BLASTX nr result

ID: Panax21_contig00032610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00032610
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527258.1| transcription factor, putative [Ricinus comm...    86   3e-15
ref|XP_002302890.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_002535687.1| transcription factor, putative [Ricinus comm...    74   1e-11
ref|XP_003632050.1| PREDICTED: uncharacterized protein LOC100254...    71   1e-10
emb|CAN60334.1| hypothetical protein VITISV_033284 [Vitis vinifera]    71   1e-10

>ref|XP_002527258.1| transcription factor, putative [Ricinus communis]
           gi|223533351|gb|EEF35102.1| transcription factor,
           putative [Ricinus communis]
          Length = 169

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 60/147 (40%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
 Frame = +2

Query: 2   IKTRFTYRFLRSLKALNN---KNNXXXXXXXXXXXREIYTRSNRVKLAANVSMAAAVGSK 172
           +K+RFT  FLRSL  +N    +NN            E + R +RVK AA+ S+A AVG +
Sbjct: 14  LKSRFTKGFLRSLLKINRQRVRNNIPSCSSPG----EFFERCHRVKTAADKSLAFAVGRR 69

Query: 173 RAWSRAIIWKFIKNRNMRRHHHAVIMK-IRRRRSVSINGNPKKKKGENRRRCGKAAKELQ 349
           RAWSRA+++K       RR  H V++K I   ++  I    K++  +      +A+K L+
Sbjct: 70  RAWSRAMLFKIRNRARRRRRQHCVLVKRINHHQAKKIICLKKEQINDEEAGFDQASK-LR 128

Query: 350 KLVIPGGKGIMEIESLLDETAHYIKCL 430
           KLV PG +G M++ SLLDE AHYI+CL
Sbjct: 129 KLV-PGSEG-MDLCSLLDEAAHYIECL 153


>ref|XP_002302890.1| predicted protein [Populus trichocarpa] gi|222844616|gb|EEE82163.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 59/146 (40%), Positives = 78/146 (53%), Gaps = 3/146 (2%)
 Frame = +2

Query: 2   IKTRFTYRFLRSLKALNNKNNXXXXXXXXXXXREIYTRSNRVKLAANVSMAAAVGSKRAW 181
           IKTRF  RFLRSL  +   +            +     ++R+K+AA  SMA AVG  R W
Sbjct: 15  IKTRFASRFLRSLLRMKRSDRFGGSQSNEGVRKR---STHRIKIAAYASMARAVGPSRTW 71

Query: 182 SRAIIWKFIKNRNMRRHHHAVIMKIRRRRSVSINGNPKKKKGENR---RRCGKAAKELQK 352
           SRA+++K ++NR       A I  + R+R      N KK+   N+    R       L+K
Sbjct: 72  SRALLFK-LRNR-------ARIQGVLRKRCFVSKKNKKKRVIRNKVIISREPSRTDTLRK 123

Query: 353 LVIPGGKGIMEIESLLDETAHYIKCL 430
           LV PGG G M+I  LL+ETAHYIKCL
Sbjct: 124 LV-PGG-GSMDICCLLEETAHYIKCL 147


>ref|XP_002535687.1| transcription factor, putative [Ricinus communis]
           gi|223522280|gb|EEF26696.1| transcription factor,
           putative [Ricinus communis]
          Length = 164

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
 Frame = +2

Query: 5   KTRFTYRFLRSLKALNN-KNNXXXXXXXXXXXREIYTRSNRVKLAANVSMAAAVGSKRAW 181
           KTRFT RFL SL  +    NN            EI  RS+R+K+A+  SMA AVGS+R W
Sbjct: 16  KTRFTRRFLASLLRMRRANNNSNTRVGYASSHEEIRRRSHRIKIASYSSMARAVGSRRVW 75

Query: 182 SRAIIWKFIKNRNMRRHHHAVIMKIRRRRSVSINGNPKKKKGENRRRCGKAAK-ELQKLV 358
           SRA++ K ++NR       A +  I R +  ++    K+K     +  G+ +K +  + +
Sbjct: 76  SRALLLK-LRNR-------AKLQGILRNKCFAL--KKKRKLMVKSKVPGEMSKADTLRTL 125

Query: 359 IPGGKGIMEIESLLDETAHYIKCL 430
           +PGG+  M+   LL+ETA Y+KCL
Sbjct: 126 VPGGE-TMDFCKLLEETASYMKCL 148


>ref|XP_003632050.1| PREDICTED: uncharacterized protein LOC100254977 [Vitis vinifera]
          Length = 148

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 52/142 (36%), Positives = 73/142 (51%)
 Frame = +2

Query: 5   KTRFTYRFLRSLKALNNKNNXXXXXXXXXXXREIYTRSNRVKLAANVSMAAAVGSKRAWS 184
           K R   RFL+SL  +  +              E+  RS R+K+AA  SMA  VGS+RAWS
Sbjct: 14  KARCARRFLQSLLRIRQRR------PGSLSSEEVRQRSRRIKMAAYSSMACTVGSRRAWS 67

Query: 185 RAIIWKFIKNRNMRRHHHAVIMKIRRRRSVSINGNPKKKKGENRRRCGKAAKELQKLVIP 364
           RAII++       R   H  +    RRR + +   P ++  +        A  L+ LV P
Sbjct: 68  RAIIFRL----QSRAGRHGRM----RRRCLGVKKKPSREMSQ--------ADRLRDLV-P 110

Query: 365 GGKGIMEIESLLDETAHYIKCL 430
           GG+  ++  +LL+ETAHYIKCL
Sbjct: 111 GGEA-LDFCNLLEETAHYIKCL 131


>emb|CAN60334.1| hypothetical protein VITISV_033284 [Vitis vinifera]
          Length = 148

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 52/142 (36%), Positives = 73/142 (51%)
 Frame = +2

Query: 5   KTRFTYRFLRSLKALNNKNNXXXXXXXXXXXREIYTRSNRVKLAANVSMAAAVGSKRAWS 184
           K R   RFL+SL  +  +              E+  RS R+K+AA  SMA  VGS+RAWS
Sbjct: 14  KVRCARRFLQSLLRIRQRR------PGSLSSEEVRQRSRRIKMAAYSSMACTVGSRRAWS 67

Query: 185 RAIIWKFIKNRNMRRHHHAVIMKIRRRRSVSINGNPKKKKGENRRRCGKAAKELQKLVIP 364
           RAII++       R   H  +    RRR + +   P ++  +        A  L+ LV P
Sbjct: 68  RAIIFRL----QSRAGRHGRM----RRRCLGVKKKPSREMSQ--------ADRLRDLV-P 110

Query: 365 GGKGIMEIESLLDETAHYIKCL 430
           GG+  ++  +LL+ETAHYIKCL
Sbjct: 111 GGEA-LDFCNLLEETAHYIKCL 131


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