expect = 2e-23 Identities = 48/60 (80%), Positives = 53/60 (88%) Frame = +3 Query: 3 IEPVFSKDDMKNAPTTEATCPNCRFGKAAFYQIQIRSADEPMSTFYLCLNEDCGHQWRED 182 IEP+FSKDDMKN PTT+ATCP+C FGKA F Q+Q RSADEPMSTFY CLNE+CG QWRED Sbjct: 116 IEPIFSKDDMKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRED 175 >ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Vitis vinifera] Length = 111 Score = 112 bits (281), Expect = 2e-23 Identities = 48/60 (80%), Positives = 53/60 (88%) Frame = +3 Query: 3 IEPVFSKDDMKNAPTTEATCPNCRFGKAAFYQIQIRSADEPMSTFYLCLNEDCGHQWRED 182 IEP+FSKDDMKN PTT+ATCP+C FGKA F Q+Q RSADEPMSTFY CLNE+CG QWRED Sbjct: 52 IEPIFSKDDMKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRED 111 >ref|XP_004158339.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Cucumis sativus] Length = 112 Score = 100 bits (249), Expect = 1e-19 Identities = 43/60 (71%), Positives = 49/60 (81%) Frame = +3 Query: 3 IEPVFSKDDMKNAPTTEATCPNCRFGKAAFYQIQIRSADEPMSTFYLCLNEDCGHQWRED 182 +EP+ S DDMKNA TEATCPNC FGKAAF QIQ+RSADEP +TFY C+NE+C WRED Sbjct: 53 LEPIISDDDMKNAAQTEATCPNCAFGKAAFIQIQLRSADEPATTFYKCMNENCRQNWRED 112 >ref|XP_004141147.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Cucumis sativus] Length = 111 Score = 100 bits (249), Expect = 1e-19 Identities = 43/60 (71%), Positives = 49/60 (81%) Frame = +3 Query: 3 IEPVFSKDDMKNAPTTEATCPNCRFGKAAFYQIQIRSADEPMSTFYLCLNEDCGHQWRED 182 +EP+ S DDMKNA TEATCPNC FGKAAF QIQ+RSADEP +TFY C+NE+C WRED Sbjct: 52 LEPIISDDDMKNAAQTEATCPNCAFGKAAFIQIQLRSADEPATTFYKCMNENCRQNWRED 111 >gb|AFK43219.1| unknown [Lotus japonicus] Length = 111 Score = 94.4 bits (233), Expect = 9e-18 Identities = 41/60 (68%), Positives = 46/60 (76%) Frame = +3 Query: 3 IEPVFSKDDMKNAPTTEATCPNCRFGKAAFYQIQIRSADEPMSTFYLCLNEDCGHQWRED 182 I+PV S DDMKN PTTE CPNC KAA+ ++QIRSADEP + FY CLNE C HQWRED Sbjct: 52 IDPVISYDDMKNGPTTEVRCPNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRED 111